RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	API5	Q9BZZ5	524 aa	Known RBP	13.23	□□□□□ -0.29
CDK18-222	ENST00000515494	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK18-222	ENST00000515494	NUTM2E	B1AL46	878 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK18-222	ENST00000515494	EVA1C	P58658	441 aa		13.23	□□□□□ -0.29
CDK18-222	ENST00000515494	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK18-222	ENST00000515494	ADAMTS2	O95450	1211 aa		13.23	□□□□□ -0.29
CDK18-222	ENST00000515494	LNPK	Q9C0E8	428 aa		13.23	□□□□□ -0.29
CDK18-222	ENST00000515494	SLC4A10	Q6U841	1118 aa		13.22	□□□□□ -0.29
CDK18-222	ENST00000515494	USP54	Q70EL1	1684 aa		13.22	□□□□□ -0.29
CDK18-222	ENST00000515494	SLC4A3	P48751	1232 aa		13.22	□□□□□ -0.29
CDK18-222	ENST00000515494	TEF	Q10587	303 aa		13.22	□□□□□ -0.29
CDK18-222	ENST00000515494	SIRT2	Q8IXJ6	389 aa		13.22	□□□□□ -0.29
CDK18-222	ENST00000515494	EIF2S2	P20042	333 aa	Known RBP	13.22	□□□□□ -0.29
CDK18-222	ENST00000515494	TAT	P17735	454 aa	Predicted RBP	13.21	□□□□□ -0.29
CDK18-222	ENST00000515494	TAF7	Q15545	349 aa	Predicted RBP	13.21	□□□□□ -0.29
CDK18-222	ENST00000515494	LARP1	Q6PKG0	1096 aa	Known RBP	13.21	□□□□□ -0.29
CDK18-222	ENST00000515494	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.21	□□□□□ -0.29
CDK18-222	ENST00000515494	SMC5	Q8IY18	1101 aa		13.21	□□□□□ -0.29
CDK18-222	ENST00000515494	HTATSF1	O43719	755 aa	Known RBP	13.2	□□□□□ -0.3
CDK18-222	ENST00000515494	BTG4	Q9NY30	223 aa		13.19	□□□□□ -0.3
CDK18-222	ENST00000515494	RGS12	O14924	1447 aa		13.19	□□□□□ -0.3
CDK18-222	ENST00000515494	UBAP1L	F5GYI3	381 aa		13.19	□□□□□ -0.3
CDK18-222	ENST00000515494	SLC39A6	Q13433	755 aa		13.19	□□□□□ -0.3
CDK18-222	ENST00000515494	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.19	□□□□□ -0.3
CDK18-222	ENST00000515494	AKAP4	Q5JQC9	854 aa		13.19	□□□□□ -0.3
CDK18-222	ENST00000515494	ANXA1	P04083	346 aa		13.19	□□□□□ -0.3
CDK18-222	ENST00000515494	ANKRD45	Q5TZF3	282 aa		13.19	□□□□□ -0.3
CDK18-222	ENST00000515494	DDX54	Q8TDD1	881 aa	Known RBP	13.19	□□□□□ -0.3
CDK18-222	ENST00000515494	MEIS3	Q99687	375 aa		13.19	□□□□□ -0.3
CDK18-222	ENST00000515494	BTBD11	A6QL63	1104 aa		13.18	□□□□□ -0.3
CDK18-222	ENST00000515494	RNMT	O43148	476 aa	Known RBP	13.18	□□□□□ -0.3
CDK18-222	ENST00000515494	AMOT	Q4VCS5	1084 aa		13.18	□□□□□ -0.3
CDK18-222	ENST00000515494	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.18	□□□□□ -0.3
CDK18-222	ENST00000515494	INTS3	Q68E01	1043 aa	Known RBP	13.18	□□□□□ -0.3
CDK18-222	ENST00000515494	STK31	Q9BXU1	1019 aa		13.18	□□□□□ -0.3
CDK18-222	ENST00000515494	PRAMEF22	A3QJZ6	481 aa		13.17	□□□□□ -0.3
CDK18-222	ENST00000515494	MEGF6	O75095	1541 aa		13.17	□□□□□ -0.3
CDK18-222	ENST00000515494	CAMTA1	Q9Y6Y1	1673 aa		13.17	□□□□□ -0.3
CDK18-222	ENST00000515494	NUCB1	Q02818	461 aa		13.17	□□□□□ -0.3
CDK18-222	ENST00000515494	FKBP5	Q13451	457 aa	Predicted RBP	13.17	□□□□□ -0.3
CDK18-222	ENST00000515494	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.17	□□□□□ -0.3
CDK18-222	ENST00000515494	APBB1	O00213	710 aa		13.16	□□□□□ -0.3
CDK18-222	ENST00000515494	CHD1L	Q86WJ1	897 aa		13.16	□□□□□ -0.3
CDK18-222	ENST00000515494	CYP27B1	O15528	508 aa		13.16	□□□□□ -0.3
CDK18-222	ENST00000515494	NFATC2IP	Q8NCF5	419 aa		13.16	□□□□□ -0.3
CDK18-222	ENST00000515494	PTPRC	P08575	1304 aa		13.16	□□□□□ -0.3
CDK18-222	ENST00000515494	FLII	Q13045	1269 aa		13.15	□□□□□ -0.3
CDK18-222	ENST00000515494	KAT6B	Q8WYB5	2073 aa		13.15	□□□□□ -0.3
CDK18-222	ENST00000515494	HDGFL1	Q5TGJ6	251 aa		13.15	□□□□□ -0.3
CDK18-222	ENST00000515494	CCDC30	Q5VVM6	783 aa		13.15	□□□□□ -0.3
CDK18-222	ENST00000515494	PHAX	Q9H814	394 aa	Known RBP	13.15	□□□□□ -0.3
CDK18-222	ENST00000515494	SPG7	Q9UQ90	795 aa		13.15	□□□□□ -0.3
CDK18-222	ENST00000515494	ROBO1	Q9Y6N7	1651 aa		13.15	□□□□□ -0.3
CDK18-222	ENST00000515494	WDR17	Q8IZU2	1322 aa		13.15	□□□□□ -0.3
CDK18-222	ENST00000515494	CHMP4B	Q9H444	224 aa	Known RBP	13.15	□□□□□ -0.31
CDK18-222	ENST00000515494	FAM43A	Q8N2R8	423 aa		13.14	□□□□□ -0.31
CDK18-222	ENST00000515494	LTBP4	Q8N2S1	1624 aa		13.14	□□□□□ -0.31
CDK18-222	ENST00000515494	CPD	O75976	1380 aa		13.14	□□□□□ -0.31
CDK18-222	ENST00000515494	CEMIP	Q8WUJ3	1361 aa		13.14	□□□□□ -0.31
CDK18-222	ENST00000515494		A0A0G2JS52	829 aa		13.14	□□□□□ -0.31
CDK18-222	ENST00000515494	PHKG2	P15735	406 aa		13.14	□□□□□ -0.31
CDK18-222	ENST00000515494	TOM1	O60784	492 aa		13.14	□□□□□ -0.31
CDK18-222	ENST00000515494	PIP4K2A	P48426	406 aa	Predicted RBP	13.13	□□□□□ -0.31
CDK18-222	ENST00000515494	EIF4A1	P60842	406 aa	Known RBP	13.13	□□□□□ -0.31
CDK18-222	ENST00000515494	COL18A1	P39060	1754 aa		13.13	□□□□□ -0.31
CDK18-222	ENST00000515494	IFNL2	Q8IZJ0	200 aa		13.12	□□□□□ -0.31
CDK18-222	ENST00000515494	LRRC37A3	O60309	1634 aa		13.12	□□□□□ -0.31
CDK18-222	ENST00000515494	CEP85	Q6P2H3	762 aa		13.12	□□□□□ -0.31
CDK18-222	ENST00000515494	CCDC9	Q9Y3X0	531 aa	Known RBP	13.12	□□□□□ -0.31
CDK18-222	ENST00000515494	GCC1	Q96CN9	775 aa		13.11	□□□□□ -0.31
CDK18-222	ENST00000515494	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.11	□□□□□ -0.31
CDK18-222	ENST00000515494	ZCRB1	Q8TBF4	217 aa	Known RBP	13.11	□□□□□ -0.31
CDK18-222	ENST00000515494	CHPF2	Q9P2E5	772 aa		13.11	□□□□□ -0.31
CDK18-222	ENST00000515494	MFAP1	P55081	439 aa	Known RBP	13.11	□□□□□ -0.31
CDK18-222	ENST00000515494	COL5A2	P05997	1499 aa	Predicted RBP	13.11	□□□□□ -0.31
CDK18-222	ENST00000515494	SMARCA5	O60264	1052 aa	Predicted RBP	13.1	□□□□□ -0.31
CDK18-222	ENST00000515494	HSP90AA1	P07900	732 aa	Known RBP	13.1	□□□□□ -0.31
CDK18-222	ENST00000515494	ATP10D	Q9P241	1426 aa		13.1	□□□□□ -0.31
CDK18-222	ENST00000515494	IL2RB	P14784	551 aa		13.1	□□□□□ -0.31
CDK18-222	ENST00000515494	ANKRD44	Q8N8A2	993 aa		13.1	□□□□□ -0.31
CDK18-222	ENST00000515494	DDRGK1	Q96HY6	314 aa		13.1	□□□□□ -0.31
CDK18-222	ENST00000515494	RBM10	P98175	930 aa	Known RBP	13.1	□□□□□ -0.31
CDK18-222	ENST00000515494	CRYBG1	Q9Y4K1	1723 aa		13.1	□□□□□ -0.31
CDK18-222	ENST00000515494	CABP4	P57796	275 aa		13.09	□□□□□ -0.31
CDK18-222	ENST00000515494	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.09	□□□□□ -0.31
CDK18-222	ENST00000515494	NHSL1	Q5SYE7	1610 aa		13.09	□□□□□ -0.31
CDK18-222	ENST00000515494	CCT4	P50991	539 aa	Known RBP	13.09	□□□□□ -0.31
CDK18-222	ENST00000515494	CARD10	Q9BWT7	1032 aa		13.09	□□□□□ -0.31
CDK18-222	ENST00000515494	KDM6A	O15550	1401 aa	Predicted RBP	13.09	□□□□□ -0.31
CDK18-222	ENST00000515494	AIMP1	Q12904	312 aa	Known RBP	13.08	□□□□□ -0.31
CDK18-222	ENST00000515494	PROSER3	Q2NL68	480 aa		13.08	□□□□□ -0.31
CDK18-222	ENST00000515494	DCTPP1	Q9H773	170 aa		13.08	□□□□□ -0.31
CDK18-222	ENST00000515494	SLC52A2	Q9HAB3	445 aa		13.08	□□□□□ -0.31
CDK18-222	ENST00000515494	BABAM1	Q9NWV8	329 aa		13.08	□□□□□ -0.31
CDK18-222	ENST00000515494	NCAPD2	Q15021	1401 aa		13.08	□□□□□ -0.32
CDK18-222	ENST00000515494	PTCD1	O75127	700 aa	Known RBP	13.07	□□□□□ -0.32
CDK18-222	ENST00000515494	NFKBIB	Q15653	356 aa		13.07	□□□□□ -0.32
CDK18-222	ENST00000515494	ZNF496	Q96IT1	587 aa	Predicted RBP	13.07	□□□□□ -0.32
CDK18-222	ENST00000515494	MYL6B	P14649	208 aa		13.07	□□□□□ -0.32
CDK18-222	ENST00000515494	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms