RNA–Protein interactions for RNA: ENST00000515859.5

TUSC3-213, Transcript of tumor suppressor candidate 3, human

TSL 5

Gene TUSC3, Length 1,627 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-213	ENST00000515859	NFATC2IP	Q8NCF5	419 aa		32.1	■■■□□ 2.73
TUSC3-213	ENST00000515859		A0A0G2JS52	829 aa		32.09	■■■□□ 2.73
TUSC3-213	ENST00000515859	MYT1	Q01538	1121 aa		32.09	■■■□□ 2.73
TUSC3-213	ENST00000515859	ZNF428	Q96B54	188 aa		32.09	■■■□□ 2.73
TUSC3-213	ENST00000515859	SUPT16H	Q9Y5B9	1047 aa	Known RBP	32.08	■■■□□ 2.73
TUSC3-213	ENST00000515859	THSD7A	Q9UPZ6	1657 aa		32.08	■■■□□ 2.73
TUSC3-213	ENST00000515859	SIPA1L3	O60292	1781 aa	Predicted RBP	32.06	■■■□□ 2.72
TUSC3-213	ENST00000515859	MARCH10	Q8NA82	808 aa	Predicted RBP	32.06	■■■□□ 2.72
TUSC3-213	ENST00000515859	TWISTNB	Q3B726	338 aa	Predicted RBP	32.05	■■■□□ 2.72
TUSC3-213	ENST00000515859	C8orf58	Q8NAV2	365 aa		32.05	■■■□□ 2.72
TUSC3-213	ENST00000515859	SOS1	Q07889	1333 aa	Predicted RBP	32.04	■■■□□ 2.72
TUSC3-213	ENST00000515859	VAMP4	O75379	141 aa		32.03	■■■□□ 2.72
TUSC3-213	ENST00000515859	RBM6	P78332	1123 aa	Known RBP	32.03	■■■□□ 2.72
TUSC3-213	ENST00000515859	TSPYL6	Q8N831	410 aa		32.03	■■■□□ 2.72
TUSC3-213	ENST00000515859	RARS	P54136	660 aa	Known RBP	32.02	■■■□□ 2.72
TUSC3-213	ENST00000515859	EIF4A1	P60842	406 aa	Known RBP	32.01	■■■□□ 2.72
TUSC3-213	ENST00000515859	ZNF790	Q6PG37	636 aa		32.01	■■■□□ 2.72
TUSC3-213	ENST00000515859	KDM3B	Q7LBC6	1761 aa		32.01	■■■□□ 2.72
TUSC3-213	ENST00000515859	TMOD3	Q9NYL9	352 aa		32.01	■■■□□ 2.72
TUSC3-213	ENST00000515859	RNF123	Q5XPI4	1314 aa		32	■■■□□ 2.71
TUSC3-213	ENST00000515859	SEPT12	Q8IYM1	358 aa		32	■■■□□ 2.71
TUSC3-213	ENST00000515859	ELL2	O00472	640 aa	Predicted RBP	32	■■■□□ 2.71
TUSC3-213	ENST00000515859	ALDH1L2	Q3SY69	923 aa		31.99	■■■□□ 2.71
TUSC3-213	ENST00000515859	KRT24	Q2M2I5	525 aa		31.98	■■■□□ 2.71
TUSC3-213	ENST00000515859	KCNQ3	O43525	872 aa		31.97	■■■□□ 2.71
TUSC3-213	ENST00000515859	TTC5	Q8N0Z6	440 aa		31.97	■■■□□ 2.71
TUSC3-213	ENST00000515859	TOGARAM1	Q9Y4F4	1720 aa		31.97	■■■□□ 2.71
TUSC3-213	ENST00000515859	HOXB7	P09629	217 aa		31.97	■■■□□ 2.71
TUSC3-213	ENST00000515859	CHMP4A	Q9BY43	222 aa		31.96	■■■□□ 2.71
TUSC3-213	ENST00000515859	SLC39A6	Q13433	755 aa		31.95	■■■□□ 2.71
TUSC3-213	ENST00000515859	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	31.94	■■■□□ 2.7
TUSC3-213	ENST00000515859	BCAR3	O75815	825 aa		31.93	■■■□□ 2.7
TUSC3-213	ENST00000515859	RRP1	P56182	461 aa	Known RBP	31.93	■■■□□ 2.7
TUSC3-213	ENST00000515859	PIGB	Q92521	554 aa		31.93	■■■□□ 2.7
TUSC3-213	ENST00000515859	HEG1	Q9ULI3	1381 aa		31.93	■■■□□ 2.7
TUSC3-213	ENST00000515859	BCL9	O00512	1426 aa		31.93	■■■□□ 2.7
TUSC3-213	ENST00000515859	PRIM1	P49642	420 aa	Known RBP	31.93	■■■□□ 2.7
TUSC3-213	ENST00000515859	RXRB	P28702	533 aa		31.92	■■■□□ 2.7
TUSC3-213	ENST00000515859	SSH1	Q8WYL5	1049 aa		31.92	■■■□□ 2.7
TUSC3-213	ENST00000515859	SMC4	Q9NTJ3	1288 aa		31.92	■■■□□ 2.7
TUSC3-213	ENST00000515859	SYTL4	Q96C24	671 aa	Predicted RBP	31.91	■■■□□ 2.7
TUSC3-213	ENST00000515859	FMNL2	Q96PY5	1086 aa		31.91	■■■□□ 2.7
TUSC3-213	ENST00000515859	RGS17	Q9UGC6	210 aa	Predicted RBP	31.91	■■■□□ 2.7
TUSC3-213	ENST00000515859	BRPF1	P55201	1214 aa	Predicted RBP	31.9	■■■□□ 2.7
TUSC3-213	ENST00000515859	GIGYF1	O75420	1035 aa	Predicted RBP	31.89	■■■□□ 2.7
TUSC3-213	ENST00000515859	NEFL	P07196	543 aa		31.89	■■■□□ 2.7
TUSC3-213	ENST00000515859	ITGB4	P16144	1822 aa		31.89	■■■□□ 2.69
TUSC3-213	ENST00000515859	DOT1L	Q8TEK3	1739 aa		31.88	■■■□□ 2.69
TUSC3-213	ENST00000515859	ZNF496	Q96IT1	587 aa	Predicted RBP	31.88	■■■□□ 2.69
TUSC3-213	ENST00000515859	CCDC30	Q5VVM6	783 aa		31.87	■■■□□ 2.69
TUSC3-213	ENST00000515859	BCL2L13	Q9BXK5	485 aa		31.87	■■■□□ 2.69
TUSC3-213	ENST00000515859	ACSBG1	Q96GR2	724 aa		31.86	■■■□□ 2.69
TUSC3-213	ENST00000515859	PAPPA	Q13219	1627 aa		31.85	■■■□□ 2.69
TUSC3-213	ENST00000515859	SNRPA1	P09661	255 aa	Known RBP	31.85	■■■□□ 2.69
TUSC3-213	ENST00000515859	KRT27	Q7Z3Y8	459 aa		31.85	■■■□□ 2.69
TUSC3-213	ENST00000515859	ATG3	Q9NT62	314 aa		31.85	■■■□□ 2.69
TUSC3-213	ENST00000515859	ILDR1	Q86SU0	546 aa	Predicted RBP	31.84	■■■□□ 2.69
TUSC3-213	ENST00000515859	ASAP1	Q9ULH1	1129 aa		31.84	■■■□□ 2.69
TUSC3-213	ENST00000515859	KAT6B	Q8WYB5	2073 aa		31.84	■■■□□ 2.69
TUSC3-213	ENST00000515859	KIF16B	Q96L93	1317 aa		31.84	■■■□□ 2.69
TUSC3-213	ENST00000515859	HDGFL1	Q5TGJ6	251 aa		31.83	■■■□□ 2.69
TUSC3-213	ENST00000515859	MRPL50	Q8N5N7	158 aa	Known RBP	31.83	■■■□□ 2.69
TUSC3-213	ENST00000515859	STK31	Q9BXU1	1019 aa		31.82	■■■□□ 2.69
TUSC3-213	ENST00000515859	POTEA	Q6S8J7	498 aa		31.82	■■■□□ 2.68
TUSC3-213	ENST00000515859	PLIN1	O60240	522 aa		31.81	■■■□□ 2.68
TUSC3-213	ENST00000515859	CANX	P27824	592 aa	Known RBP	31.81	■■■□□ 2.68
TUSC3-213	ENST00000515859	UBR2	Q8IWV8	1755 aa		31.8	■■■□□ 2.68
TUSC3-213	ENST00000515859	IPO8	O15397	1037 aa	Known RBP	31.8	■■■□□ 2.68
TUSC3-213	ENST00000515859	FRAT1	Q92837	279 aa	Predicted RBP	31.8	■■■□□ 2.68
TUSC3-213	ENST00000515859	KCP	Q6ZWJ8	1503 aa		31.8	■■■□□ 2.68
TUSC3-213	ENST00000515859	VSIG10	Q8N0Z9	540 aa		31.79	■■■□□ 2.68
TUSC3-213	ENST00000515859	KCNQ2	O43526	872 aa		31.78	■■■□□ 2.68
TUSC3-213	ENST00000515859	PTCD1	O75127	700 aa	Known RBP	31.78	■■■□□ 2.68
TUSC3-213	ENST00000515859	EIF2S2	P20042	333 aa	Known RBP	31.78	■■■□□ 2.68
TUSC3-213	ENST00000515859	FAM196A	Q6ZSG2	479 aa		31.78	■■■□□ 2.68
TUSC3-213	ENST00000515859	TCERG1	O14776	1098 aa	Known RBP	31.78	■■■□□ 2.68
TUSC3-213	ENST00000515859	SLC4A2	P04920	1241 aa		31.78	■■■□□ 2.68
TUSC3-213	ENST00000515859	FAM182B	Q5T319	152 aa		31.78	■■■□□ 2.68
TUSC3-213	ENST00000515859	ZKSCAN2	Q63HK3	967 aa		31.78	■■■□□ 2.68
TUSC3-213	ENST00000515859	ARHGAP45	Q92619	1136 aa		31.77	■■■□□ 2.68
TUSC3-213	ENST00000515859	SMARCC1	Q92922	1105 aa	Predicted RBP	31.77	■■■□□ 2.68
TUSC3-213	ENST00000515859	NOB1	Q9ULX3	412 aa	Known RBP	31.77	■■■□□ 2.68
TUSC3-213	ENST00000515859	PRAMEF22	A3QJZ6	481 aa		31.75	■■■□□ 2.67
TUSC3-213	ENST00000515859	MS4A1	P11836	297 aa		31.75	■■■□□ 2.67
TUSC3-213	ENST00000515859	PDE3A	Q14432	1141 aa		31.75	■■■□□ 2.67
TUSC3-213	ENST00000515859	TEX13A	Q9BXU3	409 aa	Predicted RBP	31.75	■■■□□ 2.67
TUSC3-213	ENST00000515859	NECTIN2	Q92692	538 aa		31.75	■■■□□ 2.67
TUSC3-213	ENST00000515859	DBF4	Q9UBU7	674 aa	Predicted RBP	31.75	■■■□□ 2.67
TUSC3-213	ENST00000515859	BRWD3	Q6RI45	1802 aa		31.74	■■■□□ 2.67
TUSC3-213	ENST00000515859	ATF7IP	Q6VMQ6	1270 aa		31.73	■■■□□ 2.67
TUSC3-213	ENST00000515859	FKBP8	Q14318	412 aa		31.72	■■■□□ 2.67
TUSC3-213	ENST00000515859	RBM42	Q9BTD8	480 aa	Known RBP	31.72	■■■□□ 2.67
TUSC3-213	ENST00000515859	GTF3C3	Q9Y5Q9	886 aa		31.72	■■■□□ 2.67
TUSC3-213	ENST00000515859	NHS	Q6T4R5	1651 aa		31.72	■■■□□ 2.67
TUSC3-213	ENST00000515859	RGS12	O14924	1447 aa		31.72	■■■□□ 2.67
TUSC3-213	ENST00000515859	USP16	Q9Y5T5	823 aa		31.71	■■■□□ 2.67
TUSC3-213	ENST00000515859	PTPRC	P08575	1304 aa		31.71	■■■□□ 2.67
TUSC3-213	ENST00000515859	CACNA1F	O60840	1977 aa		31.7	■■■□□ 2.67
TUSC3-213	ENST00000515859	IRX6	P78412	446 aa	Predicted RBP	31.7	■■■□□ 2.66
TUSC3-213	ENST00000515859	BCL11B	Q9C0K0	894 aa	Predicted RBP	31.7	■■■□□ 2.66

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