RNA–Protein interactions for RNA: ENST00000515658.1

COL4A5-210, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-210ENST00000515658 CD44P16070 742 aaKnown RBP13.55□□□□□ -0.24
COL4A5-210ENST00000515658 KNSTRNQ9Y448 316 aa13.55□□□□□ -0.24
COL4A5-210ENST00000515658 KAT6BQ8WYB5 2073 aa13.55□□□□□ -0.24
COL4A5-210ENST00000515658 NBPF14Q5TI25 921 aa13.54□□□□□ -0.24
COL4A5-210ENST00000515658 RASEFQ8IZ41 740 aa13.54□□□□□ -0.24
COL4A5-210ENST00000515658 FAM212AQ96EL1 285 aa13.54□□□□□ -0.24
COL4A5-210ENST00000515658 IGSF1Q8N6C5 1336 aa13.54□□□□□ -0.24
COL4A5-210ENST00000515658 TUBGCP6Q96RT7 1819 aa13.53□□□□□ -0.24
COL4A5-210ENST00000515658 GABBR2O75899 941 aa13.53□□□□□ -0.24
COL4A5-210ENST00000515658 ZBTB7AO95365 584 aa13.53□□□□□ -0.24
COL4A5-210ENST00000515658 LY75O60449 1722 aa13.53□□□□□ -0.24
COL4A5-210ENST00000515658 SLC15A2Q16348 729 aa13.52□□□□□ -0.25
COL4A5-210ENST00000515658 SMIM5Q71RC9 77 aa13.52□□□□□ -0.25
COL4A5-210ENST00000515658 PCDH11XQ9BZA7 1347 aa13.52□□□□□ -0.25
COL4A5-210ENST00000515658 PCDH11YQ9BZA8 1340 aa13.52□□□□□ -0.25
COL4A5-210ENST00000515658 ITGB4P16144 1822 aa13.52□□□□□ -0.25
COL4A5-210ENST00000515658 IL13P35225 146 aa13.51□□□□□ -0.25
COL4A5-210ENST00000515658 GSE1Q14687 1217 aa13.51□□□□□ -0.25
COL4A5-210ENST00000515658 MTHFSP49914 203 aa13.5□□□□□ -0.25
COL4A5-210ENST00000515658 MPRIPQ6WCQ1 1025 aa13.5□□□□□ -0.25
COL4A5-210ENST00000515658 AMIGO3Q86WK7 504 aa13.5□□□□□ -0.25
COL4A5-210ENST00000515658 PIGBQ92521 554 aa13.5□□□□□ -0.25
COL4A5-210ENST00000515658 STK32BQ9NY57 414 aa13.5□□□□□ -0.25
COL4A5-210ENST00000515658 COL3A1P02461 1466 aaPredicted RBP13.49□□□□□ -0.25
COL4A5-210ENST00000515658 PHKG2P15735 406 aa13.49□□□□□ -0.25
COL4A5-210ENST00000515658 PTGER2P43116 358 aa13.49□□□□□ -0.25
COL4A5-210ENST00000515658 KDM6AO15550 1401 aaPredicted RBP13.48□□□□□ -0.25
COL4A5-210ENST00000515658 NKX1-1Q15270 411 aaPredicted RBP13.48□□□□□ -0.25
COL4A5-210ENST00000515658 SULT6B1Q6IMI4 303 aa13.48□□□□□ -0.25
COL4A5-210ENST00000515658 PNPLA7Q6ZV29 1317 aa13.47□□□□□ -0.25
COL4A5-210ENST00000515658 HMOX1P09601 288 aa13.47□□□□□ -0.25
COL4A5-210ENST00000515658 DCAF8Q5TAQ9 597 aa13.47□□□□□ -0.25
COL4A5-210ENST00000515658 TSPYL2Q9H2G4 693 aaPredicted RBP13.47□□□□□ -0.25
COL4A5-210ENST00000515658 PALLDQ8WX93 1383 aa13.46□□□□□ -0.25
COL4A5-210ENST00000515658 CCNL1Q9UK58 526 aaPredicted RBP13.46□□□□□ -0.25
COL4A5-210ENST00000515658 ASAP1Q9ULH1 1129 aa13.46□□□□□ -0.25
COL4A5-210ENST00000515658 SPG7Q9UQ90 795 aa13.46□□□□□ -0.25
COL4A5-210ENST00000515658 C5P01031 1676 aa13.45□□□□□ -0.26
COL4A5-210ENST00000515658 SGIP1Q9BQI5 828 aa13.45□□□□□ -0.26
COL4A5-210ENST00000515658 SPON1Q9HCB6 807 aa13.45□□□□□ -0.26
COL4A5-210ENST00000515658 KDRP35968 1356 aa13.45□□□□□ -0.26
COL4A5-210ENST00000515658 TAF1LQ8IZX4 1826 aa13.44□□□□□ -0.26
COL4A5-210ENST00000515658 ZNF530Q6P9A1 599 aaPredicted RBP13.44□□□□□ -0.26
COL4A5-210ENST00000515658 SLC4A9Q96Q91 983 aa13.44□□□□□ -0.26
COL4A5-210ENST00000515658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.44□□□□□ -0.263e-6■■■□□ 15.5
COL4A5-210ENST00000515658 ITPK1Q13572 414 aa13.43□□□□□ -0.26
COL4A5-210ENST00000515658 SLC27A3Q5K4L6 730 aa13.43□□□□□ -0.26
COL4A5-210ENST00000515658 IFNL2Q8IZJ0 200 aa13.43□□□□□ -0.26
COL4A5-210ENST00000515658 ATG3Q9NT62 314 aa13.43□□□□□ -0.26
COL4A5-210ENST00000515658 NPC1L1Q9UHC9 1359 aa13.43□□□□□ -0.26
COL4A5-210ENST00000515658 COL23A1Q86Y22 540 aaPredicted RBP13.42□□□□□ -0.26
COL4A5-210ENST00000515658 LINC00116Q8NCU8 138 aa13.42□□□□□ -0.26
COL4A5-210ENST00000515658 C4BP0C0L5 1744 aa13.42□□□□□ -0.26
COL4A5-210ENST00000515658 QSER1Q2KHR3 1735 aa13.42□□□□□ -0.26
COL4A5-210ENST00000515658 ZNF579Q8NAF0 562 aaKnown RBP13.41□□□□□ -0.26
COL4A5-210ENST00000515658 CIZ1Q9ULV3 898 aaPredicted RBP13.41□□□□□ -0.26
COL4A5-210ENST00000515658 CLCN6P51797 869 aa13.4□□□□□ -0.26
COL4A5-210ENST00000515658 PLEKHO1Q53GL0 409 aaPredicted RBP13.4□□□□□ -0.26
COL4A5-210ENST00000515658 MSL1Q68DK7 614 aa13.4□□□□□ -0.26
COL4A5-210ENST00000515658 LGR6Q9HBX8 967 aa13.4□□□□□ -0.26
COL4A5-210ENST00000515658 TMOD3Q9NYL9 352 aa13.4□□□□□ -0.26
COL4A5-210ENST00000515658 TFCP2L1Q9NZI6 479 aa13.4□□□□□ -0.26
COL4A5-210ENST00000515658 DIAPH1O60610 1272 aaKnown RBP13.39□□□□□ -0.27
COL4A5-210ENST00000515658 PPP2R1AP30153 589 aa13.39□□□□□ -0.27
COL4A5-210ENST00000515658 MTHFSDQ2M296 383 aaKnown RBP13.39□□□□□ -0.27
COL4A5-210ENST00000515658 MTFR1LQ9H019 292 aa13.39□□□□□ -0.27
COL4A5-210ENST00000515658 PPP1R1BQ9UD71 204 aaPredicted RBP13.39□□□□□ -0.27
COL4A5-210ENST00000515658 COL24A1Q17RW2 1714 aa13.39□□□□□ -0.27
COL4A5-210ENST00000515658 LOC102724428A0A0B4J2F2 783 aa13.38□□□□□ -0.27
COL4A5-210ENST00000515658 SIK1P57059 783 aa13.38□□□□□ -0.27
COL4A5-210ENST00000515658 FHDC1Q9C0D6 1143 aaPredicted RBP13.38□□□□□ -0.27
COL4A5-210ENST00000515658 UBR3Q6ZT12 1888 aa13.38□□□□□ -0.27
COL4A5-210ENST00000515658 SCN11AQ9UI33 1791 aa13.37□□□□□ -0.27
COL4A5-210ENST00000515658 U2SURPO15042 1029 aaKnown RBP13.37□□□□□ -0.27
COL4A5-210ENST00000515658 PHF14O94880 888 aa13.37□□□□□ -0.27
COL4A5-210ENST00000515658 DCAF5Q96JK2 942 aa13.37□□□□□ -0.27
COL4A5-210ENST00000515658 PHACTR3Q96KR7 559 aa13.37□□□□□ -0.27
COL4A5-210ENST00000515658 AMOTQ4VCS5 1084 aa13.36□□□□□ -0.27
COL4A5-210ENST00000515658 NFATC2IPQ8NCF5 419 aa13.36□□□□□ -0.27
COL4A5-210ENST00000515658 PLEKHG2Q9H7P9 1386 aa13.35□□□□□ -0.27
COL4A5-210ENST00000515658 ADAMTS7Q9UKP4 1686 aa13.35□□□□□ -0.27
COL4A5-210ENST00000515658 VIRMAQ69YN4 1812 aaKnown RBP13.35□□□□□ -0.27
COL4A5-210ENST00000515658 ERVV-2B6SEH9 535 aa13.35□□□□□ -0.27
COL4A5-210ENST00000515658 ATP6V1AP38606 617 aa13.35□□□□□ -0.27
COL4A5-210ENST00000515658 CABP4P57796 275 aa13.35□□□□□ -0.27
COL4A5-210ENST00000515658 SMARCC1Q92922 1105 aaPredicted RBP13.35□□□□□ -0.27
COL4A5-210ENST00000515658 TJP1Q07157 1748 aa13.35□□□□□ -0.27
COL4A5-210ENST00000515658 COL5A3P25940 1745 aaPredicted RBP13.34□□□□□ -0.27
COL4A5-210ENST00000515658 RNMTO43148 476 aaKnown RBP13.34□□□□□ -0.27
COL4A5-210ENST00000515658 PTCD1O75127 700 aaKnown RBP13.34□□□□□ -0.27
COL4A5-210ENST00000515658 CHRM1P11229 460 aaPredicted RBP13.34□□□□□ -0.27
COL4A5-210ENST00000515658 SLC39A6Q13433 755 aa13.34□□□□□ -0.27
COL4A5-210ENST00000515658 C1orf141Q5JVX7 400 aa13.34□□□□□ -0.27
COL4A5-210ENST00000515658 ARXQ96QS3 562 aa13.34□□□□□ -0.27
COL4A5-210ENST00000515658 SYT17Q9BSW7 474 aa13.34□□□□□ -0.27
COL4A5-210ENST00000515658 RTN4Q9NQC3 1192 aaKnown RBP13.34□□□□□ -0.27
COL4A5-210ENST00000515658 MRC1P22897 1456 aa13.34□□□□□ -0.27
COL4A5-210ENST00000515658 AKAP4Q5JQC9 854 aa13.33□□□□□ -0.28
COL4A5-210ENST00000515658 NLGN2Q8NFZ4 835 aa13.33□□□□□ -0.28
COL4A5-210ENST00000515658 RSPH6AQ9H0K4 717 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms