RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 KIF1BPQ96EK5 621 aa15.49■□□□□ 0.07
PRDM16-208ENST00000514189 LRRC2Q9BYS8 371 aa15.49■□□□□ 0.07
PRDM16-208ENST00000514189 ISM2Q6H9L7 571 aa15.48■□□□□ 0.07
PRDM16-208ENST00000514189 TMX3Q96JJ7 454 aa15.48■□□□□ 0.07
PRDM16-208ENST00000514189 CNNM1Q9NRU3 951 aa15.48■□□□□ 0.07
PRDM16-208ENST00000514189 TRMT1Q9NXH9 659 aaKnown RBP15.48■□□□□ 0.07
PRDM16-208ENST00000514189 SCAF11Q99590 1463 aaKnown RBP15.48■□□□□ 0.07
PRDM16-208ENST00000514189 WASLO00401 505 aaPredicted RBP15.48■□□□□ 0.07
PRDM16-208ENST00000514189 SERPINC1P01008 464 aa15.48■□□□□ 0.07
PRDM16-208ENST00000514189 SNRKQ9NRH2 765 aa15.48■□□□□ 0.07
PRDM16-208ENST00000514189 ATP5J2-PTCD1G3V325 749 aa15.48■□□□□ 0.07
PRDM16-208ENST00000514189 NUP133Q8WUM0 1156 aa15.48■□□□□ 0.07
PRDM16-208ENST00000514189 IPO7O95373 1038 aaKnown RBP15.48■□□□□ 0.07
PRDM16-208ENST00000514189 RPGRIP1LQ68CZ1 1315 aa15.47■□□□□ 0.07
PRDM16-208ENST00000514189 CABP4P57796 275 aa15.47■□□□□ 0.07
PRDM16-208ENST00000514189 TTC22Q5TAA0 569 aa15.47■□□□□ 0.07
PRDM16-208ENST00000514189 CCDC112Q8NEF3 446 aa15.47■□□□□ 0.07
PRDM16-208ENST00000514189 CPA1P15085 419 aa15.47■□□□□ 0.07
PRDM16-208ENST00000514189 PRIM1P49642 420 aaKnown RBP15.47■□□□□ 0.07
PRDM16-208ENST00000514189 NAP1L1P55209 391 aaKnown RBP15.47■□□□□ 0.07
PRDM16-208ENST00000514189 HMGN5P82970 282 aaKnown RBP15.47■□□□□ 0.07
PRDM16-208ENST00000514189 NAT10Q9H0A0 1025 aaKnown RBP15.47■□□□□ 0.07
PRDM16-208ENST00000514189 POLKQ9UBT6 870 aa15.47■□□□□ 0.07
PRDM16-208ENST00000514189 OLFM4Q6UX06 510 aa15.46■□□□□ 0.07
PRDM16-208ENST00000514189 BIN1O00499 593 aa15.46■□□□□ 0.07
PRDM16-208ENST00000514189 IDH1O75874 414 aaKnown RBP15.46■□□□□ 0.07
PRDM16-208ENST00000514189 HDAC1Q13547 482 aaPredicted RBP15.46■□□□□ 0.07
PRDM16-208ENST00000514189 CHAMP1Q96JM3 812 aa15.46■□□□□ 0.07
PRDM16-208ENST00000514189 C16orf45Q96MC5 204 aaPredicted RBP15.46■□□□□ 0.07
PRDM16-208ENST00000514189 RRAGDQ9NQL2 400 aaPredicted RBP15.46■□□□□ 0.07
PRDM16-208ENST00000514189 PRAG1Q86YV5 1406 aa15.46■□□□□ 0.07
PRDM16-208ENST00000514189 ZSCAN23Q3MJ62 389 aa15.46■□□□□ 0.06
PRDM16-208ENST00000514189 TOM1L2Q6ZVM7 507 aa15.46■□□□□ 0.06
PRDM16-208ENST00000514189 ERC1Q8IUD2 1116 aa15.46■□□□□ 0.06
PRDM16-208ENST00000514189 PATL2C9JE40 543 aaKnown RBP15.45■□□□□ 0.06
PRDM16-208ENST00000514189 VAMP4O75379 141 aa15.45■□□□□ 0.06
PRDM16-208ENST00000514189 GLRX3O76003 335 aaKnown RBP15.45■□□□□ 0.06
PRDM16-208ENST00000514189 TATP17735 454 aaPredicted RBP15.45■□□□□ 0.06
PRDM16-208ENST00000514189 TTC12Q9H892 705 aaPredicted RBP15.45■□□□□ 0.06
PRDM16-208ENST00000514189 ABCA8O94911 1581 aa15.45■□□□□ 0.06
PRDM16-208ENST00000514189 MAP3K11Q16584 847 aa15.45■□□□□ 0.06
PRDM16-208ENST00000514189 MYD88Q99836 296 aa15.45■□□□□ 0.06
PRDM16-208ENST00000514189 LETM1O95202 739 aaPredicted RBP15.45■□□□□ 0.06
PRDM16-208ENST00000514189 TTC39AQ5SRH9 613 aa15.45■□□□□ 0.06
PRDM16-208ENST00000514189 ZBTB40Q9NUA8 1239 aa15.45■□□□□ 0.06
PRDM16-208ENST00000514189 TMX1Q9H3N1 280 aa15.44■□□□□ 0.06
PRDM16-208ENST00000514189 PDE1AP54750 535 aa15.44■□□□□ 0.06
PRDM16-208ENST00000514189 DNAAF4Q8WXU2 420 aa15.44■□□□□ 0.06
PRDM16-208ENST00000514189 CEP126Q9P2H0 1117 aa15.44■□□□□ 0.06
PRDM16-208ENST00000514189 ERCC6L2Q5T890 1561 aa15.44■□□□□ 0.06
PRDM16-208ENST00000514189 AMOTL2Q9Y2J4 779 aa15.44■□□□□ 0.06
PRDM16-208ENST00000514189 SPDYE4A6NLX3 237 aa15.43■□□□□ 0.06
PRDM16-208ENST00000514189 HAND2P61296 217 aa15.43■□□□□ 0.06
PRDM16-208ENST00000514189 KLHL40Q2TBA0 621 aa15.43■□□□□ 0.06
PRDM16-208ENST00000514189 LIMCH1Q9UPQ0 1083 aa15.43■□□□□ 0.06
PRDM16-208ENST00000514189 RRP9O43818 475 aaKnown RBP15.43■□□□□ 0.06
PRDM16-208ENST00000514189 ADCY5O95622 1261 aa15.43■□□□□ 0.06
PRDM16-208ENST00000514189 CCDC158Q5M9N0 1113 aa15.43■□□□□ 0.06
PRDM16-208ENST00000514189 PA2G4Q9UQ80 394 aaKnown RBP15.43■□□□□ 0.06
PRDM16-208ENST00000514189 ERICH4A6NGS2 130 aa15.43■□□□□ 0.06
PRDM16-208ENST00000514189 CCDC57Q2TAC2 916 aa15.43■□□□□ 0.06
PRDM16-208ENST00000514189 CNPY2Q9Y2B0 182 aa15.43■□□□□ 0.06
PRDM16-208ENST00000514189 GJB2P29033 226 aa15.42■□□□□ 0.06
PRDM16-208ENST00000514189 HIP1O00291 1037 aa15.42■□□□□ 0.06
PRDM16-208ENST00000514189 ANKRD20A12PQ8NF67 263 aa15.42■□□□□ 0.06
PRDM16-208ENST00000514189 MRPL50Q8N5N7 158 aaKnown RBP15.42■□□□□ 0.06
PRDM16-208ENST00000514189 TRERF1Q96PN7 1200 aa15.42■□□□□ 0.06
PRDM16-208ENST00000514189 MAP7D2Q96T17 732 aa15.42■□□□□ 0.06
PRDM16-208ENST00000514189 TBC1D2BQ9UPU7 963 aa15.42■□□□□ 0.06
PRDM16-208ENST00000514189 STX6O43752 255 aa15.41■□□□□ 0.06
PRDM16-208ENST00000514189 IGSF3O75054 1194 aa15.41■□□□□ 0.06
PRDM16-208ENST00000514189 HSP90AA4PQ58FG1 418 aa15.41■□□□□ 0.06
PRDM16-208ENST00000514189 HOOK1Q9UJC3 728 aaKnown RBP15.41■□□□□ 0.06
PRDM16-208ENST00000514189 ACEP12821 1306 aa15.41■□□□□ 0.06
PRDM16-208ENST00000514189 G2E3Q7L622 706 aa15.41■□□□□ 0.06
PRDM16-208ENST00000514189 ABCC11Q96J66 1382 aa15.41■□□□□ 0.06
PRDM16-208ENST00000514189 RALGAPBQ86X10 1494 aa15.41■□□□□ 0.06
PRDM16-208ENST00000514189 SMC5Q8IY18 1101 aa15.41■□□□□ 0.06
PRDM16-208ENST00000514189 ZNF396Q96N95 335 aaPredicted RBP15.41■□□□□ 0.06
PRDM16-208ENST00000514189 ZHX1Q9UKY1 873 aaPredicted RBP15.41■□□□□ 0.06
PRDM16-208ENST00000514189 SLC39A6Q13433 755 aa15.41■□□□□ 0.06
PRDM16-208ENST00000514189 THEMISQ8N1K5 641 aaPredicted RBP15.41■□□□□ 0.06
PRDM16-208ENST00000514189 ZBTB3Q9H5J0 574 aa15.41■□□□□ 0.06
PRDM16-208ENST00000514189 ABCF2Q9UG63 623 aa15.41■□□□□ 0.06
PRDM16-208ENST00000514189 PPP6R1Q9UPN7 881 aa15.41■□□□□ 0.06
PRDM16-208ENST00000514189 PRDM11Q9NQV5 511 aa15.4■□□□□ 0.06
PRDM16-208ENST00000514189 ANKRD1Q15327 319 aa15.4■□□□□ 0.06
PRDM16-208ENST00000514189 CCDC144CPQ8IYA2 1237 aa15.4■□□□□ 0.06
PRDM16-208ENST00000514189 KDM2BQ8NHM5 1336 aa15.4■□□□□ 0.06
PRDM16-208ENST00000514189 POLR3DP05423 398 aaPredicted RBP15.4■□□□□ 0.06
PRDM16-208ENST00000514189 UBE3BQ7Z3V4 1068 aa15.4■□□□□ 0.06
PRDM16-208ENST00000514189 PDCL2Q8N4E4 241 aa15.4■□□□□ 0.06
PRDM16-208ENST00000514189 MAP3K2Q9Y2U5 619 aa15.4■□□□□ 0.06
PRDM16-208ENST00000514189 DDX46Q7L014 1031 aaKnown RBP15.39■□□□□ 0.05
PRDM16-208ENST00000514189 TMX4Q9H1E5 349 aaPredicted RBP15.39■□□□□ 0.05
PRDM16-208ENST00000514189 KLHL10Q6JEL2 608 aa15.39■□□□□ 0.05
PRDM16-208ENST00000514189 FAM173BQ6P4H8 233 aa15.39■□□□□ 0.05
PRDM16-208ENST00000514189 PLEKHM2Q8IWE5 1019 aa15.39■□□□□ 0.05
PRDM16-208ENST00000514189 RHPN1Q8TCX5 695 aa15.39■□□□□ 0.05
PRDM16-208ENST00000514189 ARGLU1Q9NWB6 273 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms