RNA–Protein interactions for RNA: ENST00000515143.5

SPOCK3-223, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 4

Gene SPOCK3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-223ENST00000515143 TMOD3Q9NYL9 352 aa9.87□□□□□ -0.83
SPOCK3-223ENST00000515143 ASAP1Q9ULH1 1129 aa9.87□□□□□ -0.83
SPOCK3-223ENST00000515143 ITGB4P16144 1822 aa9.86□□□□□ -0.83
SPOCK3-223ENST00000515143 SSFA2P28290 1259 aa9.86□□□□□ -0.83
SPOCK3-223ENST00000515143 TOGARAM1Q9Y4F4 1720 aa9.86□□□□□ -0.83
SPOCK3-223ENST00000515143 POLD1P28340 1107 aa9.85□□□□□ -0.83
SPOCK3-223ENST00000515143 SULT6B1Q6IMI4 303 aa9.85□□□□□ -0.83
SPOCK3-223ENST00000515143 SLC4A9Q96Q91 983 aa9.85□□□□□ -0.83
SPOCK3-223ENST00000515143 TAF1LQ8IZX4 1826 aa9.84□□□□□ -0.83
SPOCK3-223ENST00000515143 ITPK1Q13572 414 aa9.84□□□□□ -0.83
SPOCK3-223ENST00000515143 AKAP4Q5JQC9 854 aa9.84□□□□□ -0.83
SPOCK3-223ENST00000515143 AMIGO3Q86WK7 504 aa9.84□□□□□ -0.83
SPOCK3-223ENST00000515143 AEBP1Q8IUX7 1158 aa9.84□□□□□ -0.83
SPOCK3-223ENST00000515143 LINC00116Q8NCU8 138 aa9.84□□□□□ -0.83
SPOCK3-223ENST00000515143 CD2APQ9Y5K6 639 aa9.84□□□□□ -0.83
SPOCK3-223ENST00000515143 U3KPZ7 1027 aaPredicted RBP9.84□□□□□ -0.83
SPOCK3-223ENST00000515143 KDM6AO15550 1401 aaPredicted RBP9.83□□□□□ -0.84
SPOCK3-223ENST00000515143 ZNF530Q6P9A1 599 aaPredicted RBP9.83□□□□□ -0.84
SPOCK3-223ENST00000515143 CNTNAP4Q9C0A0 1308 aa9.82□□□□□ -0.84
SPOCK3-223ENST00000515143 C4BP0C0L5 1744 aa9.82□□□□□ -0.84
SPOCK3-223ENST00000515143 TUBGCP6Q96RT7 1819 aa9.82□□□□□ -0.84
SPOCK3-223ENST00000515143 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.82□□□□□ -0.84
SPOCK3-223ENST00000515143 DIAPH1O60610 1272 aaKnown RBP9.82□□□□□ -0.84
SPOCK3-223ENST00000515143 RPS6KA4O75676 772 aa9.82□□□□□ -0.84
SPOCK3-223ENST00000515143 YY1P25490 414 aa9.82□□□□□ -0.84
SPOCK3-223ENST00000515143 NFATC2IPQ8NCF5 419 aa9.82□□□□□ -0.84
SPOCK3-223ENST00000515143 C5P01031 1676 aa9.82□□□□□ -0.84
SPOCK3-223ENST00000515143 ATP6V1AP38606 617 aa9.81□□□□□ -0.84
SPOCK3-223ENST00000515143 CABP4P57796 275 aa9.81□□□□□ -0.84
SPOCK3-223ENST00000515143 C1orf141Q5JVX7 400 aa9.81□□□□□ -0.84
SPOCK3-223ENST00000515143 AK7Q96M32 723 aa9.81□□□□□ -0.84
SPOCK3-223ENST00000515143 COL3A1P02461 1466 aaPredicted RBP9.8□□□□□ -0.84
SPOCK3-223ENST00000515143 VSIG10Q8N0Z9 540 aa9.8□□□□□ -0.84
SPOCK3-223ENST00000515143 NLGN1Q8N2Q7 840 aa9.8□□□□□ -0.84
SPOCK3-223ENST00000515143 RNF39Q9H2S5 420 aa9.8□□□□□ -0.84
SPOCK3-223ENST00000515143 SLC52A2Q9HAB3 445 aa9.8□□□□□ -0.84
SPOCK3-223ENST00000515143 UBR3Q6ZT12 1888 aa9.8□□□□□ -0.84
SPOCK3-223ENST00000515143 ADAMTS7Q9UKP4 1686 aa9.8□□□□□ -0.84
SPOCK3-223ENST00000515143 CICQ96RK0 1608 aaPredicted RBP9.79□□□□□ -0.84
SPOCK3-223ENST00000515143 RNMTO43148 476 aaKnown RBP9.79□□□□□ -0.84
SPOCK3-223ENST00000515143 MTHFSDQ2M296 383 aaKnown RBP9.79□□□□□ -0.84
SPOCK3-223ENST00000515143 LGR6Q9HBX8 967 aa9.79□□□□□ -0.84
SPOCK3-223ENST00000515143 RTCBQ9Y3I0 505 aaKnown RBP9.79□□□□□ -0.84
SPOCK3-223ENST00000515143 GRIN3BO60391 1043 aa9.78□□□□□ -0.84
SPOCK3-223ENST00000515143 CC2D1BQ5T0F9 858 aaKnown RBP9.78□□□□□ -0.84
SPOCK3-223ENST00000515143 TRAPPC3LQ5T215 181 aa9.78□□□□□ -0.84
SPOCK3-223ENST00000515143 INTS5Q6P9B9 1019 aaKnown RBP9.78□□□□□ -0.84
SPOCK3-223ENST00000515143 NLGN2Q8NFZ4 835 aa9.78□□□□□ -0.84
SPOCK3-223ENST00000515143 ARHGEF1Q92888 912 aaKnown RBP9.78□□□□□ -0.84
SPOCK3-223ENST00000515143 MRC1P22897 1456 aa9.78□□□□□ -0.84
SPOCK3-223ENST00000515143 GNPATO15228 680 aa9.77□□□□□ -0.85
SPOCK3-223ENST00000515143 CEMIPQ8WUJ3 1361 aa9.76□□□□□ -0.85
SPOCK3-223ENST00000515143 SCN11AQ9UI33 1791 aa9.76□□□□□ -0.85
SPOCK3-223ENST00000515143 FCHSD2O94868 740 aa9.76□□□□□ -0.85
SPOCK3-223ENST00000515143 MYCNP04198 464 aaPredicted RBP9.76□□□□□ -0.85
SPOCK3-223ENST00000515143 CYP19A1P11511 503 aaPredicted RBP9.76□□□□□ -0.85
SPOCK3-223ENST00000515143 GYS1P13807 737 aa9.76□□□□□ -0.85
SPOCK3-223ENST00000515143 TGFB2P61812 414 aa9.76□□□□□ -0.85
SPOCK3-223ENST00000515143 IL17REQ8NFR9 667 aa9.76□□□□□ -0.85
SPOCK3-223ENST00000515143 GAS2L2Q8NHY3 880 aa9.76□□□□□ -0.85
SPOCK3-223ENST00000515143 RBM42Q9BTD8 480 aaKnown RBP9.76□□□□□ -0.85
SPOCK3-223ENST00000515143 GNAT3A8MTJ3 354 aa9.75□□□□□ -0.85
SPOCK3-223ENST00000515143 HTATSF1O43719 755 aaKnown RBP9.75□□□□□ -0.85
SPOCK3-223ENST00000515143 HMOX1P09601 288 aa9.75□□□□□ -0.85
SPOCK3-223ENST00000515143 YBX3P16989 372 aaKnown RBP eCLIP9.75□□□□□ -0.85
SPOCK3-223ENST00000515143 PPP2R1AP30153 589 aa9.75□□□□□ -0.85
SPOCK3-223ENST00000515143 TM4SF1P30408 202 aa9.75□□□□□ -0.85
SPOCK3-223ENST00000515143 CRKLP46109 303 aaKnown RBP9.75□□□□□ -0.85
SPOCK3-223ENST00000515143 GPR162Q16538 588 aa9.75□□□□□ -0.85
SPOCK3-223ENST00000515143 SMIM5Q71RC9 77 aa9.75□□□□□ -0.85
SPOCK3-223ENST00000515143 ZNF784Q8NCA9 323 aaPredicted RBP9.75□□□□□ -0.85
SPOCK3-223ENST00000515143 RSPH6AQ9H0K4 717 aa9.75□□□□□ -0.85
SPOCK3-223ENST00000515143 MYH14Q7Z406 1995 aaKnown RBP9.75□□□□□ -0.85
SPOCK3-223ENST00000515143 CEP350Q5VT06 3117 aa9.74□□□□□ -0.85
SPOCK3-223ENST00000515143 CHD4Q14839 1912 aa9.74□□□□□ -0.85
SPOCK3-223ENST00000515143 COL5A3P25940 1745 aaPredicted RBP9.74□□□□□ -0.85
SPOCK3-223ENST00000515143 PTCD1O75127 700 aaKnown RBP9.74□□□□□ -0.85
SPOCK3-223ENST00000515143 MSL1Q68DK7 614 aa9.74□□□□□ -0.85
SPOCK3-223ENST00000515143 CFAP53Q96M91 514 aa9.74□□□□□ -0.85
SPOCK3-223ENST00000515143 TEX13AQ9BXU3 409 aaPredicted RBP9.74□□□□□ -0.85
SPOCK3-223ENST00000515143 NUDCQ9Y266 331 aa9.74□□□□□ -0.85
SPOCK3-223ENST00000515143 PHF14O94880 888 aa9.73□□□□□ -0.85
SPOCK3-223ENST00000515143 MMP10P09238 476 aa9.73□□□□□ -0.85
SPOCK3-223ENST00000515143 RFC4P35249 363 aa9.73□□□□□ -0.85
SPOCK3-223ENST00000515143 PHACTR3Q96KR7 559 aa9.73□□□□□ -0.85
SPOCK3-223ENST00000515143 USP42Q9H9J4 1324 aaKnown RBP9.73□□□□□ -0.85
SPOCK3-223ENST00000515143 KCPQ6ZWJ8 1503 aa9.72□□□□□ -0.85
SPOCK3-223ENST00000515143 KCNA3P22001 575 aa9.72□□□□□ -0.85
SPOCK3-223ENST00000515143 ZNF790Q6PG37 636 aa9.72□□□□□ -0.85
SPOCK3-223ENST00000515143 DNAJC10Q8IXB1 793 aa9.72□□□□□ -0.85
SPOCK3-223ENST00000515143 CCDC87Q9NVE4 849 aa9.72□□□□□ -0.85
SPOCK3-223ENST00000515143 SOS1Q07889 1333 aaPredicted RBP9.72□□□□□ -0.85
SPOCK3-223ENST00000515143 KIF13BQ9NQT8 1826 aa9.72□□□□□ -0.85
SPOCK3-223ENST00000515143 RGL2O15211 777 aa9.71□□□□□ -0.86
SPOCK3-223ENST00000515143 EIF5P55010 431 aaKnown RBP9.71□□□□□ -0.86
SPOCK3-223ENST00000515143 SLC39A6Q13433 755 aa9.71□□□□□ -0.86
SPOCK3-223ENST00000515143 NARFQ9UHQ1 456 aa9.71□□□□□ -0.86
SPOCK3-223ENST00000515143 U2SURPO15042 1029 aaKnown RBP9.7□□□□□ -0.86
SPOCK3-223ENST00000515143 STARD3NLO95772 234 aa9.7□□□□□ -0.86
SPOCK3-223ENST00000515143 C10orf71Q711Q0 1435 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms