RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-223ENST00000514402 TLR1Q15399 786 aa8.8□□□□□ -1
MATR3-223ENST00000514402 PPARGC1BQ86YN6 1023 aaKnown RBP8.8□□□□□ -1
MATR3-223ENST00000514402 RHBDD1Q8TEB9 315 aa8.8□□□□□ -1
MATR3-223ENST00000514402 ZMYND15Q9H091 742 aa8.8□□□□□ -1
MATR3-223ENST00000514402 TMEM229AB2RXF0 380 aa8.79□□□□□ -1
MATR3-223ENST00000514402 RHOQP17081 205 aa8.79□□□□□ -1
MATR3-223ENST00000514402 SMTNP53814 917 aa8.79□□□□□ -1
MATR3-223ENST00000514402 INSM1Q01101 510 aaPredicted RBP8.79□□□□□ -1
MATR3-223ENST00000514402 POU4F2Q12837 409 aa8.79□□□□□ -1
MATR3-223ENST00000514402 TMEM214Q6NUQ4 689 aaKnown RBP8.79□□□□□ -1
MATR3-223ENST00000514402 DEPDC4Q8N2C3 294 aa8.79□□□□□ -1
MATR3-223ENST00000514402 PPP1R12CQ9BZL4 782 aa8.79□□□□□ -1
MATR3-223ENST00000514402 MAFBQ9Y5Q3 323 aaPredicted RBP8.79□□□□□ -1
MATR3-223ENST00000514402 PALM3A6NDB9 673 aaPredicted RBP8.78□□□□□ -1
MATR3-223ENST00000514402 H7C1W4 665 aa8.78□□□□□ -1
MATR3-223ENST00000514402 GMPRP36959 345 aa8.78□□□□□ -1
MATR3-223ENST00000514402 MTFR1Q15390 333 aa8.78□□□□□ -1
MATR3-223ENST00000514402 SV2AQ7L0J3 742 aa8.78□□□□□ -1
MATR3-223ENST00000514402 LARGE2Q8N3Y3 721 aa8.78□□□□□ -1
MATR3-223ENST00000514402 TIMMDC1Q9NPL8 285 aa8.78□□□□□ -1
MATR3-223ENST00000514402 TFIP11Q9UBB9 837 aaKnown RBP8.78□□□□□ -1
MATR3-223ENST00000514402 A0A1B0GTH6 734 aa8.77□□□□□ -1.01
MATR3-223ENST00000514402 PSME1Q06323 249 aa8.77□□□□□ -1.01
MATR3-223ENST00000514402 TRIM22Q8IYM9 498 aa8.77□□□□□ -1.01
MATR3-223ENST00000514402 MKRN1Q9UHC7 482 aaKnown RBP8.77□□□□□ -1.01
MATR3-223ENST00000514402 M0R2N6 131 aa8.76□□□□□ -1.01
MATR3-223ENST00000514402 CDK2AP1O14519 115 aa8.76□□□□□ -1.01
MATR3-223ENST00000514402 STAU1O95793 577 aaKnown RBP8.76□□□□□ -1.01
MATR3-223ENST00000514402 SIX5Q8N196 739 aa8.76□□□□□ -1.01
MATR3-223ENST00000514402 DNAAF2Q9NVR5 837 aaKnown RBP8.76□□□□□ -1.01
MATR3-223ENST00000514402 A6NJY4 79 aa8.75□□□□□ -1.01
MATR3-223ENST00000514402 F11P03951 625 aa8.75□□□□□ -1.01
MATR3-223ENST00000514402 LBRQ14739 615 aaKnown RBP8.75□□□□□ -1.01
MATR3-223ENST00000514402 C4orf17Q53FE4 359 aa8.75□□□□□ -1.01
MATR3-223ENST00000514402 NIFKQ9BYG3 293 aaKnown RBP8.75□□□□□ -1.01
MATR3-223ENST00000514402 ZNF777Q9ULD5 760 aaPredicted RBP8.75□□□□□ -1.01
MATR3-223ENST00000514402 ZBTB7BO15156 539 aaPredicted RBP8.74□□□□□ -1.01
MATR3-223ENST00000514402 CLDN10P78369 228 aa8.74□□□□□ -1.01
MATR3-223ENST00000514402 OGFOD1Q8N543 542 aa8.74□□□□□ -1.01
MATR3-223ENST00000514402 C1orf216Q8TAB5 229 aa8.74□□□□□ -1.01
MATR3-223ENST00000514402 ZNF358Q9NW07 568 aa8.74□□□□□ -1.01
MATR3-223ENST00000514402 CDC14CA4D256 554 aa8.73□□□□□ -1.01
MATR3-223ENST00000514402 CCDC102BQ68D86 513 aa8.73□□□□□ -1.01
MATR3-223ENST00000514402 FOXR1Q6PIV2 292 aa8.73□□□□□ -1.01
MATR3-223ENST00000514402 SERTAD1Q9UHV2 236 aa8.73□□□□□ -1.01
MATR3-223ENST00000514402 IQSEC3Q9UPP2 1182 aaPredicted RBP8.73□□□□□ -1.01
MATR3-223ENST00000514402 RBM19Q9Y4C8 960 aaKnown RBP8.73□□□□□ -1.01
MATR3-223ENST00000514402 VWA5B2Q8N398 1253 aa8.72□□□□□ -1.01
MATR3-223ENST00000514402 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.72□□□□□ -1.01
MATR3-223ENST00000514402 TPCN2Q8NHX9 752 aa8.72□□□□□ -1.01
MATR3-223ENST00000514402 ZNF837Q96EG3 531 aaPredicted RBP8.72□□□□□ -1.01
MATR3-223ENST00000514402 GAS2L1Q99501 681 aaPredicted RBP8.72□□□□□ -1.01
MATR3-223ENST00000514402 FAM196BA6NMK8 535 aa8.71□□□□□ -1.02
MATR3-223ENST00000514402 EPHA4P54764 986 aa8.71□□□□□ -1.02
MATR3-223ENST00000514402 LARP1Q6PKG0 1096 aaKnown RBP8.71□□□□□ -1.02
MATR3-223ENST00000514402 RIPOR1Q6ZS17 1223 aa8.71□□□□□ -1.02
MATR3-223ENST00000514402 ZNF295-AS1Q8N0V1 137 aa8.71□□□□□ -1.02
MATR3-223ENST00000514402 GPR161Q8N6U8 529 aaKnown RBP8.71□□□□□ -1.02
MATR3-223ENST00000514402 CUEDC1Q9NWM3 386 aaPredicted RBP8.71□□□□□ -1.02
MATR3-223ENST00000514402 SCHIP1Q9P0W5 487 aaPredicted RBP8.71□□□□□ -1.02
MATR3-223ENST00000514402 KIAA1024Q9UPX6 916 aa8.71□□□□□ -1.02
MATR3-223ENST00000514402 CSB-PGBD3P0DP91 1061 aa8.7□□□□□ -1.02
MATR3-223ENST00000514402 RASA1P20936 1047 aa8.7□□□□□ -1.02
MATR3-223ENST00000514402 LMOD1P29536 600 aaPredicted RBP8.7□□□□□ -1.02
MATR3-223ENST00000514402 PHKA2P46019 1235 aa8.7□□□□□ -1.02
MATR3-223ENST00000514402 FOXK2Q01167 660 aa8.7□□□□□ -1.02
MATR3-223ENST00000514402 KANK4Q5T7N3 995 aaPredicted RBP8.7□□□□□ -1.02
MATR3-223ENST00000514402 PGBD3Q8N328 593 aa8.7□□□□□ -1.02
MATR3-223ENST00000514402 VRTNQ9H8Y1 702 aa8.7□□□□□ -1.02
MATR3-223ENST00000514402 ZDHHC3Q9NYG2 299 aa8.7□□□□□ -1.02
MATR3-223ENST00000514402 DKK1O94907 266 aa8.69□□□□□ -1.02
MATR3-223ENST00000514402 PLA2G4AP47712 749 aa8.69□□□□□ -1.02
MATR3-223ENST00000514402 DBN1Q16643 649 aa8.69□□□□□ -1.02
MATR3-223ENST00000514402 NBPF1Q3BBV0 1214 aa8.69□□□□□ -1.02
MATR3-223ENST00000514402 CFAP70Q5T0N1 1121 aa8.69□□□□□ -1.02
MATR3-223ENST00000514402 ERICH6Q7L0X2 663 aa8.69□□□□□ -1.02
MATR3-223ENST00000514402 COL25A1Q9BXS0 654 aaPredicted RBP8.69□□□□□ -1.02
MATR3-223ENST00000514402 NUCKS1Q9H1E3 243 aaKnown RBP8.69□□□□□ -1.02
MATR3-223ENST00000514402 CRISPLD1Q9H336 500 aa8.69□□□□□ -1.02
MATR3-223ENST00000514402 MSX1P28360 303 aa8.68□□□□□ -1.02
MATR3-223ENST00000514402 TRERF1Q96PN7 1200 aa8.68□□□□□ -1.02
MATR3-223ENST00000514402 STK17AQ9UEE5 414 aa8.68□□□□□ -1.02
MATR3-223ENST00000514402 FAM181BA6NEQ2 426 aa8.67□□□□□ -1.02
MATR3-223ENST00000514402 SEC13P55735 322 aa8.67□□□□□ -1.02
MATR3-223ENST00000514402 PTK7Q13308 1070 aa8.67□□□□□ -1.02
MATR3-223ENST00000514402 TEAD4Q15561 434 aa8.67□□□□□ -1.02
MATR3-223ENST00000514402 EFHC2Q5JST6 749 aa8.67□□□□□ -1.02
MATR3-223ENST00000514402 ZSCAN1Q8NBB4 408 aa8.67□□□□□ -1.02
MATR3-223ENST00000514402 ZNF594Q96JF6 807 aaPredicted RBP8.67□□□□□ -1.02
MATR3-223ENST00000514402 CABP1Q9NZU7 370 aa8.67□□□□□ -1.02
MATR3-223ENST00000514402 USP17L15C9J2P7 530 aa8.66□□□□□ -1.02
MATR3-223ENST00000514402 USP17L10C9JJH3 530 aa8.66□□□□□ -1.02
MATR3-223ENST00000514402 USP17L13C9JLJ4 530 aa8.66□□□□□ -1.02
MATR3-223ENST00000514402 USP17L12C9JPN9 530 aa8.66□□□□□ -1.02
MATR3-223ENST00000514402 USP17L11C9JVI0 530 aa8.66□□□□□ -1.02
MATR3-223ENST00000514402 USP17L21D6R901 530 aa8.66□□□□□ -1.02
MATR3-223ENST00000514402 USP17L18D6R9N7 530 aa8.66□□□□□ -1.02
MATR3-223ENST00000514402 USP17L22D6RA61 530 aa8.66□□□□□ -1.02
MATR3-223ENST00000514402 USP17L17D6RBQ6 530 aa8.66□□□□□ -1.02
MATR3-223ENST00000514402 USP17L19D6RCP7 530 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms