RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 OVOS2A0A0G2JMS6 1433 aa11.69□□□□□ -0.54
CPNE4-213ENST00000515418 KDM6AO15550 1401 aaPredicted RBP11.69□□□□□ -0.54
CPNE4-213ENST00000515418 MVPQ14764 893 aaKnown RBP11.68□□□□□ -0.54
CPNE4-213ENST00000515418 G2E3Q7L622 706 aa11.68□□□□□ -0.54
CPNE4-213ENST00000515418 ITPRIPQ8IWB1 547 aa11.68□□□□□ -0.54
CPNE4-213ENST00000515418 EIF2S2P20042 333 aaKnown RBP11.68□□□□□ -0.54
CPNE4-213ENST00000515418 KAT6BQ8WYB5 2073 aa11.68□□□□□ -0.54
CPNE4-213ENST00000515418 COL14A1Q05707 1796 aaKnown RBP11.68□□□□□ -0.54
CPNE4-213ENST00000515418 DCAF5Q96JK2 942 aa11.67□□□□□ -0.54
CPNE4-213ENST00000515418 SLC52A2Q9HAB3 445 aa11.67□□□□□ -0.54
CPNE4-213ENST00000515418 PRAMEF22A3QJZ6 481 aa11.67□□□□□ -0.54
CPNE4-213ENST00000515418 MS4A1P11836 297 aa11.67□□□□□ -0.54
CPNE4-213ENST00000515418 SKAP1Q86WV1 359 aa11.67□□□□□ -0.54
CPNE4-213ENST00000515418 ARHGAP45Q92619 1136 aa11.67□□□□□ -0.54
CPNE4-213ENST00000515418 SCN11AQ9UI33 1791 aa11.66□□□□□ -0.54
CPNE4-213ENST00000515418 IGHDP01880 384 aa11.66□□□□□ -0.54
CPNE4-213ENST00000515418 PCDHB15Q9Y5E8 787 aa11.66□□□□□ -0.54
CPNE4-213ENST00000515418 PKD1L3Q7Z443 1732 aa11.66□□□□□ -0.54
CPNE4-213ENST00000515418 CCDC30Q5VVM6 783 aa11.65□□□□□ -0.54
CPNE4-213ENST00000515418 KDM3BQ7LBC6 1761 aa11.65□□□□□ -0.54
CPNE4-213ENST00000515418 PCDH11XQ9BZA7 1347 aa11.65□□□□□ -0.54
CPNE4-213ENST00000515418 PCDH11YQ9BZA8 1340 aa11.65□□□□□ -0.54
CPNE4-213ENST00000515418 CABP4P57796 275 aa11.65□□□□□ -0.55
CPNE4-213ENST00000515418 ZNF790Q6PG37 636 aa11.65□□□□□ -0.55
CPNE4-213ENST00000515418 PELP1Q8IZL8 1130 aaKnown RBP11.65□□□□□ -0.55
CPNE4-213ENST00000515418 STK31Q9BXU1 1019 aa11.65□□□□□ -0.55
CPNE4-213ENST00000515418 SIPA1L3O60292 1781 aaPredicted RBP11.64□□□□□ -0.55
CPNE4-213ENST00000515418 PARP4Q9UKK3 1724 aaKnown RBP11.64□□□□□ -0.55
CPNE4-213ENST00000515418 ADAMTS7Q9UKP4 1686 aa11.64□□□□□ -0.55
CPNE4-213ENST00000515418 F6X3S4 739 aa11.64□□□□□ -0.55
CPNE4-213ENST00000515418 HSP90AB1P08238 724 aaKnown RBP11.64□□□□□ -0.55
CPNE4-213ENST00000515418 HSPA1LP34931 641 aa11.64□□□□□ -0.55
CPNE4-213ENST00000515418 HDGFL1Q5TGJ6 251 aa11.64□□□□□ -0.55
CPNE4-213ENST00000515418 NGLY1Q96IV0 654 aa11.64□□□□□ -0.55
CPNE4-213ENST00000515418 C8orf37Q96NL8 207 aa11.64□□□□□ -0.55
CPNE4-213ENST00000515418 CCDC9Q9Y3X0 531 aaKnown RBP11.64□□□□□ -0.55
CPNE4-213ENST00000515418 GIGYF1O75420 1035 aaPredicted RBP11.63□□□□□ -0.55
CPNE4-213ENST00000515418 ANXA1P04083 346 aa11.63□□□□□ -0.55
CPNE4-213ENST00000515418 API5Q9BZZ5 524 aaKnown RBP11.63□□□□□ -0.55
CPNE4-213ENST00000515418 PHAXQ9H814 394 aaKnown RBP11.63□□□□□ -0.55
CPNE4-213ENST00000515418 DDX19BQ9UMR2 479 aa11.63□□□□□ -0.55
CPNE4-213ENST00000515418 KDM2BQ8NHM5 1336 aa11.63□□□□□ -0.55
CPNE4-213ENST00000515418 CHPF2Q9P2E5 772 aa11.63□□□□□ -0.55
CPNE4-213ENST00000515418 PLCH1Q4KWH8 1693 aa11.63□□□□□ -0.55
CPNE4-213ENST00000515418 JCADQ9P266 1359 aa11.63□□□□□ -0.55
CPNE4-213ENST00000515418 ABCC4O15439 1325 aa11.62□□□□□ -0.55
CPNE4-213ENST00000515418 ZBTB7BO15156 539 aaPredicted RBP11.62□□□□□ -0.55
CPNE4-213ENST00000515418 NKX1-1Q15270 411 aaPredicted RBP11.62□□□□□ -0.55
CPNE4-213ENST00000515418 SLC4A10Q6U841 1118 aa11.62□□□□□ -0.55
CPNE4-213ENST00000515418 ZNF496Q96IT1 587 aaPredicted RBP11.62□□□□□ -0.55
CPNE4-213ENST00000515418 ZBTB40Q9NUA8 1239 aa11.62□□□□□ -0.55
CPNE4-213ENST00000515418 SHANK3Q9BYB0 1731 aa11.62□□□□□ -0.55
CPNE4-213ENST00000515418 SPATA31A1Q5TZJ5 1347 aa11.62□□□□□ -0.55
CPNE4-213ENST00000515418 EXOC5O00471 708 aa11.61□□□□□ -0.55
CPNE4-213ENST00000515418 FLIIQ13045 1269 aa11.61□□□□□ -0.55
CPNE4-213ENST00000515418 HEG1Q9ULI3 1381 aa11.61□□□□□ -0.55
CPNE4-213ENST00000515418 RGS12O14924 1447 aa11.61□□□□□ -0.55
CPNE4-213ENST00000515418 FKBP5Q13451 457 aaPredicted RBP11.61□□□□□ -0.55
CPNE4-213ENST00000515418 C1orf115Q9H7X2 142 aa11.61□□□□□ -0.55
CPNE4-213ENST00000515418 PLEKHG2Q9H7P9 1386 aa11.61□□□□□ -0.55
CPNE4-213ENST00000515418 PTPRCP08575 1304 aa11.6□□□□□ -0.55
CPNE4-213ENST00000515418 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
CPNE4-213ENST00000515418 CACNA1FO60840 1977 aa11.6□□□□□ -0.55
CPNE4-213ENST00000515418 ERVV-2B6SEH9 535 aa11.6□□□□□ -0.55
CPNE4-213ENST00000515418 PROSER3Q2NL68 480 aa11.6□□□□□ -0.55
CPNE4-213ENST00000515418 CENPQQ7L2Z9 268 aaPredicted RBP11.6□□□□□ -0.55
CPNE4-213ENST00000515418 TTC5Q8N0Z6 440 aa11.6□□□□□ -0.55
CPNE4-213ENST00000515418 SPATA31A5Q5VU36 1347 aa11.6□□□□□ -0.55
CPNE4-213ENST00000515418 SPATA31A7Q8IWB4 1347 aa11.6□□□□□ -0.55
CPNE4-213ENST00000515418 HOXB7P09629 217 aa11.59□□□□□ -0.55
CPNE4-213ENST00000515418 INTS3Q68E01 1043 aaKnown RBP11.59□□□□□ -0.55
CPNE4-213ENST00000515418 UNC5CLQ8IV45 518 aa11.59□□□□□ -0.55
CPNE4-213ENST00000515418 USP16Q9Y5T5 823 aa11.59□□□□□ -0.55
CPNE4-213ENST00000515418 DISP2A7MBM2 1401 aa11.59□□□□□ -0.55
CPNE4-213ENST00000515418 SLIT2O94813 1529 aa11.59□□□□□ -0.55
CPNE4-213ENST00000515418 AAMPQ13685 434 aa11.59□□□□□ -0.55
CPNE4-213ENST00000515418 NRAPQ86VF7 1730 aa11.59□□□□□ -0.55
CPNE4-213ENST00000515418 PTCD1O75127 700 aaKnown RBP11.58□□□□□ -0.56
CPNE4-213ENST00000515418 PIP4K2AP48426 406 aaPredicted RBP11.58□□□□□ -0.56
CPNE4-213ENST00000515418 FAM98CQ17RN3 349 aaKnown RBP11.58□□□□□ -0.56
CPNE4-213ENST00000515418 PIGBQ92521 554 aa11.58□□□□□ -0.56
CPNE4-213ENST00000515418 FMNL2Q96PY5 1086 aa11.58□□□□□ -0.56
CPNE4-213ENST00000515418 TSHZ2Q9NRE2 1034 aa11.58□□□□□ -0.56
CPNE4-213ENST00000515418 DBF4Q9UBU7 674 aaPredicted RBP11.58□□□□□ -0.56
CPNE4-213ENST00000515418 MRC1P22897 1456 aa11.57□□□□□ -0.56
CPNE4-213ENST00000515418 BCL9LQ86UU0 1499 aa11.57□□□□□ -0.56
CPNE4-213ENST00000515418 LRP6O75581 1613 aa11.57□□□□□ -0.56
CPNE4-213ENST00000515418 SNRPA1P09661 255 aaKnown RBP11.57□□□□□ -0.56
CPNE4-213ENST00000515418 PDIA6Q15084 440 aa11.57□□□□□ -0.56
CPNE4-213ENST00000515418 DDB1Q16531 1140 aa11.57□□□□□ -0.56
CPNE4-213ENST00000515418 RWDD1Q9H446 243 aaPredicted RBP11.57□□□□□ -0.56
CPNE4-213ENST00000515418 TMOD3Q9NYL9 352 aa11.57□□□□□ -0.56
CPNE4-213ENST00000515418 ASAP1Q9ULH1 1129 aa11.57□□□□□ -0.56
CPNE4-213ENST00000515418 THRAP3Q9Y2W1 955 aaKnown RBP11.57□□□□□ -0.56
CPNE4-213ENST00000515418 PI4KAP2A4QPH2 592 aa11.56□□□□□ -0.56
CPNE4-213ENST00000515418 MYL6BP14649 208 aa11.56□□□□□ -0.56
CPNE4-213ENST00000515418 AIMP1Q12904 312 aaKnown RBP11.56□□□□□ -0.56
CPNE4-213ENST00000515418 FNBP4Q8N3X1 1017 aaPredicted RBP11.56□□□□□ -0.56
CPNE4-213ENST00000515418 PI4KAP1Q8N8J0 262 aa11.56□□□□□ -0.56
CPNE4-213ENST00000515418 SYTL4Q96C24 671 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms