RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 PCGF6Q9BYE7 350 aa20.67■□□□□ 0.9
DDR1-278ENST00000515233 PANK3Q9H999 370 aa20.67■□□□□ 0.9
DDR1-278ENST00000515233 GNPATO15228 680 aa20.66■□□□□ 0.9
DDR1-278ENST00000515233 HSP90AB1P08238 724 aaKnown RBP20.66■□□□□ 0.9
DDR1-278ENST00000515233 DCAF5Q96JK2 942 aa20.66■□□□□ 0.9
DDR1-278ENST00000515233 HSPA5P11021 654 aaKnown RBP20.65■□□□□ 0.9
DDR1-278ENST00000515233 PLEKHO1Q53GL0 409 aaPredicted RBP20.65■□□□□ 0.9
DDR1-278ENST00000515233 ZNF831Q5JPB2 1677 aa20.64■□□□□ 0.9
DDR1-278ENST00000515233 KDRP35968 1356 aa20.63■□□□□ 0.89
DDR1-278ENST00000515233 AMOTQ4VCS5 1084 aa20.63■□□□□ 0.89
DDR1-278ENST00000515233 SLC4A9Q96Q91 983 aa20.63■□□□□ 0.89
DDR1-278ENST00000515233 ATP10DQ9P241 1426 aa20.62■□□□□ 0.89
DDR1-278ENST00000515233 TRAPPC3LQ5T215 181 aa20.62■□□□□ 0.89
DDR1-278ENST00000515233 RC3H1Q5TC82 1133 aaKnown RBP20.62■□□□□ 0.89
DDR1-278ENST00000515233 RTCBQ9Y3I0 505 aaKnown RBP20.62■□□□□ 0.89
DDR1-278ENST00000515233 ADCY9O60503 1353 aa20.61■□□□□ 0.89
DDR1-278ENST00000515233 NLGN1Q8N2Q7 840 aa20.61■□□□□ 0.89
DDR1-278ENST00000515233 MMP10P09238 476 aa20.6■□□□□ 0.89
DDR1-278ENST00000515233 RBM42Q9BTD8 480 aaKnown RBP20.6■□□□□ 0.89
DDR1-278ENST00000515233 ADRA2BP18089 450 aa20.59■□□□□ 0.89
DDR1-278ENST00000515233 ZNF530Q6P9A1 599 aaPredicted RBP20.59■□□□□ 0.89
DDR1-278ENST00000515233 MORC1Q86VD1 984 aa20.59■□□□□ 0.89
DDR1-278ENST00000515233 GPBP1L1Q9HC44 474 aaPredicted RBP20.59■□□□□ 0.89
DDR1-278ENST00000515233 CNTNAP4Q9C0A0 1308 aa20.58■□□□□ 0.89
DDR1-278ENST00000515233 RPS6KA4O75676 772 aa20.58■□□□□ 0.89
DDR1-278ENST00000515233 CABP4P57796 275 aa20.58■□□□□ 0.89
DDR1-278ENST00000515233 TGFB2P61812 414 aa20.58■□□□□ 0.89
DDR1-278ENST00000515233 ARHGEF1Q92888 912 aaKnown RBP20.58■□□□□ 0.89
DDR1-278ENST00000515233 KDM6AO15550 1401 aaPredicted RBP20.58■□□□□ 0.88
DDR1-278ENST00000515233 KIF13BQ9NQT8 1826 aa20.57■□□□□ 0.88
DDR1-278ENST00000515233 COL5A3P25940 1745 aaPredicted RBP20.57■□□□□ 0.88
DDR1-278ENST00000515233 MTHFSP49914 203 aa20.56■□□□□ 0.88
DDR1-278ENST00000515233 WWC3Q9ULE0 1092 aa20.56■□□□□ 0.88
DDR1-278ENST00000515233 C1orf141Q5JVX7 400 aa20.55■□□□□ 0.88
DDR1-278ENST00000515233 AEBP1Q8IUX7 1158 aa20.55■□□□□ 0.88
DDR1-278ENST00000515233 GYS1P13807 737 aa20.54■□□□□ 0.88
DDR1-278ENST00000515233 RFC4P35249 363 aa20.54■□□□□ 0.88
DDR1-278ENST00000515233 SULT6B1Q6IMI4 303 aa20.54■□□□□ 0.88
DDR1-278ENST00000515233 NFATC2IPQ8NCF5 419 aa20.54■□□□□ 0.88
DDR1-278ENST00000515233 KNSTRNQ9Y448 316 aa20.54■□□□□ 0.88
DDR1-278ENST00000515233 IL13P35225 146 aa20.53■□□□□ 0.88
DDR1-278ENST00000515233 PXDNLA1KZ92 1463 aa20.53■□□□□ 0.88
DDR1-278ENST00000515233 MYH14Q7Z406 1995 aaKnown RBP20.53■□□□□ 0.88
DDR1-278ENST00000515233 KIAA1551Q9HCM1 1747 aa20.53■□□□□ 0.88
DDR1-278ENST00000515233 CICQ96RK0 1608 aaPredicted RBP20.53■□□□□ 0.88
DDR1-278ENST00000515233 PTCD1O75127 700 aaKnown RBP20.51■□□□□ 0.87
DDR1-278ENST00000515233 CCDC87Q9NVE4 849 aa20.51■□□□□ 0.87
DDR1-278ENST00000515233 C10orf71Q711Q0 1435 aa20.51■□□□□ 0.87
DDR1-278ENST00000515233 N4BP2Q86UW6 1770 aaPredicted RBP20.5■□□□□ 0.87
DDR1-278ENST00000515233 A0A0G2JLW4 131 aa20.5■□□□□ 0.87
DDR1-278ENST00000515233 ZNF526Q8TF50 670 aaPredicted RBP20.5■□□□□ 0.87
DDR1-278ENST00000515233 PARP3Q9Y6F1 533 aa20.5■□□□□ 0.87
DDR1-278ENST00000515233 C4AP0C0L4 1744 aa20.5■□□□□ 0.87
DDR1-278ENST00000515233 CRKLP46109 303 aaKnown RBP20.49■□□□□ 0.87
DDR1-278ENST00000515233 AMER1Q5JTC6 1135 aaPredicted RBP20.49■□□□□ 0.87
DDR1-278ENST00000515233 CEP350Q5VT06 3117 aa20.49■□□□□ 0.87
DDR1-278ENST00000515233 AKAP4Q5JQC9 854 aa20.48■□□□□ 0.87
DDR1-278ENST00000515233 BCS1LQ9Y276 419 aa20.48■□□□□ 0.87
DDR1-278ENST00000515233 SCN11AQ9UI33 1791 aa20.48■□□□□ 0.87
DDR1-278ENST00000515233 CCER1Q8TC90 406 aaPredicted RBP20.47■□□□□ 0.87
DDR1-278ENST00000515233 KIF3CO14782 793 aa20.46■□□□□ 0.87
DDR1-278ENST00000515233 DPEP1P16444 411 aa20.46■□□□□ 0.87
DDR1-278ENST00000515233 HSPA6P17066 643 aa20.46■□□□□ 0.87
DDR1-278ENST00000515233 USP42Q9H9J4 1324 aaKnown RBP20.46■□□□□ 0.87
DDR1-278ENST00000515233 KCNA3P22001 575 aa20.45■□□□□ 0.86
DDR1-278ENST00000515233 SLC52A2Q9HAB3 445 aa20.45■□□□□ 0.86
DDR1-278ENST00000515233 BRCA1P38398 1863 aaKnown RBP20.45■□□□□ 0.86
DDR1-278ENST00000515233 INTS5Q6P9B9 1019 aaKnown RBP20.44■□□□□ 0.86
DDR1-278ENST00000515233 LGR6Q9HBX8 967 aa20.44■□□□□ 0.86
DDR1-278ENST00000515233 TJP1Q07157 1748 aa20.44■□□□□ 0.86
DDR1-278ENST00000515233 PER1O15534 1290 aaPredicted RBP20.43■□□□□ 0.86
DDR1-278ENST00000515233 FCHSD2O94868 740 aa20.43■□□□□ 0.86
DDR1-278ENST00000515233 ARHGAP27Q6ZUM4 889 aa20.43■□□□□ 0.86
DDR1-278ENST00000515233 SRP68Q9UHB9 627 aaKnown RBP20.43■□□□□ 0.86
DDR1-278ENST00000515233 FKBP8Q14318 412 aa20.42■□□□□ 0.86
DDR1-278ENST00000515233 KIF7Q2M1P5 1343 aa20.42■□□□□ 0.86
DDR1-278ENST00000515233 RNMTO43148 476 aaKnown RBP20.41■□□□□ 0.86
DDR1-278ENST00000515233 TM4SF1P30408 202 aa20.41■□□□□ 0.86
DDR1-278ENST00000515233 PIM2Q9P1W9 311 aa20.41■□□□□ 0.86
DDR1-278ENST00000515233 ADAMTS7Q9UKP4 1686 aa20.41■□□□□ 0.86
DDR1-278ENST00000515233 DDR1Q08345 913 aa20.4■□□□□ 0.86
DDR1-278ENST00000515233 DNAJC10Q8IXB1 793 aa20.4■□□□□ 0.86
DDR1-278ENST00000515233 ARFGEF1Q9Y6D6 1849 aa20.4■□□□□ 0.86
DDR1-278ENST00000515233 MRC1P22897 1456 aa20.39■□□□□ 0.85
DDR1-278ENST00000515233 HMOX1P09601 288 aa20.39■□□□□ 0.85
DDR1-278ENST00000515233 POLRMTO00411 1230 aaKnown RBP20.38■□□□□ 0.85
DDR1-278ENST00000515233 ZPR1O75312 459 aa20.38■□□□□ 0.85
DDR1-278ENST00000515233 CYP19A1P11511 503 aaPredicted RBP20.38■□□□□ 0.85
DDR1-278ENST00000515233 MTHFSDQ2M296 383 aaKnown RBP20.38■□□□□ 0.85
DDR1-278ENST00000515233 VIRMAQ69YN4 1812 aaKnown RBP20.37■□□□□ 0.85
DDR1-278ENST00000515233 SOS1Q07889 1333 aaPredicted RBP20.37■□□□□ 0.85
DDR1-278ENST00000515233 DIAPH1O60610 1272 aaKnown RBP20.37■□□□□ 0.85
DDR1-278ENST00000515233 TOMM70O94826 608 aa20.37■□□□□ 0.85
DDR1-278ENST00000515233 SLC39A6Q13433 755 aa20.37■□□□□ 0.85
DDR1-278ENST00000515233 USPL1Q5W0Q7 1092 aa20.37■□□□□ 0.85
DDR1-278ENST00000515233 VSIG10Q8N0Z9 540 aa20.37■□□□□ 0.85
DDR1-278ENST00000515233 DALRD3Q5D0E6 543 aaKnown RBP20.36■□□□□ 0.85
DDR1-278ENST00000515233 NARFQ9UHQ1 456 aa20.35■□□□□ 0.85
DDR1-278ENST00000515233 KCPQ6ZWJ8 1503 aa20.34■□□□□ 0.85
DDR1-278ENST00000515233 C9orf131Q5VYM1 1079 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms