RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 SYT17Q9BSW7 474 aa19.96■□□□□ 0.79
SGCA-211ENST00000514934 FHDC1Q9C0D6 1143 aaPredicted RBP19.96■□□□□ 0.79
SGCA-211ENST00000514934 TMOD3Q9NYL9 352 aa19.96■□□□□ 0.79
SGCA-211ENST00000514934 LOC102724428A0A0B4J2F2 783 aa19.95■□□□□ 0.78
SGCA-211ENST00000514934 ERVV-2B6SEH9 535 aa19.95■□□□□ 0.78
SGCA-211ENST00000514934 SIK1P57059 783 aa19.95■□□□□ 0.78
SGCA-211ENST00000514934 AMOTQ4VCS5 1084 aa19.95■□□□□ 0.78
SGCA-211ENST00000514934 PLEKHO1Q53GL0 409 aaPredicted RBP19.95■□□□□ 0.78
SGCA-211ENST00000514934 ZNF530Q6P9A1 599 aaPredicted RBP19.95■□□□□ 0.78
SGCA-211ENST00000514934 DCAF5Q96JK2 942 aa19.95■□□□□ 0.78
SGCA-211ENST00000514934 YY1P25490 414 aa19.94■□□□□ 0.78
SGCA-211ENST00000514934 ARXQ96QS3 562 aa19.94■□□□□ 0.78
SGCA-211ENST00000514934 KIF13BQ9NQT8 1826 aa19.93■□□□□ 0.78
SGCA-211ENST00000514934 KIAA1551Q9HCM1 1747 aa19.93■□□□□ 0.78
SGCA-211ENST00000514934 SMIM5Q71RC9 77 aa19.92■□□□□ 0.78
SGCA-211ENST00000514934 HSP90AB1P08238 724 aaKnown RBP19.9■□□□□ 0.78
SGCA-211ENST00000514934 KCPQ6ZWJ8 1503 aa19.9■□□□□ 0.78
SGCA-211ENST00000514934 HMOX1P09601 288 aa19.89■□□□□ 0.77
SGCA-211ENST00000514934 DIAPH1O60610 1272 aaKnown RBP19.88■□□□□ 0.77
SGCA-211ENST00000514934 DLG5Q8TDM6 1919 aa19.87■□□□□ 0.77
SGCA-211ENST00000514934 MTHFSDQ2M296 383 aaKnown RBP19.86■□□□□ 0.77
SGCA-211ENST00000514934 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.85■□□□□ 0.77
SGCA-211ENST00000514934 ATP6V1AP38606 617 aa19.85■□□□□ 0.77
SGCA-211ENST00000514934 AKAP4Q5JQC9 854 aa19.85■□□□□ 0.77
SGCA-211ENST00000514934 MSL1Q68DK7 614 aa19.85■□□□□ 0.77
SGCA-211ENST00000514934 LGR6Q9HBX8 967 aa19.85■□□□□ 0.77
SGCA-211ENST00000514934 BRCA1P38398 1863 aaKnown RBP19.85■□□□□ 0.77
SGCA-211ENST00000514934 SSFA2P28290 1259 aa19.84■□□□□ 0.77
SGCA-211ENST00000514934 CABP4P57796 275 aa19.84■□□□□ 0.77
SGCA-211ENST00000514934 C1orf141Q5JVX7 400 aa19.84■□□□□ 0.77
SGCA-211ENST00000514934 NFATC2IPQ8NCF5 419 aa19.84■□□□□ 0.77
SGCA-211ENST00000514934 FLAD1Q8NFF5 587 aa19.84■□□□□ 0.77
SGCA-211ENST00000514934 NLGN2Q8NFZ4 835 aa19.84■□□□□ 0.77
SGCA-211ENST00000514934 AK7Q96M32 723 aa19.84■□□□□ 0.77
SGCA-211ENST00000514934 CNTNAP4Q9C0A0 1308 aa19.83■□□□□ 0.77
SGCA-211ENST00000514934 HMGB2P26583 209 aaKnown RBP19.83■□□□□ 0.77
SGCA-211ENST00000514934 POLD1P28340 1107 aa19.82■□□□□ 0.76
SGCA-211ENST00000514934 PPP2R1AP30153 589 aa19.82■□□□□ 0.76
SGCA-211ENST00000514934 GNPATO15228 680 aa19.81■□□□□ 0.76
SGCA-211ENST00000514934 RNMTO43148 476 aaKnown RBP19.81■□□□□ 0.76
SGCA-211ENST00000514934 RC3H1Q5TC82 1133 aaKnown RBP19.81■□□□□ 0.76
SGCA-211ENST00000514934 SLC52A2Q9HAB3 445 aa19.81■□□□□ 0.76
SGCA-211ENST00000514934 CNGB1Q14028 1251 aaPredicted RBP19.8■□□□□ 0.76
SGCA-211ENST00000514934 N4BP2Q86UW6 1770 aaPredicted RBP19.8■□□□□ 0.76
SGCA-211ENST00000514934 PHF14O94880 888 aa19.79■□□□□ 0.76
SGCA-211ENST00000514934 RSPH6AQ9H0K4 717 aa19.79■□□□□ 0.76
SGCA-211ENST00000514934 MSH5O43196 834 aa19.78■□□□□ 0.76
SGCA-211ENST00000514934 RBM42Q9BTD8 480 aaKnown RBP19.78■□□□□ 0.76
SGCA-211ENST00000514934 AFDNP55196 1824 aaKnown RBP19.78■□□□□ 0.76
SGCA-211ENST00000514934 PHACTR3Q96KR7 559 aa19.77■□□□□ 0.76
SGCA-211ENST00000514934 CEMIPQ8WUJ3 1361 aa19.77■□□□□ 0.76
SGCA-211ENST00000514934 PTCD1O75127 700 aaKnown RBP19.76■□□□□ 0.75
SGCA-211ENST00000514934 IL17REQ8NFR9 667 aa19.76■□□□□ 0.75
SGCA-211ENST00000514934 RPS6KA4O75676 772 aa19.75■□□□□ 0.75
SGCA-211ENST00000514934 INTS5Q6P9B9 1019 aaKnown RBP19.75■□□□□ 0.75
SGCA-211ENST00000514934 NRXN2Q9P2S2 1712 aa19.75■□□□□ 0.75
SGCA-211ENST00000514934 U2SURPO15042 1029 aaKnown RBP19.74■□□□□ 0.75
SGCA-211ENST00000514934 CRKLP46109 303 aaKnown RBP19.74■□□□□ 0.75
SGCA-211ENST00000514934 SLC39A6Q13433 755 aa19.74■□□□□ 0.75
SGCA-211ENST00000514934 ARHGEF1Q92888 912 aaKnown RBP19.74■□□□□ 0.75
SGCA-211ENST00000514934 YBX3P16989 372 aaKnown RBP eCLIP19.73■□□□□ 0.75
SGCA-211ENST00000514934 ADRA2BP18089 450 aa19.73■□□□□ 0.75
SGCA-211ENST00000514934 CD2APQ9Y5K6 639 aa19.73■□□□□ 0.75
SGCA-211ENST00000514934 GYS1P13807 737 aa19.72■□□□□ 0.75
SGCA-211ENST00000514934 PRKAR2BP31323 418 aa19.72■□□□□ 0.75
SGCA-211ENST00000514934 DNAJC10Q8IXB1 793 aa19.72■□□□□ 0.75
SGCA-211ENST00000514934 RTCBQ9Y3I0 505 aaKnown RBP19.72■□□□□ 0.75
SGCA-211ENST00000514934 KDM3BQ7LBC6 1761 aa19.72■□□□□ 0.75
SGCA-211ENST00000514934 SCN7AQ01118 1682 aa19.71■□□□□ 0.75
SGCA-211ENST00000514934 C10orf71Q711Q0 1435 aa19.71■□□□□ 0.75
SGCA-211ENST00000514934 KLHL34Q8N239 644 aa19.71■□□□□ 0.75
SGCA-211ENST00000514934 ARFGEF1Q9Y6D6 1849 aa19.71■□□□□ 0.75
SGCA-211ENST00000514934 CYP19A1P11511 503 aaPredicted RBP19.7■□□□□ 0.74
SGCA-211ENST00000514934 TRAPPC3LQ5T215 181 aa19.7■□□□□ 0.74
SGCA-211ENST00000514934 BCORQ6W2J9 1755 aa19.7■□□□□ 0.74
SGCA-211ENST00000514934 PXDNLA1KZ92 1463 aa19.69■□□□□ 0.74
SGCA-211ENST00000514934 GNAT3A8MTJ3 354 aa19.69■□□□□ 0.74
SGCA-211ENST00000514934 GAS2L2Q8NHY3 880 aa19.69■□□□□ 0.74
SGCA-211ENST00000514934 CFAP53Q96M91 514 aa19.69■□□□□ 0.74
SGCA-211ENST00000514934 DLEC1Q9Y238 1755 aa19.69■□□□□ 0.74
SGCA-211ENST00000514934 SOS1Q07889 1333 aaPredicted RBP19.69■□□□□ 0.74
SGCA-211ENST00000514934 DCAF8L1A6NGE4 600 aa19.68■□□□□ 0.74
SGCA-211ENST00000514934 MMP10P09238 476 aa19.68■□□□□ 0.74
SGCA-211ENST00000514934 USP42Q9H9J4 1324 aaKnown RBP19.68■□□□□ 0.74
SGCA-211ENST00000514934 LAMB4A4D0S4 1761 aa19.67■□□□□ 0.74
SGCA-211ENST00000514934 VSIG10Q8N0Z9 540 aa19.67■□□□□ 0.74
SGCA-211ENST00000514934 SRP68Q9UHB9 627 aaKnown RBP19.67■□□□□ 0.74
SGCA-211ENST00000514934 FCHSD2O94868 740 aa19.66■□□□□ 0.74
SGCA-211ENST00000514934 ZNF784Q8NCA9 323 aaPredicted RBP19.66■□□□□ 0.74
SGCA-211ENST00000514934 CCDC87Q9NVE4 849 aa19.66■□□□□ 0.74
SGCA-211ENST00000514934 ANKRD31Q8N7Z5 1873 aa19.66■□□□□ 0.74
SGCA-211ENST00000514934 GPR162Q16538 588 aa19.65■□□□□ 0.74
SGCA-211ENST00000514934 ZNF496Q96IT1 587 aaPredicted RBP19.65■□□□□ 0.74
SGCA-211ENST00000514934 ZBTB1Q9Y2K1 713 aa19.65■□□□□ 0.74
SGCA-211ENST00000514934 HEG1Q9ULI3 1381 aa19.65■□□□□ 0.74
SGCA-211ENST00000514934 U2AF1L5P0DN76 240 aaPredicted RBP19.64■□□□□ 0.73
SGCA-211ENST00000514934 U2AF1Q01081 240 aaKnown RBP eCLIP19.64■□□□□ 0.73
SGCA-211ENST00000514934 DDR1Q08345 913 aa19.64■□□□□ 0.73
SGCA-211ENST00000514934 ZNF790Q6PG37 636 aa19.64■□□□□ 0.73
SGCA-211ENST00000514934 NLGN1Q8N2Q7 840 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms