RNA–Protein interactions for RNA: ENST00000514233.1

SDHA-217, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-217ENST00000514233 GNPATO15228 680 aa12.41□□□□□ -0.42
SDHA-217ENST00000514233 ATP6V1AP38606 617 aa12.41□□□□□ -0.42
SDHA-217ENST00000514233 EIF4A2Q14240 407 aaKnown RBP12.41□□□□□ -0.42
SDHA-217ENST00000514233 GPBP1L1Q9HC44 474 aaPredicted RBP12.41□□□□□ -0.42
SDHA-217ENST00000514233 KDRP35968 1356 aa12.41□□□□□ -0.42
SDHA-217ENST00000514233 CCER1Q8TC90 406 aaPredicted RBP12.4□□□□□ -0.42
SDHA-217ENST00000514233 HSP90AB1P08238 724 aaKnown RBP12.39□□□□□ -0.43
SDHA-217ENST00000514233 ADRA2BP18089 450 aa12.39□□□□□ -0.43
SDHA-217ENST00000514233 RC3H1Q5TC82 1133 aaKnown RBP12.39□□□□□ -0.43
SDHA-217ENST00000514233 SMIM5Q71RC9 77 aa12.39□□□□□ -0.43
SDHA-217ENST00000514233 DCAF5Q96JK2 942 aa12.39□□□□□ -0.43
SDHA-217ENST00000514233 CICQ96RK0 1608 aaPredicted RBP12.39□□□□□ -0.43
SDHA-217ENST00000514233 MMP10P09238 476 aa12.38□□□□□ -0.43
SDHA-217ENST00000514233 KIF13BQ9NQT8 1826 aa12.38□□□□□ -0.43
SDHA-217ENST00000514233 HSPA5P11021 654 aaKnown RBP12.37□□□□□ -0.43
SDHA-217ENST00000514233 TGFB2P61812 414 aa12.37□□□□□ -0.43
SDHA-217ENST00000514233 AMOTQ4VCS5 1084 aa12.37□□□□□ -0.43
SDHA-217ENST00000514233 TRAPPC3LQ5T215 181 aa12.37□□□□□ -0.43
SDHA-217ENST00000514233 NLGN1Q8N2Q7 840 aa12.37□□□□□ -0.43
SDHA-217ENST00000514233 SLC4A9Q96Q91 983 aa12.37□□□□□ -0.43
SDHA-217ENST00000514233 RTCBQ9Y3I0 505 aaKnown RBP12.37□□□□□ -0.43
SDHA-217ENST00000514233 PXDNLA1KZ92 1463 aa12.37□□□□□ -0.43
SDHA-217ENST00000514233 VIRMAQ69YN4 1812 aaKnown RBP12.37□□□□□ -0.43
SDHA-217ENST00000514233 CNTNAP4Q9C0A0 1308 aa12.37□□□□□ -0.43
SDHA-217ENST00000514233 TNNT2P45379 298 aaPredicted RBP12.36□□□□□ -0.43
SDHA-217ENST00000514233 PLEKHO1Q53GL0 409 aaPredicted RBP12.36□□□□□ -0.43
SDHA-217ENST00000514233 C10orf71Q711Q0 1435 aa12.36□□□□□ -0.43
SDHA-217ENST00000514233 COL5A3P25940 1745 aaPredicted RBP12.35□□□□□ -0.43
SDHA-217ENST00000514233 HSPA6P17066 643 aa12.35□□□□□ -0.43
SDHA-217ENST00000514233 EIF4G2P78344 907 aaKnown RBP eCLIP12.35□□□□□ -0.43
SDHA-217ENST00000514233 KDM6AO15550 1401 aaPredicted RBP12.35□□□□□ -0.43
SDHA-217ENST00000514233 KIAA1551Q9HCM1 1747 aa12.34□□□□□ -0.43
SDHA-217ENST00000514233 RPS6KA4O75676 772 aa12.34□□□□□ -0.43
SDHA-217ENST00000514233 GYS1P13807 737 aa12.34□□□□□ -0.43
SDHA-217ENST00000514233 ARHGEF1Q92888 912 aaKnown RBP12.34□□□□□ -0.43
SDHA-217ENST00000514233 PCNTO95613 3336 aa12.33□□□□□ -0.44
SDHA-217ENST00000514233 KIF3CO14782 793 aa12.33□□□□□ -0.44
SDHA-217ENST00000514233 CABP4P57796 275 aa12.33□□□□□ -0.44
SDHA-217ENST00000514233 IFFO2Q5TF58 517 aa12.33□□□□□ -0.44
SDHA-217ENST00000514233 ZNF530Q6P9A1 599 aaPredicted RBP12.33□□□□□ -0.44
SDHA-217ENST00000514233 ZNF526Q8TF50 670 aaPredicted RBP12.33□□□□□ -0.44
SDHA-217ENST00000514233 PANK3Q9H999 370 aa12.33□□□□□ -0.44
SDHA-217ENST00000514233 WWC3Q9ULE0 1092 aa12.33□□□□□ -0.44
SDHA-217ENST00000514233 C4AP0C0L4 1744 aa12.32□□□□□ -0.44
SDHA-217ENST00000514233 RFC4P35249 363 aa12.32□□□□□ -0.44
SDHA-217ENST00000514233 MTHFSP49914 203 aa12.32□□□□□ -0.44
SDHA-217ENST00000514233 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
SDHA-217ENST00000514233 CCDC87Q9NVE4 849 aa12.32□□□□□ -0.44
SDHA-217ENST00000514233 MYH14Q7Z406 1995 aaKnown RBP12.32□□□□□ -0.44
SDHA-217ENST00000514233 A0A0G2JLW4 131 aa12.31□□□□□ -0.44
SDHA-217ENST00000514233 C1orf141Q5JVX7 400 aa12.31□□□□□ -0.44
SDHA-217ENST00000514233 BRCA1P38398 1863 aaKnown RBP12.3□□□□□ -0.44
SDHA-217ENST00000514233 KCNA3P22001 575 aa12.3□□□□□ -0.44
SDHA-217ENST00000514233 MORC1Q86VD1 984 aa12.3□□□□□ -0.44
SDHA-217ENST00000514233 AEBP1Q8IUX7 1158 aa12.3□□□□□ -0.44
SDHA-217ENST00000514233 NFATC2IPQ8NCF5 419 aa12.3□□□□□ -0.44
SDHA-217ENST00000514233 BCS1LQ9Y276 419 aa12.3□□□□□ -0.44
SDHA-217ENST00000514233 PARP3Q9Y6F1 533 aa12.3□□□□□ -0.44
SDHA-217ENST00000514233 N4BP2Q86UW6 1770 aaPredicted RBP12.3□□□□□ -0.44
SDHA-217ENST00000514233 DPEP1P16444 411 aa12.29□□□□□ -0.44
SDHA-217ENST00000514233 CRKLP46109 303 aaKnown RBP12.29□□□□□ -0.44
SDHA-217ENST00000514233 USP42Q9H9J4 1324 aaKnown RBP12.29□□□□□ -0.44
SDHA-217ENST00000514233 PTCD1O75127 700 aaKnown RBP12.28□□□□□ -0.44
SDHA-217ENST00000514233 TOMM70O94826 608 aa12.28□□□□□ -0.44
SDHA-217ENST00000514233 IL13P35225 146 aa12.28□□□□□ -0.44
SDHA-217ENST00000514233 SULT6B1Q6IMI4 303 aa12.28□□□□□ -0.44
SDHA-217ENST00000514233 SCN11AQ9UI33 1791 aa12.28□□□□□ -0.44
SDHA-217ENST00000514233 FCHSD2O94868 740 aa12.27□□□□□ -0.45
SDHA-217ENST00000514233 APLP1P51693 650 aa12.27□□□□□ -0.45
SDHA-217ENST00000514233 AKAP4Q5JQC9 854 aa12.27□□□□□ -0.45
SDHA-217ENST00000514233 ARHGAP27Q6ZUM4 889 aa12.27□□□□□ -0.45
SDHA-217ENST00000514233 PIM2Q9P1W9 311 aa12.27□□□□□ -0.45
SDHA-217ENST00000514233 KNSTRNQ9Y448 316 aa12.27□□□□□ -0.45
SDHA-217ENST00000514233 ARFGEF1Q9Y6D6 1849 aa12.27□□□□□ -0.45
SDHA-217ENST00000514233 TJP1Q07157 1748 aa12.26□□□□□ -0.45
SDHA-217ENST00000514233 DDR1Q08345 913 aa12.26□□□□□ -0.45
SDHA-217ENST00000514233 FKBP8Q14318 412 aa12.26□□□□□ -0.45
SDHA-217ENST00000514233 INTS5Q6P9B9 1019 aaKnown RBP12.26□□□□□ -0.45
SDHA-217ENST00000514233 MRC1P22897 1456 aa12.26□□□□□ -0.45
SDHA-217ENST00000514233 ADAMTS7Q9UKP4 1686 aa12.26□□□□□ -0.45
SDHA-217ENST00000514233 TM4SF1P30408 202 aa12.25□□□□□ -0.45
SDHA-217ENST00000514233 DALRD3Q5D0E6 543 aaKnown RBP12.25□□□□□ -0.45
SDHA-217ENST00000514233 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
SDHA-217ENST00000514233 SLC52A2Q9HAB3 445 aa12.25□□□□□ -0.45
SDHA-217ENST00000514233 SRP68Q9UHB9 627 aaKnown RBP12.25□□□□□ -0.45
SDHA-217ENST00000514233 POLRMTO00411 1230 aaKnown RBP12.24□□□□□ -0.45
SDHA-217ENST00000514233 KIF7Q2M1P5 1343 aa12.24□□□□□ -0.45
SDHA-217ENST00000514233 C9orf131Q5VYM1 1079 aa12.24□□□□□ -0.45
SDHA-217ENST00000514233 RBM46Q8TBY0 533 aaKnown RBP12.24□□□□□ -0.45
SDHA-217ENST00000514233 SOS1Q07889 1333 aaPredicted RBP12.23□□□□□ -0.45
SDHA-217ENST00000514233 ZPR1O75312 459 aa12.23□□□□□ -0.45
SDHA-217ENST00000514233 DNAJC5GQ8N7S2 189 aa12.23□□□□□ -0.45
SDHA-217ENST00000514233 NMRK2Q9NPI5 230 aa12.23□□□□□ -0.45
SDHA-217ENST00000514233 CYP19A1P11511 503 aaPredicted RBP12.22□□□□□ -0.45
SDHA-217ENST00000514233 DNAJC10Q8IXB1 793 aa12.22□□□□□ -0.45
SDHA-217ENST00000514233 VSIG10Q8N0Z9 540 aa12.22□□□□□ -0.45
SDHA-217ENST00000514233 LGR6Q9HBX8 967 aa12.22□□□□□ -0.45
SDHA-217ENST00000514233 KCPQ6ZWJ8 1503 aa12.21□□□□□ -0.45
SDHA-217ENST00000514233 KDM2BQ8NHM5 1336 aa12.21□□□□□ -0.45
SDHA-217ENST00000514233 ZC3H4Q9UPT8 1303 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms