RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 TPCN2Q8NHX9 752 aa9.5□□□□□ -0.89
SMARCA5-203ENST00000515531 TMEM229AB2RXF0 380 aa9.49□□□□□ -0.89
SMARCA5-203ENST00000515531 WASLO00401 505 aaPredicted RBP9.49□□□□□ -0.89
SMARCA5-203ENST00000515531 TLR1Q15399 786 aa9.49□□□□□ -0.89
SMARCA5-203ENST00000515531 TREML4Q6UXN2 200 aa9.49□□□□□ -0.89
SMARCA5-203ENST00000515531 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.49□□□□□ -0.89
SMARCA5-203ENST00000515531 ZSCAN10Q96SZ4 725 aaPredicted RBP9.49□□□□□ -0.89
SMARCA5-203ENST00000515531 KIAA1024Q9UPX6 916 aa9.49□□□□□ -0.89
SMARCA5-203ENST00000515531 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.48□□□□□ -0.89
SMARCA5-203ENST00000515531 TMEM214Q6NUQ4 689 aaKnown RBP9.48□□□□□ -0.89
SMARCA5-203ENST00000515531 ARID3AQ99856 593 aa9.48□□□□□ -0.89
SMARCA5-203ENST00000515531 GRIP2Q9C0E4 1043 aa9.48□□□□□ -0.89
SMARCA5-203ENST00000515531 FAM196BA6NMK8 535 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 USP17L15C9J2P7 530 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 USP17L10C9JJH3 530 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 USP17L13C9JLJ4 530 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 USP17L12C9JPN9 530 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 USP17L11C9JVI0 530 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 USP17L21D6R901 530 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 USP17L18D6R9N7 530 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 USP17L22D6RA61 530 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 USP17L17D6RBQ6 530 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 USP17L19D6RCP7 530 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 USP17L20D6RJB6 530 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 SMTNP53814 917 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 USP17L24Q0WX57 530 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 PTK7Q13308 1070 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 CRTC2Q53ET0 693 aaPredicted RBP9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 SIX5Q8N196 739 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 ZNF358Q9NW07 568 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 HRH3Q9Y5N1 445 aa9.47□□□□□ -0.89
SMARCA5-203ENST00000515531 SEC13P55735 322 aa9.46□□□□□ -0.9
SMARCA5-203ENST00000515531 PBXIP1Q96AQ6 731 aa9.46□□□□□ -0.9
SMARCA5-203ENST00000515531 SLC4A9Q96Q91 983 aa9.46□□□□□ -0.9
SMARCA5-203ENST00000515531 DPYDQ12882 1025 aa9.45□□□□□ -0.9
SMARCA5-203ENST00000515531 GNASQ5JWF2 1037 aa9.45□□□□□ -0.9
SMARCA5-203ENST00000515531 FHDC1Q9C0D6 1143 aaPredicted RBP9.45□□□□□ -0.9
SMARCA5-203ENST00000515531 A6NJY4 79 aa9.44□□□□□ -0.9
SMARCA5-203ENST00000515531 SFI1A8K8P3 1242 aa9.44□□□□□ -0.9
SMARCA5-203ENST00000515531 POU4F2Q12837 409 aa9.44□□□□□ -0.9
SMARCA5-203ENST00000515531 TAS1R3Q7RTX0 852 aa9.44□□□□□ -0.9
SMARCA5-203ENST00000515531 ANKMY2Q8IV38 441 aa9.44□□□□□ -0.9
SMARCA5-203ENST00000515531 FAM200AQ8TCP9 573 aa9.44□□□□□ -0.9
SMARCA5-203ENST00000515531 ACIN1Q9UKV3 1341 aaKnown RBP9.43□□□□□ -0.9
SMARCA5-203ENST00000515531 M0R2N6 131 aa9.43□□□□□ -0.9
SMARCA5-203ENST00000515531 RHOQP17081 205 aa9.43□□□□□ -0.9
SMARCA5-203ENST00000515531 PTSQ03393 145 aa9.43□□□□□ -0.9
SMARCA5-203ENST00000515531 SPATA31C2B4DYI2 1134 aa9.42□□□□□ -0.9
SMARCA5-203ENST00000515531 CDK2AP1O14519 115 aa9.42□□□□□ -0.9
SMARCA5-203ENST00000515531 SRPK2P78362 688 aaKnown RBP9.42□□□□□ -0.9
SMARCA5-203ENST00000515531 NBPF10Q6P3W6 841 aaKnown RBP9.42□□□□□ -0.9
SMARCA5-203ENST00000515531 PPARGC1BQ86YN6 1023 aaKnown RBP9.42□□□□□ -0.9
SMARCA5-203ENST00000515531 NBPF15Q8N660 670 aa9.42□□□□□ -0.9
SMARCA5-203ENST00000515531 RHBDD1Q8TEB9 315 aa9.42□□□□□ -0.9
SMARCA5-203ENST00000515531 HINFPQ9BQA5 517 aa9.42□□□□□ -0.9
SMARCA5-203ENST00000515531 NOVA2Q9UNW9 492 aaKnown RBP9.42□□□□□ -0.9
SMARCA5-203ENST00000515531 PPP1R15AO75807 674 aaPredicted RBP9.41□□□□□ -0.9
SMARCA5-203ENST00000515531 DKK1O94907 266 aa9.41□□□□□ -0.9
SMARCA5-203ENST00000515531 PHKA2P46019 1235 aa9.41□□□□□ -0.9
SMARCA5-203ENST00000515531 MTFR1Q15390 333 aa9.41□□□□□ -0.9
SMARCA5-203ENST00000515531 WDR44Q5JSH3 913 aa9.41□□□□□ -0.9
SMARCA5-203ENST00000515531 TNS4Q8IZW8 715 aa9.41□□□□□ -0.9
SMARCA5-203ENST00000515531 NXF1Q9UBU9 619 aaKnown RBP9.41□□□□□ -0.9
SMARCA5-203ENST00000515531 WFS1O76024 890 aa9.4□□□□□ -0.9
SMARCA5-203ENST00000515531 ATG7O95352 703 aa9.4□□□□□ -0.9
SMARCA5-203ENST00000515531 INSM1Q01101 510 aaPredicted RBP9.4□□□□□ -0.9
SMARCA5-203ENST00000515531 ELOAQ14241 798 aaKnown RBP9.4□□□□□ -0.9
SMARCA5-203ENST00000515531 TSEN2Q8NCE0 465 aaKnown RBP9.4□□□□□ -0.9
SMARCA5-203ENST00000515531 NIFKQ9BYG3 293 aaKnown RBP9.4□□□□□ -0.9
SMARCA5-203ENST00000515531 TIMMDC1Q9NPL8 285 aa9.4□□□□□ -0.9
SMARCA5-203ENST00000515531 C4orf17Q53FE4 359 aa9.39□□□□□ -0.91
SMARCA5-203ENST00000515531 CCDC155Q8N6L0 562 aa9.39□□□□□ -0.91
SMARCA5-203ENST00000515531 ARXQ96QS3 562 aa9.39□□□□□ -0.91
SMARCA5-203ENST00000515531 CABP1Q9NZU7 370 aa9.39□□□□□ -0.91
SMARCA5-203ENST00000515531 SCHIP1Q9P0W5 487 aaPredicted RBP9.39□□□□□ -0.91
SMARCA5-203ENST00000515531 SLC35F4A4IF30 521 aa9.38□□□□□ -0.91
SMARCA5-203ENST00000515531 CHMP3Q9Y3E7 222 aa9.38□□□□□ -0.91
SMARCA5-203ENST00000515531 TBCELQ5QJ74 424 aa9.37□□□□□ -0.91
SMARCA5-203ENST00000515531 SLC9A9Q8IVB4 645 aa9.37□□□□□ -0.91
SMARCA5-203ENST00000515531 NPAS3Q8IXF0 933 aa9.37□□□□□ -0.91
SMARCA5-203ENST00000515531 SLC16A10Q8TF71 515 aa9.37□□□□□ -0.91
SMARCA5-203ENST00000515531 GAS2L1Q99501 681 aaPredicted RBP9.37□□□□□ -0.91
SMARCA5-203ENST00000515531 STK17AQ9UEE5 414 aa9.37□□□□□ -0.91
SMARCA5-203ENST00000515531 DYRK1BQ9Y463 629 aa9.37□□□□□ -0.91
SMARCA5-203ENST00000515531 TERTO14746 1132 aaKnown RBP9.36□□□□□ -0.91
SMARCA5-203ENST00000515531 PPFIA3O75145 1194 aa9.36□□□□□ -0.91
SMARCA5-203ENST00000515531 PLA2G4AP47712 749 aa9.36□□□□□ -0.91
SMARCA5-203ENST00000515531 VEGFBP49765 207 aa9.36□□□□□ -0.91
SMARCA5-203ENST00000515531 EPHA4P54764 986 aa9.36□□□□□ -0.91
SMARCA5-203ENST00000515531 FOXK2Q01167 660 aa9.36□□□□□ -0.91
SMARCA5-203ENST00000515531 AIDAQ96BJ3 306 aa9.36□□□□□ -0.91
SMARCA5-203ENST00000515531 IQSEC3Q9UPP2 1182 aaPredicted RBP9.36□□□□□ -0.91
SMARCA5-203ENST00000515531 SENP3-EIF4A1A0A087X0R7 540 aa9.35□□□□□ -0.91
SMARCA5-203ENST00000515531 A0A1B0GTH6 734 aa9.35□□□□□ -0.91
SMARCA5-203ENST00000515531 RIPOR1Q6ZS17 1223 aa9.35□□□□□ -0.91
SMARCA5-203ENST00000515531 TSPAN10Q9H1Z9 355 aaPredicted RBP9.35□□□□□ -0.91
SMARCA5-203ENST00000515531 ZMIZ1Q9ULJ6 1067 aa9.35□□□□□ -0.91
SMARCA5-203ENST00000515531 ZNF232Q9UNY5 417 aa9.35□□□□□ -0.91
SMARCA5-203ENST00000515531 SCG3Q8WXD2 468 aaKnown RBP9.34□□□□□ -0.91
SMARCA5-203ENST00000515531 USP3Q9Y6I4 520 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms