RNA–Protein interactions for RNA: ENST00000514478.1

COPG1-209, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-209ENST00000514478 SMC4Q9NTJ3 1288 aa11.43□□□□□ -0.58
COPG1-209ENST00000514478 ADAMTS7Q9UKP4 1686 aa11.43□□□□□ -0.58
COPG1-209ENST00000514478 ELL2O00472 640 aaPredicted RBP11.42□□□□□ -0.58
COPG1-209ENST00000514478 CHL1O00533 1208 aa11.42□□□□□ -0.58
COPG1-209ENST00000514478 TAF7Q15545 349 aaPredicted RBP11.42□□□□□ -0.58
COPG1-209ENST00000514478 TWISTNBQ3B726 338 aaPredicted RBP11.42□□□□□ -0.58
COPG1-209ENST00000514478 MPRIPQ6WCQ1 1025 aa11.42□□□□□ -0.58
COPG1-209ENST00000514478 IL17REQ8NFR9 667 aa11.42□□□□□ -0.58
COPG1-209ENST00000514478 PPP4R2Q9NY27 417 aa11.42□□□□□ -0.58
COPG1-209ENST00000514478 MIS18AQ9NYP9 233 aa11.42□□□□□ -0.58
COPG1-209ENST00000514478 USP35Q9P2H5 1018 aa11.42□□□□□ -0.58
COPG1-209ENST00000514478 PLEKHG2Q9H7P9 1386 aa11.41□□□□□ -0.58
COPG1-209ENST00000514478 PSDA5PKW4 1024 aaPredicted RBP11.41□□□□□ -0.58
COPG1-209ENST00000514478 RNMTO43148 476 aaKnown RBP11.41□□□□□ -0.58
COPG1-209ENST00000514478 IL2RBP14784 551 aa11.41□□□□□ -0.58
COPG1-209ENST00000514478 IFNL2Q8IZJ0 200 aa11.41□□□□□ -0.58
COPG1-209ENST00000514478 LGR6Q9HBX8 967 aa11.41□□□□□ -0.58
COPG1-209ENST00000514478 PPP1R1BQ9UD71 204 aaPredicted RBP11.41□□□□□ -0.58
COPG1-209ENST00000514478 OVOS2A0A0G2JMS6 1433 aa11.41□□□□□ -0.58
COPG1-209ENST00000514478 TNS1Q9HBL0 1735 aaKnown RBP11.4□□□□□ -0.58
COPG1-209ENST00000514478 ITGB4P16144 1822 aa11.4□□□□□ -0.58
COPG1-209ENST00000514478 FAM98CQ17RN3 349 aaKnown RBP11.4□□□□□ -0.58
COPG1-209ENST00000514478 ALDH1L2Q3SY69 923 aa11.4□□□□□ -0.58
COPG1-209ENST00000514478 FAM196AQ6ZSG2 479 aa11.4□□□□□ -0.58
COPG1-209ENST00000514478 C8orf58Q8NAV2 365 aa11.4□□□□□ -0.58
COPG1-209ENST00000514478 EXOC6Q8TAG9 804 aa11.4□□□□□ -0.58
COPG1-209ENST00000514478 ZNF428Q96B54 188 aa11.4□□□□□ -0.58
COPG1-209ENST00000514478 CRBNQ96SW2 442 aa11.4□□□□□ -0.58
COPG1-209ENST00000514478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.4□□□□□ -0.58
COPG1-209ENST00000514478 DAXXQ9UER7 740 aaPredicted RBP11.4□□□□□ -0.58
COPG1-209ENST00000514478 VAMP4O75379 141 aa11.39□□□□□ -0.59
COPG1-209ENST00000514478 HSP90AB1P08238 724 aaKnown RBP11.39□□□□□ -0.59
COPG1-209ENST00000514478 PHKG2P15735 406 aa11.39□□□□□ -0.59
COPG1-209ENST00000514478 ZKSCAN2Q63HK3 967 aa11.39□□□□□ -0.59
COPG1-209ENST00000514478 TSPYL6Q8N831 410 aa11.39□□□□□ -0.59
COPG1-209ENST00000514478 ZCRB1Q8TBF4 217 aaKnown RBP11.39□□□□□ -0.59
COPG1-209ENST00000514478 SSH1Q8WYL5 1049 aa11.39□□□□□ -0.59
COPG1-209ENST00000514478 BABAM1Q9NWV8 329 aa11.39□□□□□ -0.59
COPG1-209ENST00000514478 KIF16BQ96L93 1317 aa11.38□□□□□ -0.59
COPG1-209ENST00000514478 PCDH11XQ9BZA7 1347 aa11.38□□□□□ -0.59
COPG1-209ENST00000514478 PCDH11YQ9BZA8 1340 aa11.38□□□□□ -0.59
COPG1-209ENST00000514478 DISP2A7MBM2 1401 aa11.38□□□□□ -0.59
COPG1-209ENST00000514478 BTBD11A6QL63 1104 aa11.38□□□□□ -0.59
COPG1-209ENST00000514478 MS4A1P11836 297 aa11.38□□□□□ -0.59
COPG1-209ENST00000514478 C20orf194Q5TEA3 1177 aa11.38□□□□□ -0.59
COPG1-209ENST00000514478 CEMIPQ8WUJ3 1361 aa11.38□□□□□ -0.59
COPG1-209ENST00000514478 TCERG1O14776 1098 aaKnown RBP11.37□□□□□ -0.59
COPG1-209ENST00000514478 IPO8O15397 1037 aaKnown RBP11.37□□□□□ -0.59
COPG1-209ENST00000514478 YY1P25490 414 aa11.37□□□□□ -0.59
COPG1-209ENST00000514478 EN1Q05925 392 aaPredicted RBP11.37□□□□□ -0.59
COPG1-209ENST00000514478 KRT24Q2M2I5 525 aa11.37□□□□□ -0.59
COPG1-209ENST00000514478 FTSJ3Q8IY81 847 aaKnown RBP11.37□□□□□ -0.59
COPG1-209ENST00000514478 CCDC136Q96JN2 1154 aa11.37□□□□□ -0.59
COPG1-209ENST00000514478 C5P01031 1676 aa11.36□□□□□ -0.59
COPG1-209ENST00000514478 KDM6AO15550 1401 aaPredicted RBP11.36□□□□□ -0.59
COPG1-209ENST00000514478 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
COPG1-209ENST00000514478 PDE3AQ14432 1141 aa11.36□□□□□ -0.59
COPG1-209ENST00000514478 R3HDM1Q15032 1099 aaKnown RBP11.36□□□□□ -0.59
COPG1-209ENST00000514478 B4GALNT3Q6L9W6 998 aa11.36□□□□□ -0.59
COPG1-209ENST00000514478 DDX54Q8TDD1 881 aaKnown RBP11.36□□□□□ -0.59
COPG1-209ENST00000514478 DCAF5Q96JK2 942 aa11.36□□□□□ -0.59
COPG1-209ENST00000514478 NOB1Q9ULX3 412 aaKnown RBP11.36□□□□□ -0.59
COPG1-209ENST00000514478 DOT1LQ8TEK3 1739 aa11.35□□□□□ -0.59
COPG1-209ENST00000514478 CYP27B1O15528 508 aa11.35□□□□□ -0.59
COPG1-209ENST00000514478 PELP1Q8IZL8 1130 aaKnown RBP11.35□□□□□ -0.59
COPG1-209ENST00000514478 MRPL50Q8N5N7 158 aaKnown RBP11.35□□□□□ -0.59
COPG1-209ENST00000514478 PANK1Q8TE04 598 aa11.35□□□□□ -0.59
COPG1-209ENST00000514478 CLUAP1Q96AJ1 413 aa11.35□□□□□ -0.59
COPG1-209ENST00000514478 THSD7AQ9UPZ6 1657 aa11.35□□□□□ -0.59
COPG1-209ENST00000514478 LAMB4A4D0S4 1761 aa11.35□□□□□ -0.59
COPG1-209ENST00000514478 SPATA31A5Q5VU36 1347 aa11.35□□□□□ -0.59
COPG1-209ENST00000514478 SPATA31A7Q8IWB4 1347 aa11.35□□□□□ -0.59
COPG1-209ENST00000514478 RREB1Q92766 1687 aa11.34□□□□□ -0.59
COPG1-209ENST00000514478 MRC1P22897 1456 aa11.34□□□□□ -0.59
COPG1-209ENST00000514478 APBA3O96018 575 aa11.34□□□□□ -0.59
COPG1-209ENST00000514478 CABP4P57796 275 aa11.34□□□□□ -0.59
COPG1-209ENST00000514478 DZIP1LQ8IYY4 767 aaKnown RBP11.34□□□□□ -0.59
COPG1-209ENST00000514478 STK31Q9BXU1 1019 aa11.34□□□□□ -0.59
COPG1-209ENST00000514478 SLC52A2Q9HAB3 445 aa11.34□□□□□ -0.59
COPG1-209ENST00000514478 COG6Q9Y2V7 657 aa11.34□□□□□ -0.59
COPG1-209ENST00000514478 CHD4Q14839 1912 aa11.33□□□□□ -0.6
COPG1-209ENST00000514478 EXOC5O00471 708 aa11.33□□□□□ -0.6
COPG1-209ENST00000514478 ATF7IPQ6VMQ6 1270 aa11.33□□□□□ -0.6
COPG1-209ENST00000514478 NECTIN2Q92692 538 aa11.33□□□□□ -0.6
COPG1-209ENST00000514478 SPON1Q9HCB6 807 aa11.33□□□□□ -0.6
COPG1-209ENST00000514478 TNNQ9UQP3 1299 aa11.33□□□□□ -0.6
COPG1-209ENST00000514478 PAPPAQ13219 1627 aa11.33□□□□□ -0.6
COPG1-209ENST00000514478 RGPD3A6NKT7 1758 aaPredicted RBP11.33□□□□□ -0.6
COPG1-209ENST00000514478 RGPD4Q7Z3J3 1758 aa11.33□□□□□ -0.6
COPG1-209ENST00000514478 UBR2Q8IWV8 1755 aa11.33□□□□□ -0.6
COPG1-209ENST00000514478 SOS1Q07889 1333 aaPredicted RBP11.33□□□□□ -0.6
COPG1-209ENST00000514478 SPATA31A1Q5TZJ5 1347 aa11.33□□□□□ -0.6
COPG1-209ENST00000514478 N4BP2Q86UW6 1770 aaPredicted RBP11.32□□□□□ -0.6
COPG1-209ENST00000514478 KCNQ3O43525 872 aa11.32□□□□□ -0.6
COPG1-209ENST00000514478 EIF4A1P60842 406 aaKnown RBP11.32□□□□□ -0.6
COPG1-209ENST00000514478 CCDC30Q5VVM6 783 aa11.32□□□□□ -0.6
COPG1-209ENST00000514478 TTC5Q8N0Z6 440 aa11.32□□□□□ -0.6
COPG1-209ENST00000514478 NFATC2IPQ8NCF5 419 aa11.32□□□□□ -0.6
COPG1-209ENST00000514478 CDCA7Q9BWT1 371 aaPredicted RBP11.32□□□□□ -0.6
COPG1-209ENST00000514478 CHMP4AQ9BY43 222 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms