RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ZDHHC13Q8IUH4 622 aa1.7□□□□□ -2.14
RNU6-542P-201ENST00000516405 SULF1Q8IWU6 871 aa1.7□□□□□ -2.14
RNU6-542P-201ENST00000516405 NDFIP2Q9NV92 336 aa1.7□□□□□ -2.14
RNU6-542P-201ENST00000516405 HCN2Q9UL51 889 aa1.7□□□□□ -2.14
RNU6-542P-201ENST00000516405 ATXN7L1Q9ULK2 861 aaPredicted RBP1.7□□□□□ -2.14
RNU6-542P-201ENST00000516405 BNIP3LO60238 219 aa1.69□□□□□ -2.14
RNU6-542P-201ENST00000516405 KDM4AO75164 1064 aa1.69□□□□□ -2.14
RNU6-542P-201ENST00000516405 FARP2O94887 1054 aaPredicted RBP1.69□□□□□ -2.14
RNU6-542P-201ENST00000516405 NID1P14543 1247 aa1.69□□□□□ -2.14
RNU6-542P-201ENST00000516405 ADD1P35611 737 aaKnown RBP1.69□□□□□ -2.14
RNU6-542P-201ENST00000516405 AGERQ15109 404 aa1.69□□□□□ -2.14
RNU6-542P-201ENST00000516405 PKN1Q16512 942 aa1.69□□□□□ -2.14
RNU6-542P-201ENST00000516405 SIAH1Q8IUQ4 282 aa1.69□□□□□ -2.14
RNU6-542P-201ENST00000516405 TRMT44Q8IYL2 757 aaKnown RBP1.69□□□□□ -2.14
RNU6-542P-201ENST00000516405 MEGF10Q96KG7 1140 aa1.69□□□□□ -2.14
RNU6-542P-201ENST00000516405 MYRFLQ96LU7 910 aa1.69□□□□□ -2.14
RNU6-542P-201ENST00000516405 ARIH1Q9Y4X5 557 aaPredicted RBP1.69□□□□□ -2.14
RNU6-542P-201ENST00000516405 MEGF11A6BM72 1044 aa1.68□□□□□ -2.14
RNU6-542P-201ENST00000516405 HOXA2O43364 376 aa1.68□□□□□ -2.14
RNU6-542P-201ENST00000516405 INHBBP09529 407 aa1.68□□□□□ -2.14
RNU6-542P-201ENST00000516405 ADH6P28332 368 aa1.68□□□□□ -2.14
RNU6-542P-201ENST00000516405 BPHLQ86WA6 291 aaPredicted RBP1.68□□□□□ -2.14
RNU6-542P-201ENST00000516405 CRELD1Q96HD1 420 aa1.68□□□□□ -2.14
RNU6-542P-201ENST00000516405 CARMIL2Q6F5E8 1435 aa1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 M0R082 166 aa1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 PAPLNO95428 1278 aa1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 ADH1AP07327 375 aa1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 ZSCAN22P10073 491 aaPredicted RBP1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 CHGAP10645 457 aaKnown RBP1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 IREB2P48200 963 aaKnown RBP1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 KRTAP10-7P60409 375 aaPredicted RBP1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 KRTAP10-9P60411 292 aa1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 NFKB2Q00653 900 aa1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 HNRNPA0Q13151 305 aaKnown RBP1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 NBPF14Q5TI25 921 aa1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 NBPF10Q6P3W6 841 aaKnown RBP1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 NBPF15Q8N660 670 aa1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 ZNF417Q8TAU3 575 aa1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 WFDC12Q8WWY7 111 aa1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 ZNF587Q96SQ5 575 aaPredicted RBP1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 PHOX2BQ99453 314 aa1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 MDFIQ99750 246 aa1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 FAM53CQ9NYF3 392 aa1.67□□□□□ -2.14
RNU6-542P-201ENST00000516405 A0A0A0MRY4 1105 aa1.66□□□□□ -2.14
RNU6-542P-201ENST00000516405 PRR19A6NJB7 356 aa1.66□□□□□ -2.14
RNU6-542P-201ENST00000516405 CD46P15529 392 aa1.66□□□□□ -2.14
RNU6-542P-201ENST00000516405 NOS3P29474 1203 aa1.66□□□□□ -2.14
RNU6-542P-201ENST00000516405 TMEM132AQ24JP5 1023 aa1.66□□□□□ -2.14
RNU6-542P-201ENST00000516405 INTS5Q6P9B9 1019 aaKnown RBP1.66□□□□□ -2.14
RNU6-542P-201ENST00000516405 NFXL1Q6ZNB6 911 aa1.66□□□□□ -2.14
RNU6-542P-201ENST00000516405 KSR1Q8IVT5 923 aa1.66□□□□□ -2.14
RNU6-542P-201ENST00000516405 RELTQ969Z4 430 aa1.66□□□□□ -2.14
RNU6-542P-201ENST00000516405 GPAMQ9HCL2 828 aa1.66□□□□□ -2.14
RNU6-542P-201ENST00000516405 PRDM6Q9NQX0 595 aa1.66□□□□□ -2.14
RNU6-542P-201ENST00000516405 TMPRSS4Q9NRS4 437 aa1.66□□□□□ -2.14
RNU6-542P-201ENST00000516405 USP21Q9UK80 565 aa1.66□□□□□ -2.14
RNU6-542P-201ENST00000516405 STARD13Q9Y3M8 1113 aa1.66□□□□□ -2.14
RNU6-542P-201ENST00000516405 LILRA1O75019 489 aa1.65□□□□□ -2.15
RNU6-542P-201ENST00000516405 IGLV1-40P01703 118 aa1.65□□□□□ -2.15
RNU6-542P-201ENST00000516405 CTHP32929 405 aa1.65□□□□□ -2.15
RNU6-542P-201ENST00000516405 PCBP4P57723 403 aaKnown RBP1.65□□□□□ -2.15
RNU6-542P-201ENST00000516405 LRRC56Q8IYG6 542 aaPredicted RBP1.65□□□□□ -2.15
RNU6-542P-201ENST00000516405 TOX2Q96NM4 488 aa1.65□□□□□ -2.15
RNU6-542P-201ENST00000516405 TIMMDC1Q9NPL8 285 aa1.65□□□□□ -2.15
RNU6-542P-201ENST00000516405 MAP10Q9P2G4 905 aa1.65□□□□□ -2.15
RNU6-542P-201ENST00000516405 PCDHGC3Q9UN70 934 aa1.65□□□□□ -2.15
RNU6-542P-201ENST00000516405 ELOA3CA0A087WX78 387 aaPredicted RBP1.64□□□□□ -2.15
RNU6-542P-201ENST00000516405 ELOA3DA6NLF2 546 aaPredicted RBP1.64□□□□□ -2.15
RNU6-542P-201ENST00000516405 HOXA5P20719 270 aa1.64□□□□□ -2.15
RNU6-542P-201ENST00000516405 GRNP28799 593 aaKnown RBP1.64□□□□□ -2.15
RNU6-542P-201ENST00000516405 USP46P62068 366 aa1.64□□□□□ -2.15
RNU6-542P-201ENST00000516405 MESP2Q0VG99 397 aa1.64□□□□□ -2.15
RNU6-542P-201ENST00000516405 ELOA3BQ3SY89 546 aa1.64□□□□□ -2.15
RNU6-542P-201ENST00000516405 TRAPPC3LQ5T215 181 aa1.64□□□□□ -2.15
RNU6-542P-201ENST00000516405 ZNF784Q8NCA9 323 aaPredicted RBP1.64□□□□□ -2.15
RNU6-542P-201ENST00000516405 ELOA3Q8NG57 546 aa1.64□□□□□ -2.15
RNU6-542P-201ENST00000516405 SPATA31C2B4DYI2 1134 aa1.63□□□□□ -2.15
RNU6-542P-201ENST00000516405 AKAP8O43823 692 aaKnown RBP1.63□□□□□ -2.15
RNU6-542P-201ENST00000516405 FOXD2O60548 495 aaPredicted RBP1.63□□□□□ -2.15
RNU6-542P-201ENST00000516405 F12P00748 615 aaPredicted RBP1.63□□□□□ -2.15
RNU6-542P-201ENST00000516405 ALBP02768 609 aa1.63□□□□□ -2.15
RNU6-542P-201ENST00000516405 TGM1P22735 817 aa1.63□□□□□ -2.15
RNU6-542P-201ENST00000516405 GPC1P35052 558 aa1.63□□□□□ -2.15
RNU6-542P-201ENST00000516405 GRIK1P39086 918 aa1.63□□□□□ -2.15
RNU6-542P-201ENST00000516405 MLLT3P42568 568 aaPredicted RBP1.63□□□□□ -2.15
RNU6-542P-201ENST00000516405 WDR44Q5JSH3 913 aa1.63□□□□□ -2.15
RNU6-542P-201ENST00000516405 DZIP1LQ8IYY4 767 aaKnown RBP1.63□□□□□ -2.15
RNU6-542P-201ENST00000516405 ZSCAN18Q8TBC5 510 aaPredicted RBP1.63□□□□□ -2.15
RNU6-542P-201ENST00000516405 GRIP2Q9C0E4 1043 aa1.63□□□□□ -2.15
RNU6-542P-201ENST00000516405 RUBCNLQ9H714 662 aa1.63□□□□□ -2.15
RNU6-542P-201ENST00000516405 MAGEB6P1A0A0J9YX57 407 aa1.62□□□□□ -2.15
RNU6-542P-201ENST00000516405 C6orf229H3BNL8 230 aa1.62□□□□□ -2.15
RNU6-542P-201ENST00000516405 DHX9Q08211 1270 aaKnown RBP1.62□□□□□ -2.15
RNU6-542P-201ENST00000516405 INTS6LQ5JSJ4 861 aaKnown RBP1.62□□□□□ -2.15
RNU6-542P-201ENST00000516405 SH3BP5LQ7L8J4 393 aa1.62□□□□□ -2.15
RNU6-542P-201ENST00000516405 KCTD15Q96SI1 283 aaPredicted RBP1.62□□□□□ -2.15
RNU6-542P-201ENST00000516405 SLC38A3Q99624 504 aa1.62□□□□□ -2.15
RNU6-542P-201ENST00000516405 NUTM2FA1L443 756 aa1.61□□□□□ -2.15
RNU6-542P-201ENST00000516405 ATP5J2-PTCD1G3V325 749 aa1.61□□□□□ -2.15
RNU6-542P-201ENST00000516405 WASLO00401 505 aaPredicted RBP1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 468.2 ms