RNA–Protein interactions for RNA: ENST00000515675.1

AFP-207, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 317 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-207ENST00000515675 ERBB4Q15303 1308 aa7.64□□□□□ -1.19
AFP-207ENST00000515675 H3BM21 787 aa7.64□□□□□ -1.19
AFP-207ENST00000515675 WASLO00401 505 aaPredicted RBP7.64□□□□□ -1.19
AFP-207ENST00000515675 NBPF10Q6P3W6 841 aaKnown RBP7.64□□□□□ -1.19
AFP-207ENST00000515675 NPAS3Q8IXF0 933 aa7.64□□□□□ -1.19
AFP-207ENST00000515675 NBPF15Q8N660 670 aa7.64□□□□□ -1.19
AFP-207ENST00000515675 SLC4A9Q96Q91 983 aa7.64□□□□□ -1.19
AFP-207ENST00000515675 SPATA31C2B4DYI2 1134 aa7.63□□□□□ -1.19
AFP-207ENST00000515675 DKK1O94907 266 aa7.63□□□□□ -1.19
AFP-207ENST00000515675 RFX1P22670 979 aa7.63□□□□□ -1.19
AFP-207ENST00000515675 PHKA2P46019 1235 aa7.63□□□□□ -1.19
AFP-207ENST00000515675 SMTNP53814 917 aa7.63□□□□□ -1.19
AFP-207ENST00000515675 PSME1Q06323 249 aa7.63□□□□□ -1.19
AFP-207ENST00000515675 TLR1Q15399 786 aa7.63□□□□□ -1.19
AFP-207ENST00000515675 CCDC102BQ68D86 513 aa7.63□□□□□ -1.19
AFP-207ENST00000515675 TRIM50Q86XT4 487 aa7.63□□□□□ -1.19
AFP-207ENST00000515675 DNAAF2Q9NVR5 837 aaKnown RBP7.63□□□□□ -1.19
AFP-207ENST00000515675 ZNF358Q9NW07 568 aa7.63□□□□□ -1.19
AFP-207ENST00000515675 RASA1P20936 1047 aa7.62□□□□□ -1.19
AFP-207ENST00000515675 CDCA8Q53HL2 280 aa7.62□□□□□ -1.19
AFP-207ENST00000515675 PPARGC1BQ86YN6 1023 aaKnown RBP7.62□□□□□ -1.19
AFP-207ENST00000515675 TPCN2Q8NHX9 752 aa7.62□□□□□ -1.19
AFP-207ENST00000515675 SLC16A10Q8TF71 515 aa7.62□□□□□ -1.19
AFP-207ENST00000515675 ZNF594Q96JF6 807 aaPredicted RBP7.62□□□□□ -1.19
AFP-207ENST00000515675 C1orf115Q9H7X2 142 aa7.62□□□□□ -1.19
AFP-207ENST00000515675 CUEDC1Q9NWM3 386 aaPredicted RBP7.62□□□□□ -1.19
AFP-207ENST00000515675 USP3Q9Y6I4 520 aa7.62□□□□□ -1.19
AFP-207ENST00000515675 ATP1A2P50993 1020 aa7.61□□□□□ -1.19
AFP-207ENST00000515675 MTFR1Q15390 333 aa7.61□□□□□ -1.19
AFP-207ENST00000515675 CRTC2Q53ET0 693 aaPredicted RBP7.61□□□□□ -1.19
AFP-207ENST00000515675 C4orf17Q53FE4 359 aa7.61□□□□□ -1.19
AFP-207ENST00000515675 TMEM214Q6NUQ4 689 aaKnown RBP7.61□□□□□ -1.19
AFP-207ENST00000515675 TAS1R3Q7RTX0 852 aa7.61□□□□□ -1.19
AFP-207ENST00000515675 LARGE2Q8N3Y3 721 aa7.61□□□□□ -1.19
AFP-207ENST00000515675 VRTNQ9H8Y1 702 aa7.61□□□□□ -1.19
AFP-207ENST00000515675 A6NJY4 79 aa7.6□□□□□ -1.19
AFP-207ENST00000515675 SFI1A8K8P3 1242 aa7.6□□□□□ -1.19
AFP-207ENST00000515675 ITGA6P23229 1130 aa7.6□□□□□ -1.19
AFP-207ENST00000515675 TNS4Q8IZW8 715 aa7.6□□□□□ -1.19
AFP-207ENST00000515675 GPR161Q8N6U8 529 aaKnown RBP7.6□□□□□ -1.19
AFP-207ENST00000515675 TIMELESSQ9UNS1 1208 aa7.6□□□□□ -1.19
AFP-207ENST00000515675 IQSEC3Q9UPP2 1182 aaPredicted RBP7.6□□□□□ -1.19
AFP-207ENST00000515675 EPHA4P54764 986 aa7.59□□□□□ -1.19
AFP-207ENST00000515675 PTK7Q13308 1070 aa7.59□□□□□ -1.19
AFP-207ENST00000515675 WDR44Q5JSH3 913 aa7.59□□□□□ -1.19
AFP-207ENST00000515675 ZNF295-AS1Q8N0V1 137 aa7.59□□□□□ -1.19
AFP-207ENST00000515675 SIX5Q8N196 739 aa7.59□□□□□ -1.19
AFP-207ENST00000515675 VWA5B2Q8N398 1253 aa7.59□□□□□ -1.19
AFP-207ENST00000515675 RHBDD1Q8TEB9 315 aa7.59□□□□□ -1.19
AFP-207ENST00000515675 GAS2L1Q99501 681 aaPredicted RBP7.59□□□□□ -1.19
AFP-207ENST00000515675 TIMMDC1Q9NPL8 285 aa7.59□□□□□ -1.19
AFP-207ENST00000515675 DYRK1BQ9Y463 629 aa7.59□□□□□ -1.19
AFP-207ENST00000515675 CDK2AP1O14519 115 aa7.58□□□□□ -1.2
AFP-207ENST00000515675 BACH1O14867 736 aa7.58□□□□□ -1.2
AFP-207ENST00000515675 GMPRP36959 345 aa7.58□□□□□ -1.2
AFP-207ENST00000515675 SRPK2P78362 688 aaKnown RBP7.58□□□□□ -1.2
AFP-207ENST00000515675 GNASQ5JWF2 1037 aa7.58□□□□□ -1.2
AFP-207ENST00000515675 TBCELQ5QJ74 424 aa7.58□□□□□ -1.2
AFP-207ENST00000515675 IRF7Q92985 503 aa7.58□□□□□ -1.2
AFP-207ENST00000515675 VSIG8P0DPA2 414 aa7.57□□□□□ -1.2
AFP-207ENST00000515675 GTF2E1P29083 439 aaPredicted RBP7.57□□□□□ -1.2
AFP-207ENST00000515675 DBN1Q16643 649 aa7.57□□□□□ -1.2
AFP-207ENST00000515675 LARP1Q6PKG0 1096 aaKnown RBP7.57□□□□□ -1.2
AFP-207ENST00000515675 TSEN2Q8NCE0 465 aaKnown RBP7.57□□□□□ -1.2
AFP-207ENST00000515675 NANOS1Q8WY41 292 aaKnown RBP7.57□□□□□ -1.2
AFP-207ENST00000515675 SCHIP1Q9P0W5 487 aaPredicted RBP7.57□□□□□ -1.2
AFP-207ENST00000515675 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.56□□□□□ -1.2
AFP-207ENST00000515675 CDC14CA4D256 554 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 USP17L15C9J2P7 530 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 USP17L10C9JJH3 530 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 USP17L13C9JLJ4 530 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 USP17L12C9JPN9 530 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 USP17L11C9JVI0 530 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 USP17L21D6R901 530 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 USP17L18D6R9N7 530 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 USP17L22D6RA61 530 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 USP17L17D6RBQ6 530 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 USP17L19D6RCP7 530 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 USP17L20D6RJB6 530 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 LGR5O75473 907 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 FOXK2Q01167 660 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 USP17L24Q0WX57 530 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 DPYDQ12882 1025 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 RIPOR1Q6ZS17 1223 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 PARP3Q9Y6F1 533 aa7.56□□□□□ -1.2
AFP-207ENST00000515675 FAM196BA6NMK8 535 aa7.55□□□□□ -1.2
AFP-207ENST00000515675 F11P03951 625 aa7.55□□□□□ -1.2
AFP-207ENST00000515675 THBS1P07996 1170 aa7.55□□□□□ -1.2
AFP-207ENST00000515675 PLA2G4AP47712 749 aa7.55□□□□□ -1.2
AFP-207ENST00000515675 ANKMY2Q8IV38 441 aa7.55□□□□□ -1.2
AFP-207ENST00000515675 CCDC82Q8N4S0 544 aa7.55□□□□□ -1.2
AFP-207ENST00000515675 ZDHHC1Q8WTX9 485 aa7.55□□□□□ -1.2
AFP-207ENST00000515675 CCDC97Q96F63 343 aaPredicted RBP7.55□□□□□ -1.2
AFP-207ENST00000515675 ARXQ96QS3 562 aa7.55□□□□□ -1.2
AFP-207ENST00000515675 NIFKQ9BYG3 293 aaKnown RBP7.55□□□□□ -1.2
AFP-207ENST00000515675 GPAMQ9HCL2 828 aa7.55□□□□□ -1.2
AFP-207ENST00000515675 SERPINA10Q9UK55 444 aa7.55□□□□□ -1.2
AFP-207ENST00000515675 M0R2N6 131 aa7.54□□□□□ -1.2
AFP-207ENST00000515675 MSX1P28360 303 aa7.54□□□□□ -1.2
AFP-207ENST00000515675 SEC13P55735 322 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms