RNA–Protein interactions for RNA: ENST00000514494.1

PPARGC1A-213, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 4

Gene PPARGC1A, Length 529 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-213ENST00000514494 WDR44Q5JSH3 913 aa10.68□□□□□ -0.7
PPARGC1A-213ENST00000514494 UCN2Q96RP3 112 aa10.68□□□□□ -0.7
PPARGC1A-213ENST00000514494 FHDC1Q9C0D6 1143 aaPredicted RBP10.68□□□□□ -0.7
PPARGC1A-213ENST00000514494 HRH3Q9Y5N1 445 aa10.68□□□□□ -0.7
PPARGC1A-213ENST00000514494 USP17L3A6NCW0 530 aa10.67□□□□□ -0.7
PPARGC1A-213ENST00000514494 USP17L4A6NCW7 530 aa10.67□□□□□ -0.7
PPARGC1A-213ENST00000514494 ATP9BO43861 1147 aa10.67□□□□□ -0.7
PPARGC1A-213ENST00000514494 USP17L2Q6R6M4 530 aa10.67□□□□□ -0.7
PPARGC1A-213ENST00000514494 USP17L1Q7RTZ2 530 aa10.67□□□□□ -0.7
PPARGC1A-213ENST00000514494 TRIM50Q86XT4 487 aa10.67□□□□□ -0.7
PPARGC1A-213ENST00000514494 GPR161Q8N6U8 529 aaKnown RBP10.67□□□□□ -0.7
PPARGC1A-213ENST00000514494 H7C1W4 665 aa10.66□□□□□ -0.7
PPARGC1A-213ENST00000514494 CNTNAP3BQ96NU0 1288 aa10.66□□□□□ -0.7
PPARGC1A-213ENST00000514494 COL25A1Q9BXS0 654 aaPredicted RBP10.66□□□□□ -0.7
PPARGC1A-213ENST00000514494 CNTNAP3Q9BZ76 1288 aa10.66□□□□□ -0.7
PPARGC1A-213ENST00000514494 CUEDC1Q9NWM3 386 aaPredicted RBP10.66□□□□□ -0.7
PPARGC1A-213ENST00000514494 PCDHGA11Q9Y5H2 935 aa10.66□□□□□ -0.7
PPARGC1A-213ENST00000514494 C4orf17Q53FE4 359 aa10.65□□□□□ -0.7
PPARGC1A-213ENST00000514494 PLEKHM2Q8IWE5 1019 aa10.65□□□□□ -0.7
PPARGC1A-213ENST00000514494 ZSCAN1Q8NBB4 408 aa10.65□□□□□ -0.7
PPARGC1A-213ENST00000514494 RHBDD1Q8TEB9 315 aa10.65□□□□□ -0.7
PPARGC1A-213ENST00000514494 GPAMQ9HCL2 828 aa10.65□□□□□ -0.7
PPARGC1A-213ENST00000514494 BACH1O14867 736 aa10.64□□□□□ -0.71
PPARGC1A-213ENST00000514494 F11P03951 625 aa10.64□□□□□ -0.71
PPARGC1A-213ENST00000514494 ATP1A2P50993 1020 aa10.64□□□□□ -0.71
PPARGC1A-213ENST00000514494 SMTNP53814 917 aa10.64□□□□□ -0.71
PPARGC1A-213ENST00000514494 FOXR1Q6PIV2 292 aa10.64□□□□□ -0.71
PPARGC1A-213ENST00000514494 PPARGC1BQ86YN6 1023 aaKnown RBP10.64□□□□□ -0.71
PPARGC1A-213ENST00000514494 TRIM22Q8IYM9 498 aa10.64□□□□□ -0.71
PPARGC1A-213ENST00000514494 A0A1B0GTH6 734 aa10.63□□□□□ -0.71
PPARGC1A-213ENST00000514494 TMEM229AB2RXF0 380 aa10.63□□□□□ -0.71
PPARGC1A-213ENST00000514494 PLA2G4AP47712 749 aa10.63□□□□□ -0.71
PPARGC1A-213ENST00000514494 ZNF837Q96EG3 531 aaPredicted RBP10.63□□□□□ -0.71
PPARGC1A-213ENST00000514494 GMCL1Q96IK5 515 aa10.63□□□□□ -0.71
PPARGC1A-213ENST00000514494 TFIP11Q9UBB9 837 aaKnown RBP10.63□□□□□ -0.71
PPARGC1A-213ENST00000514494 STK17AQ9UEE5 414 aa10.62□□□□□ -0.71
PPARGC1A-213ENST00000514494 FAM181BA6NEQ2 426 aa10.61□□□□□ -0.71
PPARGC1A-213ENST00000514494 CSB-PGBD3P0DP91 1061 aa10.61□□□□□ -0.71
PPARGC1A-213ENST00000514494 DBN1Q16643 649 aa10.61□□□□□ -0.71
PPARGC1A-213ENST00000514494 PGBD3Q8N328 593 aa10.61□□□□□ -0.71
PPARGC1A-213ENST00000514494 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.61□□□□□ -0.71
PPARGC1A-213ENST00000514494 NIFKQ9BYG3 293 aaKnown RBP10.61□□□□□ -0.71
PPARGC1A-213ENST00000514494 NUCKS1Q9H1E3 243 aaKnown RBP10.61□□□□□ -0.71
PPARGC1A-213ENST00000514494 MKRN1Q9UHC7 482 aaKnown RBP10.61□□□□□ -0.71
PPARGC1A-213ENST00000514494 ZNF777Q9ULD5 760 aaPredicted RBP10.61□□□□□ -0.71
PPARGC1A-213ENST00000514494 A6NJY4 79 aa10.6□□□□□ -0.71
PPARGC1A-213ENST00000514494 GPR25O00155 361 aa10.6□□□□□ -0.71
PPARGC1A-213ENST00000514494 KRT76Q01546 638 aa10.6□□□□□ -0.71
PPARGC1A-213ENST00000514494 TPCN2Q8NHX9 752 aa10.6□□□□□ -0.71
PPARGC1A-213ENST00000514494 GTPBP3Q969Y2 492 aaKnown RBP10.6□□□□□ -0.71
PPARGC1A-213ENST00000514494 TRERF1Q96PN7 1200 aa10.6□□□□□ -0.71
PPARGC1A-213ENST00000514494 DNAAF2Q9NVR5 837 aaKnown RBP10.6□□□□□ -0.71
PPARGC1A-213ENST00000514494 RBM19Q9Y4C8 960 aaKnown RBP10.6□□□□□ -0.71
PPARGC1A-213ENST00000514494 RNFT1Q5M7Z0 435 aa10.59□□□□□ -0.71
PPARGC1A-213ENST00000514494 OGFOD1Q8N543 542 aa10.59□□□□□ -0.71
PPARGC1A-213ENST00000514494 AIDAQ96BJ3 306 aa10.59□□□□□ -0.71
PPARGC1A-213ENST00000514494 SLC4A9Q96Q91 983 aa10.59□□□□□ -0.71
PPARGC1A-213ENST00000514494 ZNF358Q9NW07 568 aa10.59□□□□□ -0.71
PPARGC1A-213ENST00000514494 MAFBQ9Y5Q3 323 aaPredicted RBP10.59□□□□□ -0.71
PPARGC1A-213ENST00000514494 PALM3A6NDB9 673 aaPredicted RBP10.58□□□□□ -0.72
PPARGC1A-213ENST00000514494 CCDC102BQ68D86 513 aa10.58□□□□□ -0.72
PPARGC1A-213ENST00000514494 CABP1Q9NZU7 370 aa10.58□□□□□ -0.72
PPARGC1A-213ENST00000514494 CDK2AP1O14519 115 aa10.57□□□□□ -0.72
PPARGC1A-213ENST00000514494 MSX1P28360 303 aa10.57□□□□□ -0.72
PPARGC1A-213ENST00000514494 CLDN10P78369 228 aa10.57□□□□□ -0.72
PPARGC1A-213ENST00000514494 ZNF594Q96JF6 807 aaPredicted RBP10.57□□□□□ -0.72
PPARGC1A-213ENST00000514494 PPP1R12CQ9BZL4 782 aa10.57□□□□□ -0.72
PPARGC1A-213ENST00000514494 RUBCNLQ9H714 662 aa10.57□□□□□ -0.72
PPARGC1A-213ENST00000514494 KIAA1024Q9UPX6 916 aa10.57□□□□□ -0.72
PPARGC1A-213ENST00000514494 GTF3C3Q9Y5Q9 886 aa10.57□□□□□ -0.72
PPARGC1A-213ENST00000514494 RASA1P20936 1047 aa10.56□□□□□ -0.72
PPARGC1A-213ENST00000514494 MTFR1Q15390 333 aa10.56□□□□□ -0.72
PPARGC1A-213ENST00000514494 EFHC2Q5JST6 749 aa10.56□□□□□ -0.72
PPARGC1A-213ENST00000514494 NBPF1Q3BBV0 1214 aa10.55□□□□□ -0.72
PPARGC1A-213ENST00000514494 LARGE2Q8N3Y3 721 aa10.55□□□□□ -0.72
PPARGC1A-213ENST00000514494 ZBTB7BO15156 539 aaPredicted RBP10.54□□□□□ -0.72
PPARGC1A-213ENST00000514494 LARP1Q6PKG0 1096 aaKnown RBP10.54□□□□□ -0.72
PPARGC1A-213ENST00000514494 USP3Q9Y6I4 520 aa10.54□□□□□ -0.72
PPARGC1A-213ENST00000514494 LORP23490 312 aaPredicted RBP10.53□□□□□ -0.72
PPARGC1A-213ENST00000514494 LMOD1P29536 600 aaPredicted RBP10.53□□□□□ -0.72
PPARGC1A-213ENST00000514494 TNS4Q8IZW8 715 aa10.53□□□□□ -0.72
PPARGC1A-213ENST00000514494 SCHIP1Q9P0W5 487 aaPredicted RBP10.53□□□□□ -0.72
PPARGC1A-213ENST00000514494 TATP17735 454 aaPredicted RBP10.52□□□□□ -0.73
PPARGC1A-213ENST00000514494 GAS6Q14393 721 aa10.52□□□□□ -0.73
PPARGC1A-213ENST00000514494 LBRQ14739 615 aaKnown RBP10.52□□□□□ -0.73
PPARGC1A-213ENST00000514494 ARSJQ5FYB0 599 aaPredicted RBP10.52□□□□□ -0.73
PPARGC1A-213ENST00000514494 TBCELQ5QJ74 424 aa10.52□□□□□ -0.73
PPARGC1A-213ENST00000514494 SLC9A9Q8IVB4 645 aa10.52□□□□□ -0.73
PPARGC1A-213ENST00000514494 SVOPQ8N4V2 548 aa10.52□□□□□ -0.73
PPARGC1A-213ENST00000514494 C1orf216Q8TAB5 229 aa10.52□□□□□ -0.73
PPARGC1A-213ENST00000514494 MBIPQ9NS73 344 aa10.52□□□□□ -0.73
PPARGC1A-213ENST00000514494 IQSEC3Q9UPP2 1182 aaPredicted RBP10.52□□□□□ -0.73
PPARGC1A-213ENST00000514494 PHF24Q9UPV7 400 aa10.52□□□□□ -0.73
PPARGC1A-213ENST00000514494 PARP3Q9Y6F1 533 aa10.52□□□□□ -0.73
PPARGC1A-213ENST00000514494 ADAMTS2O95450 1211 aa10.51□□□□□ -0.73
PPARGC1A-213ENST00000514494 ZMYND15Q9H091 742 aa10.51□□□□□ -0.73
PPARGC1A-213ENST00000514494 ZNF232Q9UNY5 417 aa10.51□□□□□ -0.73
PPARGC1A-213ENST00000514494 SFI1A8K8P3 1242 aa10.5□□□□□ -0.73
PPARGC1A-213ENST00000514494 MX2P20592 715 aa10.5□□□□□ -0.73
PPARGC1A-213ENST00000514494 SRSF11Q05519 484 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms