RNA–Protein interactions for RNA: ENST00000514967.5

PROM1-218, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-218ENST00000514967 HMGB2P26583 209 aaKnown RBP21.24■□□□□ 0.99
PROM1-218ENST00000514967 ACSBG1Q96GR2 724 aa21.24■□□□□ 0.99
PROM1-218ENST00000514967 ZNF521Q96K83 1311 aa21.24■□□□□ 0.99
PROM1-218ENST00000514967 TRIM37O94972 964 aa21.23■□□□□ 0.99
PROM1-218ENST00000514967 NEUROD2Q15784 382 aa21.23■□□□□ 0.99
PROM1-218ENST00000514967 RGPD3A6NKT7 1758 aaPredicted RBP21.23■□□□□ 0.99
PROM1-218ENST00000514967 RGPD4Q7Z3J3 1758 aa21.23■□□□□ 0.99
PROM1-218ENST00000514967 TNS1Q9HBL0 1735 aaKnown RBP21.22■□□□□ 0.99
PROM1-218ENST00000514967 ZNF853P0CG23 659 aa21.21■□□□□ 0.99
PROM1-218ENST00000514967 DCTN1Q14203 1278 aa21.21■□□□□ 0.99
PROM1-218ENST00000514967 UPF1Q92900 1129 aaKnown RBP eCLIP21.21■□□□□ 0.99
PROM1-218ENST00000514967 CFAP44Q96MT7 982 aa21.21■□□□□ 0.99
PROM1-218ENST00000514967 BTAF1O14981 1849 aa21.2■□□□□ 0.98
PROM1-218ENST00000514967 SYTL4Q96C24 671 aaPredicted RBP21.2■□□□□ 0.98
PROM1-218ENST00000514967 IFT57Q9NWB7 429 aa21.2■□□□□ 0.98
PROM1-218ENST00000514967 KAT6BQ8WYB5 2073 aa21.19■□□□□ 0.98
PROM1-218ENST00000514967 PAPPAQ13219 1627 aa21.19■□□□□ 0.98
PROM1-218ENST00000514967 ZNF831Q5JPB2 1677 aa21.19■□□□□ 0.98
PROM1-218ENST00000514967 CHL1O00533 1208 aa21.19■□□□□ 0.98
PROM1-218ENST00000514967 SF3B2Q13435 895 aaKnown RBP21.19■□□□□ 0.98
PROM1-218ENST00000514967 ATG3Q9NT62 314 aa21.19■□□□□ 0.98
PROM1-218ENST00000514967 GNAI1P63096 354 aa21.18■□□□□ 0.98
PROM1-218ENST00000514967 ZNF790Q6PG37 636 aa21.18■□□□□ 0.98
PROM1-218ENST00000514967 PTF1AQ7RTS3 328 aa21.18■□□□□ 0.98
PROM1-218ENST00000514967 BTBD11A6QL63 1104 aa21.17■□□□□ 0.98
PROM1-218ENST00000514967 VSIG10Q8N0Z9 540 aa21.17■□□□□ 0.98
PROM1-218ENST00000514967 APBA3O96018 575 aa21.16■□□□□ 0.98
PROM1-218ENST00000514967 BAG6P46379 1132 aa21.16■□□□□ 0.98
PROM1-218ENST00000514967 SLC27A3Q5K4L6 730 aa21.16■□□□□ 0.98
PROM1-218ENST00000514967 THUMPD2Q9BTF0 503 aaKnown RBP21.16■□□□□ 0.98
PROM1-218ENST00000514967 ASAP1Q9ULH1 1129 aa21.16■□□□□ 0.98
PROM1-218ENST00000514967 CICQ96RK0 1608 aaPredicted RBP21.15■□□□□ 0.98
PROM1-218ENST00000514967 PALLDQ8WX93 1383 aa21.15■□□□□ 0.98
PROM1-218ENST00000514967 UBR2Q8IWV8 1755 aa21.15■□□□□ 0.98
PROM1-218ENST00000514967 LY75O60449 1722 aa21.15■□□□□ 0.98
PROM1-218ENST00000514967 HEG1Q9ULI3 1381 aa21.14■□□□□ 0.98
PROM1-218ENST00000514967 CAMKK2Q96RR4 588 aa21.14■□□□□ 0.97
PROM1-218ENST00000514967 KDM3BQ7LBC6 1761 aa21.14■□□□□ 0.97
PROM1-218ENST00000514967 ZBED9Q6R2W3 1325 aa21.13■□□□□ 0.97
PROM1-218ENST00000514967 TTC5Q8N0Z6 440 aa21.13■□□□□ 0.97
PROM1-218ENST00000514967 SOS1Q07889 1333 aaPredicted RBP21.12■□□□□ 0.97
PROM1-218ENST00000514967 HNRNPUQ00839 825 aaKnown RBP eCLIP21.12■□□□□ 0.97
PROM1-218ENST00000514967 GOLGA2Q08379 1002 aa21.12■□□□□ 0.97
PROM1-218ENST00000514967 KCPQ6ZWJ8 1503 aa21.12■□□□□ 0.97
PROM1-218ENST00000514967 FMNL2Q96PY5 1086 aa21.11■□□□□ 0.97
PROM1-218ENST00000514967 TEX13AQ9BXU3 409 aaPredicted RBP21.11■□□□□ 0.97
PROM1-218ENST00000514967 TSPYL4Q9UJ04 414 aa21.11■□□□□ 0.97
PROM1-218ENST00000514967 LOC102724428A0A0B4J2F2 783 aa21.1■□□□□ 0.97
PROM1-218ENST00000514967 E9PSI1 815 aa21.1■□□□□ 0.97
PROM1-218ENST00000514967 SIK1P57059 783 aa21.1■□□□□ 0.97
PROM1-218ENST00000514967 EIF4A1P60842 406 aaKnown RBP21.1■□□□□ 0.97
PROM1-218ENST00000514967 PROM2Q8N271 834 aa21.1■□□□□ 0.97
PROM1-218ENST00000514967 HOXB7P09629 217 aa21.09■□□□□ 0.97
PROM1-218ENST00000514967 SLC39A6Q13433 755 aa21.09■□□□□ 0.97
PROM1-218ENST00000514967 TXNRD1Q16881 649 aa21.09■□□□□ 0.97
PROM1-218ENST00000514967 TRMT2AQ8IZ69 625 aaKnown RBP21.09■□□□□ 0.97
PROM1-218ENST00000514967 MYH16Q9H6N6 1097 aa21.09■□□□□ 0.97
PROM1-218ENST00000514967 SOCS7O14512 581 aa21.08■□□□□ 0.97
PROM1-218ENST00000514967 ZNF496Q96IT1 587 aaPredicted RBP21.08■□□□□ 0.97
PROM1-218ENST00000514967 MBIPQ9NS73 344 aa21.08■□□□□ 0.97
PROM1-218ENST00000514967 SLFN5Q08AF3 891 aa21.07■□□□□ 0.96
PROM1-218ENST00000514967 CHMP4AQ9BY43 222 aa21.07■□□□□ 0.96
PROM1-218ENST00000514967 SALL2Q9Y467 1007 aaPredicted RBP21.07■□□□□ 0.96
PROM1-218ENST00000514967 SNRPA1P09661 255 aaKnown RBP21.06■□□□□ 0.96
PROM1-218ENST00000514967 EN1Q05925 392 aaPredicted RBP21.06■□□□□ 0.96
PROM1-218ENST00000514967 SLC4A9Q96Q91 983 aa21.06■□□□□ 0.96
PROM1-218ENST00000514967 RREB1Q92766 1687 aa21.05■□□□□ 0.96
PROM1-218ENST00000514967 KCNQ3O43525 872 aa21.05■□□□□ 0.96
PROM1-218ENST00000514967 MIS18AQ9NYP9 233 aa21.05■□□□□ 0.96
PROM1-218ENST00000514967 CCNL1Q9UK58 526 aaPredicted RBP21.05■□□□□ 0.96
PROM1-218ENST00000514967 PTCD1O75127 700 aaKnown RBP21.04■□□□□ 0.96
PROM1-218ENST00000514967 GIGYF1O75420 1035 aaPredicted RBP21.04■□□□□ 0.96
PROM1-218ENST00000514967 RC3H1Q5TC82 1133 aaKnown RBP21.04■□□□□ 0.96
PROM1-218ENST00000514967 C5P01031 1676 aa21.03■□□□□ 0.96
PROM1-218ENST00000514967 ATP6V1AP38606 617 aa21.03■□□□□ 0.96
PROM1-218ENST00000514967 EZH2Q15910 746 aaKnown RBP21.03■□□□□ 0.96
PROM1-218ENST00000514967 DEFB132Q7Z7B7 95 aa21.03■□□□□ 0.96
PROM1-218ENST00000514967 RBM42Q9BTD8 480 aaKnown RBP21.03■□□□□ 0.96
PROM1-218ENST00000514967 SPINK5Q9NQ38 1064 aaPredicted RBP21.03■□□□□ 0.96
PROM1-218ENST00000514967 LRRC4BQ9NT99 713 aa21.03■□□□□ 0.96
PROM1-218ENST00000514967 LAS1LQ9Y4W2 734 aaKnown RBP21.03■□□□□ 0.96
PROM1-218ENST00000514967 FANCIQ9NVI1 1328 aa21.03■□□□□ 0.96
PROM1-218ENST00000514967 STARD3NLO95772 234 aa21.01■□□□□ 0.95
PROM1-218ENST00000514967 CNTNAP4Q9C0A0 1308 aa21.01■□□□□ 0.95
PROM1-218ENST00000514967 TAF1LQ8IZX4 1826 aa21■□□□□ 0.95
PROM1-218ENST00000514967 SENP3-EIF4A1A0A087X0R7 540 aa21■□□□□ 0.95
PROM1-218ENST00000514967 CT47B1P0C2W7 299 aaPredicted RBP21■□□□□ 0.95
PROM1-218ENST00000514967 ITPK1Q13572 414 aa21■□□□□ 0.95
PROM1-218ENST00000514967 COL5A3P25940 1745 aaPredicted RBP21■□□□□ 0.95
PROM1-218ENST00000514967 TJP1Q07157 1748 aa21■□□□□ 0.95
PROM1-218ENST00000514967 ERBB4Q15303 1308 aa21■□□□□ 0.95
PROM1-218ENST00000514967 CYP19A1P11511 503 aaPredicted RBP20.99■□□□□ 0.95
PROM1-218ENST00000514967 DUSP27Q5VZP5 1158 aa20.99■□□□□ 0.95
PROM1-218ENST00000514967 DNAJC10Q8IXB1 793 aa20.98■□□□□ 0.95
PROM1-218ENST00000514967 TSR2Q969E8 191 aaKnown RBP20.98■□□□□ 0.95
PROM1-218ENST00000514967 ZNF428Q96B54 188 aa20.98■□□□□ 0.95
PROM1-218ENST00000514967 CDCA7LQ96GN5 454 aa20.97■□□□□ 0.95
PROM1-218ENST00000514967 NUP188Q5SRE5 1749 aa20.97■□□□□ 0.95
PROM1-218ENST00000514967 LAMB4A4D0S4 1761 aa20.96■□□□□ 0.95
PROM1-218ENST00000514967 LINC00116Q8NCU8 138 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms