RNA–Protein interactions for RNA: ENST00000515663.5

CAST-244, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-244ENST00000515663 CRBNQ96SW2 442 aa11.35□□□□□ -0.59
CAST-244ENST00000515663 STRN4Q9NRL3 753 aa11.35□□□□□ -0.59
CAST-244ENST00000515663 SMC4Q9NTJ3 1288 aa11.35□□□□□ -0.59
CAST-244ENST00000515663 MIS18AQ9NYP9 233 aa11.35□□□□□ -0.59
CAST-244ENST00000515663 PARP4Q9UKK3 1724 aaKnown RBP11.35□□□□□ -0.59
CAST-244ENST00000515663 MS4A1P11836 297 aa11.34□□□□□ -0.59
CAST-244ENST00000515663 ZKSCAN2Q63HK3 967 aa11.34□□□□□ -0.59
CAST-244ENST00000515663 PCDH11XQ9BZA7 1347 aa11.34□□□□□ -0.59
CAST-244ENST00000515663 PCDH11YQ9BZA8 1340 aa11.34□□□□□ -0.59
CAST-244ENST00000515663 NRAPQ86VF7 1730 aa11.33□□□□□ -0.6
CAST-244ENST00000515663 ELL2O00472 640 aaPredicted RBP11.33□□□□□ -0.6
CAST-244ENST00000515663 IPO8O15397 1037 aaKnown RBP11.33□□□□□ -0.6
CAST-244ENST00000515663 HOXB7P09629 217 aa11.33□□□□□ -0.6
CAST-244ENST00000515663 EIF4A1P60842 406 aaKnown RBP11.33□□□□□ -0.6
CAST-244ENST00000515663 TEFQ10587 303 aa11.33□□□□□ -0.6
CAST-244ENST00000515663 AAMPQ13685 434 aa11.33□□□□□ -0.6
CAST-244ENST00000515663 KRT24Q2M2I5 525 aa11.33□□□□□ -0.6
CAST-244ENST00000515663 ATF7IPQ6VMQ6 1270 aa11.33□□□□□ -0.6
CAST-244ENST00000515663 BCL2L13Q9BXK5 485 aa11.33□□□□□ -0.6
CAST-244ENST00000515663 SLC52A2Q9HAB3 445 aa11.33□□□□□ -0.6
CAST-244ENST00000515663 THRAP3Q9Y2W1 955 aaKnown RBP11.33□□□□□ -0.6
CAST-244ENST00000515663 TRIM27P14373 513 aa11.32□□□□□ -0.6
CAST-244ENST00000515663 FNBP4Q8N3X1 1017 aaPredicted RBP11.32□□□□□ -0.6
CAST-244ENST00000515663 CDCA7Q9BWT1 371 aaPredicted RBP11.32□□□□□ -0.6
CAST-244ENST00000515663 NOB1Q9ULX3 412 aaKnown RBP11.32□□□□□ -0.6
CAST-244ENST00000515663 NWD2Q9ULI1 1742 aa11.32□□□□□ -0.6
CAST-244ENST00000515663 SIPA1L3O60292 1781 aaPredicted RBP11.32□□□□□ -0.6
CAST-244ENST00000515663 KDM3BQ7LBC6 1761 aa11.32□□□□□ -0.6
CAST-244ENST00000515663 PLCH1Q4KWH8 1693 aa11.32□□□□□ -0.6
CAST-244ENST00000515663 BTBD11A6QL63 1104 aa11.32□□□□□ -0.6
CAST-244ENST00000515663 ADAMTS2O95450 1211 aa11.32□□□□□ -0.6
CAST-244ENST00000515663 RLBP1P12271 317 aa11.32□□□□□ -0.6
CAST-244ENST00000515663 FRAT1Q92837 279 aaPredicted RBP11.32□□□□□ -0.6
CAST-244ENST00000515663 SCN11AQ9UI33 1791 aa11.31□□□□□ -0.6
CAST-244ENST00000515663 SPATA31A1Q5TZJ5 1347 aa11.31□□□□□ -0.6
CAST-244ENST00000515663 ERVV-2B6SEH9 535 aa11.31□□□□□ -0.6
CAST-244ENST00000515663 DZIP1LQ8IYY4 767 aaKnown RBP11.31□□□□□ -0.6
CAST-244ENST00000515663 PANK1Q8TE04 598 aa11.31□□□□□ -0.6
CAST-244ENST00000515663 CHMP4AQ9BY43 222 aa11.31□□□□□ -0.6
CAST-244ENST00000515663 SPATA31A5Q5VU36 1347 aa11.3□□□□□ -0.6
CAST-244ENST00000515663 SPATA31A7Q8IWB4 1347 aa11.3□□□□□ -0.6
CAST-244ENST00000515663 NUTM2BA6NNL0 878 aaPredicted RBP11.3□□□□□ -0.6
CAST-244ENST00000515663 NUTM2EB1AL46 878 aaPredicted RBP11.3□□□□□ -0.6
CAST-244ENST00000515663 BARGINQ6ZT62 677 aa11.3□□□□□ -0.6
CAST-244ENST00000515663 NUTM2AQ8IVF1 878 aaPredicted RBP11.3□□□□□ -0.6
CAST-244ENST00000515663 TNNQ9UQP3 1299 aa11.3□□□□□ -0.6
CAST-244ENST00000515663 BCL9LQ86UU0 1499 aa11.3□□□□□ -0.6
CAST-244ENST00000515663 SHANK3Q9BYB0 1731 aa11.3□□□□□ -0.6
CAST-244ENST00000515663 KCNQ3O43525 872 aa11.29□□□□□ -0.6
CAST-244ENST00000515663 CANXP27824 592 aaKnown RBP11.29□□□□□ -0.6
CAST-244ENST00000515663 HSPA1LP34931 641 aa11.29□□□□□ -0.6
CAST-244ENST00000515663 MVPQ14764 893 aaKnown RBP11.29□□□□□ -0.6
CAST-244ENST00000515663 CCDC30Q5VVM6 783 aa11.29□□□□□ -0.6
CAST-244ENST00000515663 UNC5CLQ8IV45 518 aa11.29□□□□□ -0.6
CAST-244ENST00000515663 NFATC2IPQ8NCF5 419 aa11.29□□□□□ -0.6
CAST-244ENST00000515663 PTPRCP08575 1304 aa11.29□□□□□ -0.6
CAST-244ENST00000515663 GIGYF1O75420 1035 aaPredicted RBP11.28□□□□□ -0.6
CAST-244ENST00000515663 VPS72Q15906 364 aa11.28□□□□□ -0.6
CAST-244ENST00000515663 B4GALNT3Q6L9W6 998 aa11.28□□□□□ -0.6
CAST-244ENST00000515663 ZNF790Q6PG37 636 aa11.28□□□□□ -0.6
CAST-244ENST00000515663 API5Q9BZZ5 524 aaKnown RBP11.28□□□□□ -0.6
CAST-244ENST00000515663 COG6Q9Y2V7 657 aa11.28□□□□□ -0.6
CAST-244ENST00000515663 ABCC4O15439 1325 aa11.28□□□□□ -0.6
CAST-244ENST00000515663 LRP6O75581 1613 aa11.28□□□□□ -0.6
CAST-244ENST00000515663 CABP4P57796 275 aa11.27□□□□□ -0.6
CAST-244ENST00000515663 SAMD1Q6SPF0 538 aaPredicted RBP11.27□□□□□ -0.6
CAST-244ENST00000515663 CCDC136Q96JN2 1154 aa11.27□□□□□ -0.6
CAST-244ENST00000515663 RGS12O14924 1447 aa11.27□□□□□ -0.61
CAST-244ENST00000515663 EXOC5O00471 708 aa11.26□□□□□ -0.61
CAST-244ENST00000515663 SOCS7O14512 581 aa11.26□□□□□ -0.61
CAST-244ENST00000515663 CLUAP1Q96AJ1 413 aa11.26□□□□□ -0.61
CAST-244ENST00000515663 USP35Q9P2H5 1018 aa11.26□□□□□ -0.61
CAST-244ENST00000515663 DDX19BQ9UMR2 479 aa11.26□□□□□ -0.61
CAST-244ENST00000515663 VIRMAQ69YN4 1812 aaKnown RBP11.26□□□□□ -0.61
CAST-244ENST00000515663 TNS2Q63HR2 1409 aa11.26□□□□□ -0.61
CAST-244ENST00000515663 TCERG1O14776 1098 aaKnown RBP11.25□□□□□ -0.61
CAST-244ENST00000515663 INTS3Q68E01 1043 aaKnown RBP11.25□□□□□ -0.61
CAST-244ENST00000515663 FTSJ3Q8IY81 847 aaKnown RBP11.25□□□□□ -0.61
CAST-244ENST00000515663 TMEM57Q8N5G2 664 aa11.25□□□□□ -0.61
CAST-244ENST00000515663 DDX54Q8TDD1 881 aaKnown RBP11.25□□□□□ -0.61
CAST-244ENST00000515663 NGLY1Q96IV0 654 aa11.25□□□□□ -0.61
CAST-244ENST00000515663 WNK3Q9BYP7 1800 aa11.25□□□□□ -0.61
CAST-244ENST00000515663 ABCB7O75027 752 aa11.25□□□□□ -0.61
CAST-244ENST00000515663 HDGFL1Q5TGJ6 251 aa11.25□□□□□ -0.61
CAST-244ENST00000515663 STK31Q9BXU1 1019 aa11.25□□□□□ -0.61
CAST-244ENST00000515663 KDM2BQ8NHM5 1336 aa11.25□□□□□ -0.61
CAST-244ENST00000515663 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.24□□□□□ -0.61
CAST-244ENST00000515663 ZBTB7BO15156 539 aaPredicted RBP11.24□□□□□ -0.61
CAST-244ENST00000515663 ILDR2Q71H61 639 aa11.24□□□□□ -0.61
CAST-244ENST00000515663 G2E3Q7L622 706 aa11.24□□□□□ -0.61
CAST-244ENST00000515663 ZNF496Q96IT1 587 aaPredicted RBP11.24□□□□□ -0.61
CAST-244ENST00000515663 ZBTB40Q9NUA8 1239 aa11.24□□□□□ -0.61
CAST-244ENST00000515663 SLC39A6Q13433 755 aa11.23□□□□□ -0.61
CAST-244ENST00000515663 C8orf37Q96NL8 207 aa11.23□□□□□ -0.61
CAST-244ENST00000515663 CHMP4BQ9H444 224 aaKnown RBP11.23□□□□□ -0.61
CAST-244ENST00000515663 DBF4Q9UBU7 674 aaPredicted RBP11.23□□□□□ -0.61
CAST-244ENST00000515663 PAPPAQ13219 1627 aa11.22□□□□□ -0.61
CAST-244ENST00000515663 GLI3P10071 1580 aa11.22□□□□□ -0.61
CAST-244ENST00000515663 SNRPA1P09661 255 aaKnown RBP11.22□□□□□ -0.61
CAST-244ENST00000515663 FLIIQ13045 1269 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms