RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 TOGARAM1Q9Y4F4 1720 aa4.79□□□□□ -1.64
CHD1-211ENST00000514344 CNTNAP1P78357 1384 aa4.79□□□□□ -1.64
CHD1-211ENST00000514344 PALLDQ8WX93 1383 aa4.79□□□□□ -1.64
CHD1-211ENST00000514344 TAF1LQ8IZX4 1826 aa4.79□□□□□ -1.64
CHD1-211ENST00000514344 TSKSQ9UJT2 592 aa4.79□□□□□ -1.64
CHD1-211ENST00000514344 C4BP0C0L5 1744 aa4.79□□□□□ -1.64
CHD1-211ENST00000514344 KIAA1551Q9HCM1 1747 aa4.79□□□□□ -1.64
CHD1-211ENST00000514344 GLTPD2A6NH11 291 aa4.78□□□□□ -1.64
CHD1-211ENST00000514344 GNPATO15228 680 aa4.78□□□□□ -1.64
CHD1-211ENST00000514344 NFAT5O94916 1531 aa4.78□□□□□ -1.64
CHD1-211ENST00000514344 TTC21BQ7Z4L5 1316 aa4.78□□□□□ -1.64
CHD1-211ENST00000514344 SBF1O95248 1867 aa4.78□□□□□ -1.64
CHD1-211ENST00000514344 UBR3Q6ZT12 1888 aa4.78□□□□□ -1.64
CHD1-211ENST00000514344 KCNA3P22001 575 aa4.78□□□□□ -1.64
CHD1-211ENST00000514344 GRM1Q13255 1194 aa4.78□□□□□ -1.64
CHD1-211ENST00000514344 DALRD3Q5D0E6 543 aaKnown RBP4.78□□□□□ -1.64
CHD1-211ENST00000514344 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.78□□□□□ -1.64
CHD1-211ENST00000514344 PIM2Q9P1W9 311 aa4.78□□□□□ -1.64
CHD1-211ENST00000514344 BRCA1P38398 1863 aaKnown RBP4.78□□□□□ -1.64
CHD1-211ENST00000514344 QRICH2Q9H0J4 1663 aa4.78□□□□□ -1.64
CHD1-211ENST00000514344 ZCRB1Q8TBF4 217 aaKnown RBP4.77□□□□□ -1.65
CHD1-211ENST00000514344 VCANP13611 3396 aa4.77□□□□□ -1.65
CHD1-211ENST00000514344 PITPNM1O00562 1244 aa4.77□□□□□ -1.65
CHD1-211ENST00000514344 SSFA2P28290 1259 aa4.77□□□□□ -1.65
CHD1-211ENST00000514344 CHRNA5P30532 468 aa4.77□□□□□ -1.65
CHD1-211ENST00000514344 SAMD1Q6SPF0 538 aaPredicted RBP4.77□□□□□ -1.65
CHD1-211ENST00000514344 DCAF5Q96JK2 942 aa4.77□□□□□ -1.65
CHD1-211ENST00000514344 KIF13BQ9NQT8 1826 aa4.77□□□□□ -1.65
CHD1-211ENST00000514344 ARFGEF1Q9Y6D6 1849 aa4.77□□□□□ -1.65
CHD1-211ENST00000514344 POTECB2RU33 542 aa4.77□□□□□ -1.65
CHD1-211ENST00000514344 CCDC87Q9NVE4 849 aa4.77□□□□□ -1.65
CHD1-211ENST00000514344 LTN1O94822 1766 aa4.77□□□□□ -1.65
CHD1-211ENST00000514344 CHADLQ6NUI6 762 aa4.76□□□□□ -1.65
CHD1-211ENST00000514344 LINC00116Q8NCU8 138 aa4.76□□□□□ -1.65
CHD1-211ENST00000514344 LMNB1P20700 586 aa4.76□□□□□ -1.65
CHD1-211ENST00000514344 SOX10P56693 466 aa4.76□□□□□ -1.65
CHD1-211ENST00000514344 TMF1P82094 1093 aa4.76□□□□□ -1.65
CHD1-211ENST00000514344 PAXIP1Q6ZW49 1069 aaPredicted RBP4.76□□□□□ -1.65
CHD1-211ENST00000514344 BEGAINQ9BUH8 593 aa4.76□□□□□ -1.65
CHD1-211ENST00000514344 MCOLN1Q9GZU1 580 aa4.76□□□□□ -1.65
CHD1-211ENST00000514344 UNC80Q8N2C7 3258 aa4.76□□□□□ -1.65
CHD1-211ENST00000514344 C19orf67A6NJJ6 358 aa4.75□□□□□ -1.65
CHD1-211ENST00000514344 MAP2K1Q02750 393 aaPredicted RBP4.75□□□□□ -1.65
CHD1-211ENST00000514344 DPY19L2Q6NUT2 758 aa4.75□□□□□ -1.65
CHD1-211ENST00000514344 PARP3Q9Y6F1 533 aa4.75□□□□□ -1.65
CHD1-211ENST00000514344 MEGF6O75095 1541 aa4.75□□□□□ -1.65
CHD1-211ENST00000514344 NSD3Q9BZ95 1437 aa4.75□□□□□ -1.65
CHD1-211ENST00000514344 RANBP2P49792 3224 aaKnown RBP4.75□□□□□ -1.65
CHD1-211ENST00000514344 TMEM88BA6NKF7 163 aa4.75□□□□□ -1.65
CHD1-211ENST00000514344 PRPF38BQ5VTL8 546 aaKnown RBP4.75□□□□□ -1.65
CHD1-211ENST00000514344 NLGN1Q8N2Q7 840 aa4.75□□□□□ -1.65
CHD1-211ENST00000514344 USHBP1Q8N6Y0 703 aa4.75□□□□□ -1.65
CHD1-211ENST00000514344 CASP8AP2Q9UKL3 1982 aa4.75□□□□□ -1.65
CHD1-211ENST00000514344 CCDC88AQ3V6T2 1871 aa4.75□□□□□ -1.65
CHD1-211ENST00000514344 LOC102724428A0A0B4J2F2 783 aa4.74□□□□□ -1.65
CHD1-211ENST00000514344 SIK1P57059 783 aa4.74□□□□□ -1.65
CHD1-211ENST00000514344 DEFB115Q30KQ5 88 aa4.74□□□□□ -1.65
CHD1-211ENST00000514344 NME9Q86XW9 330 aa4.74□□□□□ -1.65
CHD1-211ENST00000514344 ABT1Q9ULW3 272 aaKnown RBP4.74□□□□□ -1.65
CHD1-211ENST00000514344 VIRMAQ69YN4 1812 aaKnown RBP4.74□□□□□ -1.65
CHD1-211ENST00000514344 ATP6V1AP38606 617 aa4.74□□□□□ -1.65
CHD1-211ENST00000514344 NBPF1Q3BBV0 1214 aa4.74□□□□□ -1.65
CHD1-211ENST00000514344 LAMA3Q16787 3333 aa4.74□□□□□ -1.65
CHD1-211ENST00000514344 TIAM2Q8IVF5 1701 aa4.74□□□□□ -1.65
CHD1-211ENST00000514344 TTC21AQ8NDW8 1320 aa4.74□□□□□ -1.65
CHD1-211ENST00000514344 WDR33Q9C0J8 1336 aaKnown RBP4.74□□□□□ -1.65
CHD1-211ENST00000514344 CENPJQ9HC77 1338 aaPredicted RBP4.74□□□□□ -1.65
CHD1-211ENST00000514344 ZC3H4Q9UPT8 1303 aaKnown RBP4.74□□□□□ -1.65
CHD1-211ENST00000514344 KTN1Q86UP2 1357 aaKnown RBP4.74□□□□□ -1.65
CHD1-211ENST00000514344 DDNO94850 711 aaPredicted RBP4.74□□□□□ -1.65
CHD1-211ENST00000514344 HMGB2P26583 209 aaKnown RBP4.74□□□□□ -1.65
CHD1-211ENST00000514344 ITPK1Q13572 414 aa4.74□□□□□ -1.65
CHD1-211ENST00000514344 DGKZQ13574 1117 aa4.74□□□□□ -1.65
CHD1-211ENST00000514344 TRAPPC3LQ5T215 181 aa4.74□□□□□ -1.65
CHD1-211ENST00000514344 ZNF692Q9BU19 519 aaPredicted RBP4.74□□□□□ -1.65
CHD1-211ENST00000514344 CUL9Q8IWT3 2517 aa4.73□□□□□ -1.65
CHD1-211ENST00000514344 C4AP0C0L4 1744 aa4.73□□□□□ -1.65
CHD1-211ENST00000514344 RGPD2P0DJD1 1756 aa4.73□□□□□ -1.65
CHD1-211ENST00000514344 GYS1P13807 737 aa4.73□□□□□ -1.65
CHD1-211ENST00000514344 FBLN1P23142 703 aa4.73□□□□□ -1.65
CHD1-211ENST00000514344 RFC4P35249 363 aa4.73□□□□□ -1.65
CHD1-211ENST00000514344 ERFEQ4G0M1 354 aa4.73□□□□□ -1.65
CHD1-211ENST00000514344 EAPPQ56P03 285 aaPredicted RBP4.73□□□□□ -1.65
CHD1-211ENST00000514344 RTCBQ9Y3I0 505 aaKnown RBP4.73□□□□□ -1.65
CHD1-211ENST00000514344 PASKQ96RG2 1323 aa4.73□□□□□ -1.65
CHD1-211ENST00000514344 PIGBQ92521 554 aa4.73□□□□□ -1.65
CHD1-211ENST00000514344 ARHGEF1Q92888 912 aaKnown RBP4.73□□□□□ -1.65
CHD1-211ENST00000514344 SMARCC1Q92922 1105 aaPredicted RBP4.73□□□□□ -1.65
CHD1-211ENST00000514344 CLEC11AQ9Y240 323 aa4.73□□□□□ -1.65
CHD1-211ENST00000514344 RAPGEF4Q8WZA2 1011 aa4.72□□□□□ -1.65
CHD1-211ENST00000514344 ASAP1Q9ULH1 1129 aa4.72□□□□□ -1.65
CHD1-211ENST00000514344 KDM6AO15550 1401 aaPredicted RBP4.72□□□□□ -1.65
CHD1-211ENST00000514344 RASSF10A6NK89 507 aa4.72□□□□□ -1.65
CHD1-211ENST00000514344 NFKBIEO00221 500 aa4.72□□□□□ -1.65
CHD1-211ENST00000514344 IP6K1Q92551 441 aa4.72□□□□□ -1.65
CHD1-211ENST00000514344 GPR101Q96P66 508 aaPredicted RBP4.72□□□□□ -1.65
CHD1-211ENST00000514344 ITGBL1O95965 494 aaPredicted RBP4.71□□□□□ -1.65
CHD1-211ENST00000514344 NBPF6Q5VWK0 638 aa4.71□□□□□ -1.65
CHD1-211ENST00000514344 MAP1SQ66K74 1059 aaPredicted RBP4.71□□□□□ -1.65
CHD1-211ENST00000514344 CYP4F22Q6NT55 531 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms