RNA–Protein interactions for RNA: ENST00000514316.1

SEMA6A-213, Transcript of semaphorin 6A, humanhuman

TSL 4

Gene SEMA6A, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-213ENST00000514316 CNKSR1Q969H4 720 aa12.1□□□□□ -0.47
SEMA6A-213ENST00000514316 INSM2Q96T92 566 aaPredicted RBP12.1□□□□□ -0.47
SEMA6A-213ENST00000514316 POLMQ9NP87 494 aaPredicted RBP12.1□□□□□ -0.47
SEMA6A-213ENST00000514316 RAB6BQ9NRW1 208 aa12.1□□□□□ -0.47
SEMA6A-213ENST00000514316 ACIN1Q9UKV3 1341 aaKnown RBP12.1□□□□□ -0.47
SEMA6A-213ENST00000514316 TMEM229AB2RXF0 380 aa12.09□□□□□ -0.47
SEMA6A-213ENST00000514316 IL2RAP01589 272 aa12.09□□□□□ -0.47
SEMA6A-213ENST00000514316 RNF144AP50876 292 aaPredicted RBP12.08□□□□□ -0.48
SEMA6A-213ENST00000514316 ANKMY2Q8IV38 441 aa12.08□□□□□ -0.48
SEMA6A-213ENST00000514316 TTLL8A6PVC2 850 aa12.07□□□□□ -0.48
SEMA6A-213ENST00000514316 M0R2N6 131 aa12.07□□□□□ -0.48
SEMA6A-213ENST00000514316 SEC13P55735 322 aa12.07□□□□□ -0.48
SEMA6A-213ENST00000514316 ZNF358Q9NW07 568 aa12.07□□□□□ -0.48
SEMA6A-213ENST00000514316 NOVA2Q9UNW9 492 aaKnown RBP12.07□□□□□ -0.48
SEMA6A-213ENST00000514316 HRH3Q9Y5N1 445 aa12.07□□□□□ -0.48
SEMA6A-213ENST00000514316 SOS2Q07890 1332 aaPredicted RBP12.07□□□□□ -0.48
SEMA6A-213ENST00000514316 DKK1O94907 266 aa12.06□□□□□ -0.48
SEMA6A-213ENST00000514316 STAU1O95793 577 aaKnown RBP12.06□□□□□ -0.48
SEMA6A-213ENST00000514316 CTSOP43234 321 aaPredicted RBP12.06□□□□□ -0.48
SEMA6A-213ENST00000514316 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.06□□□□□ -0.48
SEMA6A-213ENST00000514316 TRIM47Q96LD4 638 aa12.06□□□□□ -0.48
SEMA6A-213ENST00000514316 SLC4A9Q96Q91 983 aa12.06□□□□□ -0.48
SEMA6A-213ENST00000514316 CENPCQ03188 943 aa12.05□□□□□ -0.48
SEMA6A-213ENST00000514316 DPYDQ12882 1025 aa12.05□□□□□ -0.48
SEMA6A-213ENST00000514316 FAM200AQ8TCP9 573 aa12.05□□□□□ -0.48
SEMA6A-213ENST00000514316 GMPR2Q9P2T1 348 aaKnown RBP12.05□□□□□ -0.48
SEMA6A-213ENST00000514316 TLR1Q15399 786 aa12.04□□□□□ -0.48
SEMA6A-213ENST00000514316 FOXD4L5Q5VV16 416 aaPredicted RBP12.04□□□□□ -0.48
SEMA6A-213ENST00000514316 ARXQ96QS3 562 aa12.04□□□□□ -0.48
SEMA6A-213ENST00000514316 SERTAD1Q9UHV2 236 aa12.04□□□□□ -0.48
SEMA6A-213ENST00000514316 GTF2E1P29083 439 aaPredicted RBP12.03□□□□□ -0.48
SEMA6A-213ENST00000514316 SMTNP53814 917 aa12.03□□□□□ -0.48
SEMA6A-213ENST00000514316 SLC27A3Q5K4L6 730 aa12.03□□□□□ -0.48
SEMA6A-213ENST00000514316 RNF217Q8TC41 542 aa12.03□□□□□ -0.48
SEMA6A-213ENST00000514316 SFI1A8K8P3 1242 aa12.02□□□□□ -0.49
SEMA6A-213ENST00000514316 ZSCAN10Q96SZ4 725 aaPredicted RBP12.02□□□□□ -0.49
SEMA6A-213ENST00000514316 FHDC1Q9C0D6 1143 aaPredicted RBP12.02□□□□□ -0.49
SEMA6A-213ENST00000514316 GRIP2Q9C0E4 1043 aa12.02□□□□□ -0.49
SEMA6A-213ENST00000514316 A6NJY4 79 aa12.01□□□□□ -0.49
SEMA6A-213ENST00000514316 MAN1A2O60476 641 aa12.01□□□□□ -0.49
SEMA6A-213ENST00000514316 MTFR1Q15390 333 aa12.01□□□□□ -0.49
SEMA6A-213ENST00000514316 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.01□□□□□ -0.49
SEMA6A-213ENST00000514316 ZMIZ1Q9ULJ6 1067 aa12.01□□□□□ -0.49
SEMA6A-213ENST00000514316 C11orf95C9JLR9 678 aaPredicted RBP12□□□□□ -0.49
SEMA6A-213ENST00000514316 LYSMD3Q7Z3D4 306 aa12□□□□□ -0.49
SEMA6A-213ENST00000514316 NBPF15Q8N660 670 aa12□□□□□ -0.49
SEMA6A-213ENST00000514316 CSB-PGBD3P0DP91 1061 aa11.99□□□□□ -0.49
SEMA6A-213ENST00000514316 DNMT3LQ9UJW3 386 aa11.99□□□□□ -0.49
SEMA6A-213ENST00000514316 CDK2AP1O14519 115 aa11.98□□□□□ -0.49
SEMA6A-213ENST00000514316 SWI5Q1ZZU3 235 aa11.98□□□□□ -0.49
SEMA6A-213ENST00000514316 TMEM214Q6NUQ4 689 aaKnown RBP11.98□□□□□ -0.49
SEMA6A-213ENST00000514316 PPARGC1BQ86YN6 1023 aaKnown RBP11.98□□□□□ -0.49
SEMA6A-213ENST00000514316 FIGNL2A6NMB9 653 aa11.97□□□□□ -0.49
SEMA6A-213ENST00000514316 SPATA31C2B4DYI2 1134 aa11.97□□□□□ -0.49
SEMA6A-213ENST00000514316 EPHA4P54764 986 aa11.97□□□□□ -0.49
SEMA6A-213ENST00000514316 GNASQ5JWF2 1037 aa11.97□□□□□ -0.49
SEMA6A-213ENST00000514316 TSEN2Q8NCE0 465 aaKnown RBP11.97□□□□□ -0.49
SEMA6A-213ENST00000514316 STK32AQ8WU08 396 aa11.97□□□□□ -0.49
SEMA6A-213ENST00000514316 SCHIP1Q9P0W5 487 aaPredicted RBP11.97□□□□□ -0.49
SEMA6A-213ENST00000514316 SNRPBP14678 240 aaKnown RBP11.96□□□□□ -0.49
SEMA6A-213ENST00000514316 WDR44Q5JSH3 913 aa11.96□□□□□ -0.49
SEMA6A-213ENST00000514316 TNS4Q8IZW8 715 aa11.96□□□□□ -0.49
SEMA6A-213ENST00000514316 RHBDD1Q8TEB9 315 aa11.96□□□□□ -0.49
SEMA6A-213ENST00000514316 HINFPQ9BQA5 517 aa11.96□□□□□ -0.49
SEMA6A-213ENST00000514316 FOXK2Q01167 660 aa11.95□□□□□ -0.5
SEMA6A-213ENST00000514316 TMEM164Q5U3C3 297 aa11.95□□□□□ -0.5
SEMA6A-213ENST00000514316 PRICKLE2Q7Z3G6 844 aa11.95□□□□□ -0.5
SEMA6A-213ENST00000514316 PDE4CQ08493 712 aa11.94□□□□□ -0.5
SEMA6A-213ENST00000514316 TAS1R3Q7RTX0 852 aa11.94□□□□□ -0.5
SEMA6A-213ENST00000514316 IQSEC3Q9UPP2 1182 aaPredicted RBP11.94□□□□□ -0.5
SEMA6A-213ENST00000514316 USTQ9Y2C2 406 aa11.94□□□□□ -0.5
SEMA6A-213ENST00000514316 POTECB2RU33 542 aa11.93□□□□□ -0.5
SEMA6A-213ENST00000514316 NBPF10Q6P3W6 841 aaKnown RBP11.93□□□□□ -0.5
SEMA6A-213ENST00000514316 GAS2L2Q8NHY3 880 aa11.93□□□□□ -0.5
SEMA6A-213ENST00000514316 NIFKQ9BYG3 293 aaKnown RBP11.93□□□□□ -0.5
SEMA6A-213ENST00000514316 NACADO15069 1562 aa11.92□□□□□ -0.5
SEMA6A-213ENST00000514316 ZNF787Q6DD87 383 aa11.92□□□□□ -0.5
SEMA6A-213ENST00000514316 FAM69CQ0P6D2 419 aa11.91□□□□□ -0.5
SEMA6A-213ENST00000514316 POU4F2Q12837 409 aa11.91□□□□□ -0.5
SEMA6A-213ENST00000514316 SLC9A9Q8IVB4 645 aa11.91□□□□□ -0.5
SEMA6A-213ENST00000514316 TSPAN10Q9H1Z9 355 aaPredicted RBP11.91□□□□□ -0.5
SEMA6A-213ENST00000514316 CHMP3Q9Y3E7 222 aa11.91□□□□□ -0.5
SEMA6A-213ENST00000514316 SOBPA7XYQ1 873 aa11.9□□□□□ -0.5
SEMA6A-213ENST00000514316 IGFBP4P22692 258 aa11.89□□□□□ -0.51
SEMA6A-213ENST00000514316 PSMA6P60900 246 aaKnown RBP11.89□□□□□ -0.51
SEMA6A-213ENST00000514316 C4orf17Q53FE4 359 aa11.89□□□□□ -0.51
SEMA6A-213ENST00000514316 CLP1Q92989 425 aaKnown RBP11.89□□□□□ -0.51
SEMA6A-213ENST00000514316 CABP1Q9NZU7 370 aa11.89□□□□□ -0.51
SEMA6A-213ENST00000514316 ATAD2Q6PL18 1390 aa11.89□□□□□ -0.51
SEMA6A-213ENST00000514316 UNC13AQ9UPW8 1703 aa11.89□□□□□ -0.51
SEMA6A-213ENST00000514316 TMEM88BA6NKF7 163 aa11.88□□□□□ -0.51
SEMA6A-213ENST00000514316 RHOQP17081 205 aa11.88□□□□□ -0.51
SEMA6A-213ENST00000514316 TEAD4Q15561 434 aa11.88□□□□□ -0.51
SEMA6A-213ENST00000514316 ZNF295-AS1Q8N0V1 137 aa11.88□□□□□ -0.51
SEMA6A-213ENST00000514316 STAG2Q8N3U4 1231 aa11.88□□□□□ -0.51
SEMA6A-213ENST00000514316 RETREG2Q8NC44 543 aa11.88□□□□□ -0.51
SEMA6A-213ENST00000514316 SCG3Q8WXD2 468 aaKnown RBP11.88□□□□□ -0.51
SEMA6A-213ENST00000514316 USP3Q9Y6I4 520 aa11.88□□□□□ -0.51
SEMA6A-213ENST00000514316 WEE1P30291 646 aa11.87□□□□□ -0.51
SEMA6A-213ENST00000514316 PTSQ03393 145 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms