RNA–Protein interactions for RNA: ENST00000516227.1

RN7SKP288-201, Transcript of RNA, 7SK small nuclear pseudogene 288, humanhuman

BASIC

Gene RN7SKP288, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP288-201ENST00000516227 MEGF6O75095 1541 aa7.57□□□□□ -1.2
RN7SKP288-201ENST00000516227 PAPPAQ13219 1627 aa7.57□□□□□ -1.2
RN7SKP288-201ENST00000516227 CASZ1Q86V15 1759 aa7.57□□□□□ -1.2
RN7SKP288-201ENST00000516227 BTBD11A6QL63 1104 aa7.57□□□□□ -1.2
RN7SKP288-201ENST00000516227 BRPF1P55201 1214 aaPredicted RBP7.57□□□□□ -1.2
RN7SKP288-201ENST00000516227 ARHGAP45Q92619 1136 aa7.57□□□□□ -1.2
RN7SKP288-201ENST00000516227 NECTIN2Q92692 538 aa7.57□□□□□ -1.2
RN7SKP288-201ENST00000516227 API5Q9BZZ5 524 aaKnown RBP7.57□□□□□ -1.2
RN7SKP288-201ENST00000516227 CHMP4BQ9H444 224 aaKnown RBP7.57□□□□□ -1.2
RN7SKP288-201ENST00000516227 STRN4Q9NRL3 753 aa7.57□□□□□ -1.2
RN7SKP288-201ENST00000516227 BABAM1Q9NWV8 329 aa7.57□□□□□ -1.2
RN7SKP288-201ENST00000516227 OVOS2A0A0G2JMS6 1433 aa7.57□□□□□ -1.2
RN7SKP288-201ENST00000516227 ANKRD36CQ5JPF3 1778 aa7.56□□□□□ -1.2
RN7SKP288-201ENST00000516227 COL5A2P05997 1499 aaPredicted RBP7.56□□□□□ -1.2
RN7SKP288-201ENST00000516227 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.56□□□□□ -1.2
RN7SKP288-201ENST00000516227 SLC4A2P04920 1241 aa7.56□□□□□ -1.2
RN7SKP288-201ENST00000516227 CCDC30Q5VVM6 783 aa7.56□□□□□ -1.2
RN7SKP288-201ENST00000516227 RWDD1Q9H446 243 aaPredicted RBP7.56□□□□□ -1.2
RN7SKP288-201ENST00000516227 CEMIPQ8WUJ3 1361 aa7.56□□□□□ -1.2
RN7SKP288-201ENST00000516227 WDR17Q8IZU2 1322 aa7.55□□□□□ -1.2
RN7SKP288-201ENST00000516227 KDM2BQ8NHM5 1336 aa7.55□□□□□ -1.2
RN7SKP288-201ENST00000516227 SBF2Q86WG5 1849 aa7.55□□□□□ -1.2
RN7SKP288-201ENST00000516227 IGHDP01880 384 aa7.55□□□□□ -1.2
RN7SKP288-201ENST00000516227 RGS3P49796 1198 aa7.55□□□□□ -1.2
RN7SKP288-201ENST00000516227 PIP4K2BP78356 416 aa7.55□□□□□ -1.2
RN7SKP288-201ENST00000516227 IFNL2Q8IZJ0 200 aa7.55□□□□□ -1.2
RN7SKP288-201ENST00000516227 NUP188Q5SRE5 1749 aa7.55□□□□□ -1.2
RN7SKP288-201ENST00000516227 TUBGCP6Q96RT7 1819 aa7.55□□□□□ -1.2
RN7SKP288-201ENST00000516227 PTPRCP08575 1304 aa7.54□□□□□ -1.2
RN7SKP288-201ENST00000516227 TOM1O60784 492 aa7.54□□□□□ -1.2
RN7SKP288-201ENST00000516227 EIF2S2P20042 333 aaKnown RBP7.54□□□□□ -1.2
RN7SKP288-201ENST00000516227 CHMP4AQ9BY43 222 aa7.54□□□□□ -1.2
RN7SKP288-201ENST00000516227 PCDHB15Q9Y5E8 787 aa7.54□□□□□ -1.2
RN7SKP288-201ENST00000516227 ABCC4O15439 1325 aa7.53□□□□□ -1.2
RN7SKP288-201ENST00000516227 SOS1Q07889 1333 aaPredicted RBP7.53□□□□□ -1.2
RN7SKP288-201ENST00000516227 HSP90AB1P08238 724 aaKnown RBP7.53□□□□□ -1.2
RN7SKP288-201ENST00000516227 IL2RBP14784 551 aa7.53□□□□□ -1.2
RN7SKP288-201ENST00000516227 PHKG2P15735 406 aa7.53□□□□□ -1.2
RN7SKP288-201ENST00000516227 HDGFL1Q5TGJ6 251 aa7.53□□□□□ -1.2
RN7SKP288-201ENST00000516227 SLC4A10Q6U841 1118 aa7.53□□□□□ -1.2
RN7SKP288-201ENST00000516227 SKAP1Q86WV1 359 aa7.53□□□□□ -1.2
RN7SKP288-201ENST00000516227 ZCRB1Q8TBF4 217 aaKnown RBP7.53□□□□□ -1.2
RN7SKP288-201ENST00000516227 BTG4Q9NY30 223 aa7.53□□□□□ -1.2
RN7SKP288-201ENST00000516227 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.53□□□□□ -1.2
RN7SKP288-201ENST00000516227 USP35Q9P2H5 1018 aa7.53□□□□□ -1.2
RN7SKP288-201ENST00000516227 RBM19Q9Y4C8 960 aaKnown RBP7.53□□□□□ -1.2
RN7SKP288-201ENST00000516227 PCDH11XQ9BZA7 1347 aa7.52□□□□□ -1.2
RN7SKP288-201ENST00000516227 PCDH11YQ9BZA8 1340 aa7.52□□□□□ -1.2
RN7SKP288-201ENST00000516227 KDM6AO15550 1401 aaPredicted RBP7.52□□□□□ -1.2
RN7SKP288-201ENST00000516227 SPEF2Q9C093 1822 aa7.52□□□□□ -1.2
RN7SKP288-201ENST00000516227 PLEKHG2Q9H7P9 1386 aa7.52□□□□□ -1.21
RN7SKP288-201ENST00000516227 NUTM2BA6NNL0 878 aaPredicted RBP7.52□□□□□ -1.21
RN7SKP288-201ENST00000516227 NUTM2EB1AL46 878 aaPredicted RBP7.52□□□□□ -1.21
RN7SKP288-201ENST00000516227 KCNQ3O43525 872 aa7.52□□□□□ -1.21
RN7SKP288-201ENST00000516227 CABP4P57796 275 aa7.52□□□□□ -1.21
RN7SKP288-201ENST00000516227 EIF4A1P60842 406 aaKnown RBP7.52□□□□□ -1.21
RN7SKP288-201ENST00000516227 FKBP5Q13451 457 aaPredicted RBP7.52□□□□□ -1.21
RN7SKP288-201ENST00000516227 LARP1Q6PKG0 1096 aaKnown RBP7.52□□□□□ -1.21
RN7SKP288-201ENST00000516227 G2E3Q7L622 706 aa7.52□□□□□ -1.21
RN7SKP288-201ENST00000516227 NUTM2AQ8IVF1 878 aaPredicted RBP7.52□□□□□ -1.21
RN7SKP288-201ENST00000516227 CARD10Q9BWT7 1032 aa7.52□□□□□ -1.21
RN7SKP288-201ENST00000516227 SLC52A2Q9HAB3 445 aa7.52□□□□□ -1.21
RN7SKP288-201ENST00000516227 MRC1P22897 1456 aa7.51□□□□□ -1.21
RN7SKP288-201ENST00000516227 BRWD3Q6RI45 1802 aa7.51□□□□□ -1.21
RN7SKP288-201ENST00000516227 UBAP1LF5GYI3 381 aa7.51□□□□□ -1.21
RN7SKP288-201ENST00000516227 ZBTB7BO15156 539 aaPredicted RBP7.51□□□□□ -1.21
RN7SKP288-201ENST00000516227 ADAMTS2O95450 1211 aa7.51□□□□□ -1.21
RN7SKP288-201ENST00000516227 FLIIQ13045 1269 aa7.51□□□□□ -1.21
RN7SKP288-201ENST00000516227 INTS3Q68E01 1043 aaKnown RBP7.51□□□□□ -1.21
RN7SKP288-201ENST00000516227 TTC5Q8N0Z6 440 aa7.51□□□□□ -1.21
RN7SKP288-201ENST00000516227 NFATC2IPQ8NCF5 419 aa7.51□□□□□ -1.21
RN7SKP288-201ENST00000516227 DDX54Q8TDD1 881 aaKnown RBP7.51□□□□□ -1.21
RN7SKP288-201ENST00000516227 DCAF5Q96JK2 942 aa7.51□□□□□ -1.21
RN7SKP288-201ENST00000516227 C1orf115Q9H7X2 142 aa7.51□□□□□ -1.21
RN7SKP288-201ENST00000516227 ZBTB40Q9NUA8 1239 aa7.51□□□□□ -1.21
RN7SKP288-201ENST00000516227 PDZRN3Q9UPQ7 1066 aa7.51□□□□□ -1.21
RN7SKP288-201ENST00000516227 RGS12O14924 1447 aa7.51□□□□□ -1.21
RN7SKP288-201ENST00000516227 MYH7P12883 1935 aa7.5□□□□□ -1.21
RN7SKP288-201ENST00000516227 TAF1LQ8IZX4 1826 aa7.5□□□□□ -1.21
RN7SKP288-201ENST00000516227 PXDNLA1KZ92 1463 aa7.5□□□□□ -1.21
RN7SKP288-201ENST00000516227 F6X3S4 739 aa7.5□□□□□ -1.21
RN7SKP288-201ENST00000516227 CYP27B1O15528 508 aa7.5□□□□□ -1.21
RN7SKP288-201ENST00000516227 HOXB7P09629 217 aa7.5□□□□□ -1.21
RN7SKP288-201ENST00000516227 CCT4P50991 539 aaKnown RBP7.5□□□□□ -1.21
RN7SKP288-201ENST00000516227 SLC39A6Q13433 755 aa7.5□□□□□ -1.21
RN7SKP288-201ENST00000516227 BTAF1O14981 1849 aa7.5□□□□□ -1.21
RN7SKP288-201ENST00000516227 MYH14Q7Z406 1995 aaKnown RBP7.5□□□□□ -1.21
RN7SKP288-201ENST00000516227 TJP1Q07157 1748 aa7.49□□□□□ -1.21
RN7SKP288-201ENST00000516227 PDE4AP27815 886 aa7.49□□□□□ -1.21
RN7SKP288-201ENST00000516227 HDAC1Q13547 482 aaPredicted RBP7.49□□□□□ -1.21
RN7SKP288-201ENST00000516227 PHAXQ9H814 394 aaKnown RBP7.49□□□□□ -1.21
RN7SKP288-201ENST00000516227 CHPF2Q9P2E5 772 aa7.49□□□□□ -1.21
RN7SKP288-201ENST00000516227 ZBTB47Q9UFB7 747 aaPredicted RBP7.49□□□□□ -1.21
RN7SKP288-201ENST00000516227 GIGYF1O75420 1035 aaPredicted RBP7.48□□□□□ -1.21
RN7SKP288-201ENST00000516227 ANXA1P04083 346 aa7.48□□□□□ -1.21
RN7SKP288-201ENST00000516227 GLI3P10071 1580 aa7.48□□□□□ -1.21
RN7SKP288-201ENST00000516227 ZNF790Q6PG37 636 aa7.48□□□□□ -1.21
RN7SKP288-201ENST00000516227 BCL11AQ9H165 835 aa7.48□□□□□ -1.21
RN7SKP288-201ENST00000516227 DBF4Q9UBU7 674 aaPredicted RBP7.48□□□□□ -1.21
RN7SKP288-201ENST00000516227 CCDC9Q9Y3X0 531 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms