RNA–Protein interactions for RNA: ENST00000514382.5

CCND3-220, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-220ENST00000514382 IGSF1Q8N6C5 1336 aa18.68■□□□□ 0.58
CCND3-220ENST00000514382 VIRMAQ69YN4 1812 aaKnown RBP18.67■□□□□ 0.58
CCND3-220ENST00000514382 BRCA1P38398 1863 aaKnown RBP18.67■□□□□ 0.58
CCND3-220ENST00000514382 GNPATO15228 680 aa18.66■□□□□ 0.58
CCND3-220ENST00000514382 AEBP1Q8IUX7 1158 aa18.66■□□□□ 0.58
CCND3-220ENST00000514382 TMOD3Q9NYL9 352 aa18.66■□□□□ 0.58
CCND3-220ENST00000514382 ZNF831Q5JPB2 1677 aa18.66■□□□□ 0.58
CCND3-220ENST00000514382 CICQ96RK0 1608 aaPredicted RBP18.65■□□□□ 0.58
CCND3-220ENST00000514382 GRIN3BO60391 1043 aa18.65■□□□□ 0.58
CCND3-220ENST00000514382 FLAD1Q8NFF5 587 aa18.65■□□□□ 0.58
CCND3-220ENST00000514382 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.65■□□□□ 0.58
CCND3-220ENST00000514382 TJP1Q07157 1748 aa18.65■□□□□ 0.58
CCND3-220ENST00000514382 HSPA5P11021 654 aaKnown RBP18.64■□□□□ 0.57
CCND3-220ENST00000514382 SSFA2P28290 1259 aa18.64■□□□□ 0.57
CCND3-220ENST00000514382 ATP6V1AP38606 617 aa18.64■□□□□ 0.57
CCND3-220ENST00000514382 IFNL2Q8IZJ0 200 aa18.64■□□□□ 0.57
CCND3-220ENST00000514382 ZNF526Q8TF50 670 aaPredicted RBP18.64■□□□□ 0.57
CCND3-220ENST00000514382 PXDNLA1KZ92 1463 aa18.64■□□□□ 0.57
CCND3-220ENST00000514382 PANK3Q9H999 370 aa18.63■□□□□ 0.57
CCND3-220ENST00000514382 ADAMTS7Q9UKP4 1686 aa18.63■□□□□ 0.57
CCND3-220ENST00000514382 SCN11AQ9UI33 1791 aa18.62■□□□□ 0.57
CCND3-220ENST00000514382 MMP10P09238 476 aa18.61■□□□□ 0.57
CCND3-220ENST00000514382 ARHGEF1Q92888 912 aaKnown RBP18.58■□□□□ 0.56
CCND3-220ENST00000514382 RBM42Q9BTD8 480 aaKnown RBP18.58■□□□□ 0.56
CCND3-220ENST00000514382 C10orf71Q711Q0 1435 aa18.57■□□□□ 0.56
CCND3-220ENST00000514382 ZNF530Q6P9A1 599 aaPredicted RBP18.57■□□□□ 0.56
CCND3-220ENST00000514382 A0A0G2JLW4 131 aa18.56■□□□□ 0.56
CCND3-220ENST00000514382 GYS1P13807 737 aa18.56■□□□□ 0.56
CCND3-220ENST00000514382 SRP68Q9UHB9 627 aaKnown RBP18.55■□□□□ 0.56
CCND3-220ENST00000514382 TIMELESSQ9UNS1 1208 aa18.55■□□□□ 0.56
CCND3-220ENST00000514382 ARFGEF1Q9Y6D6 1849 aa18.55■□□□□ 0.56
CCND3-220ENST00000514382 ERVV-2B6SEH9 535 aa18.54■□□□□ 0.56
CCND3-220ENST00000514382 KIF3CO14782 793 aa18.54■□□□□ 0.56
CCND3-220ENST00000514382 GPBP1L1Q9HC44 474 aaPredicted RBP18.54■□□□□ 0.56
CCND3-220ENST00000514382 CNTNAP4Q9C0A0 1308 aa18.53■□□□□ 0.56
CCND3-220ENST00000514382 PTCD1O75127 700 aaKnown RBP18.53■□□□□ 0.56
CCND3-220ENST00000514382 IL13P35225 146 aa18.53■□□□□ 0.56
CCND3-220ENST00000514382 DCAF5Q96JK2 942 aa18.53■□□□□ 0.56
CCND3-220ENST00000514382 AFDNP55196 1824 aaKnown RBP18.53■□□□□ 0.56
CCND3-220ENST00000514382 DPEP1P16444 411 aa18.52■□□□□ 0.56
CCND3-220ENST00000514382 KCNA3P22001 575 aa18.52■□□□□ 0.56
CCND3-220ENST00000514382 TRAPPC3LQ5T215 181 aa18.52■□□□□ 0.56
CCND3-220ENST00000514382 SULT6B1Q6IMI4 303 aa18.52■□□□□ 0.56
CCND3-220ENST00000514382 RTCBQ9Y3I0 505 aaKnown RBP18.52■□□□□ 0.56
CCND3-220ENST00000514382 SBF1O95248 1867 aa18.52■□□□□ 0.55
CCND3-220ENST00000514382 RPS6KA4O75676 772 aa18.51■□□□□ 0.55
CCND3-220ENST00000514382 EIF4G2P78344 907 aaKnown RBP eCLIP18.51■□□□□ 0.55
CCND3-220ENST00000514382 DDR1Q08345 913 aa18.51■□□□□ 0.55
CCND3-220ENST00000514382 PLEKHO1Q53GL0 409 aaPredicted RBP18.51■□□□□ 0.55
CCND3-220ENST00000514382 RC3H1Q5TC82 1133 aaKnown RBP18.51■□□□□ 0.55
CCND3-220ENST00000514382 NFATC2IPQ8NCF5 419 aa18.51■□□□□ 0.55
CCND3-220ENST00000514382 CABP4P57796 275 aa18.5■□□□□ 0.55
CCND3-220ENST00000514382 FKBP8Q14318 412 aa18.5■□□□□ 0.55
CCND3-220ENST00000514382 MORC1Q86VD1 984 aa18.5■□□□□ 0.55
CCND3-220ENST00000514382 LGR6Q9HBX8 967 aa18.5■□□□□ 0.55
CCND3-220ENST00000514382 PLEKHG2Q9H7P9 1386 aa18.5■□□□□ 0.55
CCND3-220ENST00000514382 CRKLP46109 303 aaKnown RBP18.49■□□□□ 0.55
CCND3-220ENST00000514382 AMER1Q5JTC6 1135 aaPredicted RBP18.49■□□□□ 0.55
CCND3-220ENST00000514382 INTS5Q6P9B9 1019 aaKnown RBP18.49■□□□□ 0.55
CCND3-220ENST00000514382 BCS1LQ9Y276 419 aa18.49■□□□□ 0.55
CCND3-220ENST00000514382 CLSPNQ9HAW4 1339 aa18.49■□□□□ 0.55
CCND3-220ENST00000514382 MTHFSP49914 203 aa18.48■□□□□ 0.55
CCND3-220ENST00000514382 KCPQ6ZWJ8 1503 aa18.48■□□□□ 0.55
CCND3-220ENST00000514382 MRC1P22897 1456 aa18.46■□□□□ 0.55
CCND3-220ENST00000514382 UBR2Q8IWV8 1755 aa18.46■□□□□ 0.55
CCND3-220ENST00000514382 HSP90AB1P08238 724 aaKnown RBP18.46■□□□□ 0.55
CCND3-220ENST00000514382 HSPA6P17066 643 aa18.46■□□□□ 0.55
CCND3-220ENST00000514382 SLC39A6Q13433 755 aa18.46■□□□□ 0.55
CCND3-220ENST00000514382 DNAJC10Q8IXB1 793 aa18.46■□□□□ 0.55
CCND3-220ENST00000514382 NLGN1Q8N2Q7 840 aa18.46■□□□□ 0.55
CCND3-220ENST00000514382 ADRA2BP18089 450 aa18.45■□□□□ 0.54
CCND3-220ENST00000514382 HMGB2P26583 209 aaKnown RBP18.45■□□□□ 0.54
CCND3-220ENST00000514382 RFC4P35249 363 aa18.45■□□□□ 0.54
CCND3-220ENST00000514382 TGFB2P61812 414 aa18.45■□□□□ 0.54
CCND3-220ENST00000514382 AMOTQ4VCS5 1084 aa18.45■□□□□ 0.54
CCND3-220ENST00000514382 NMRK2Q9NPI5 230 aa18.45■□□□□ 0.54
CCND3-220ENST00000514382 CCDC88AQ3V6T2 1871 aa18.45■□□□□ 0.54
CCND3-220ENST00000514382 USP42Q9H9J4 1324 aaKnown RBP18.45■□□□□ 0.54
CCND3-220ENST00000514382 NRXN2Q9P2S2 1712 aa18.44■□□□□ 0.54
CCND3-220ENST00000514382 HMOX1P09601 288 aa18.44■□□□□ 0.54
CCND3-220ENST00000514382 CHRNA5P30532 468 aa18.44■□□□□ 0.54
CCND3-220ENST00000514382 KIF7Q2M1P5 1343 aa18.44■□□□□ 0.54
CCND3-220ENST00000514382 C1orf141Q5JVX7 400 aa18.43■□□□□ 0.54
CCND3-220ENST00000514382 ARHGAP27Q6ZUM4 889 aa18.43■□□□□ 0.54
CCND3-220ENST00000514382 SIPA1L3O60292 1781 aaPredicted RBP18.42■□□□□ 0.54
CCND3-220ENST00000514382 DLEC1Q9Y238 1755 aa18.42■□□□□ 0.54
CCND3-220ENST00000514382 FCHSD2O94868 740 aa18.42■□□□□ 0.54
CCND3-220ENST00000514382 CCDC87Q9NVE4 849 aa18.42■□□□□ 0.54
CCND3-220ENST00000514382 PARP3Q9Y6F1 533 aa18.42■□□□□ 0.54
CCND3-220ENST00000514382 ANKRD31Q8N7Z5 1873 aa18.41■□□□□ 0.54
CCND3-220ENST00000514382 COL3A1P02461 1466 aaPredicted RBP18.41■□□□□ 0.54
CCND3-220ENST00000514382 POLRMTO00411 1230 aaKnown RBP18.41■□□□□ 0.54
CCND3-220ENST00000514382 TM4SF1P30408 202 aa18.41■□□□□ 0.54
CCND3-220ENST00000514382 PRELPP51888 382 aa18.41■□□□□ 0.54
CCND3-220ENST00000514382 BCL2L12Q9HB09 334 aa18.41■□□□□ 0.54
CCND3-220ENST00000514382 SOS1Q07889 1333 aaPredicted RBP18.41■□□□□ 0.54
CCND3-220ENST00000514382 PER1O15534 1290 aaPredicted RBP18.4■□□□□ 0.54
CCND3-220ENST00000514382 RNMTO43148 476 aaKnown RBP18.4■□□□□ 0.54
CCND3-220ENST00000514382 MTHFSDQ2M296 383 aaKnown RBP18.4■□□□□ 0.54
CCND3-220ENST00000514382 USPL1Q5W0Q7 1092 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms