RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 MAP7D1Q3KQU3 841 aa6.27□□□□□ -1.41
SGCB-203ENST00000514133 TSGA10IPQ3SY00 556 aa6.27□□□□□ -1.41
SGCB-203ENST00000514133 RNF20Q5VTR2 975 aa6.27□□□□□ -1.41
SGCB-203ENST00000514133 DZIP3Q86Y13 1208 aaKnown RBP6.27□□□□□ -1.41
SGCB-203ENST00000514133 OCSTAMPQ9BR26 566 aa6.27□□□□□ -1.41
SGCB-203ENST00000514133 DNAAF2Q9NVR5 837 aaKnown RBP6.27□□□□□ -1.41
SGCB-203ENST00000514133 BMP1P13497 986 aa6.26□□□□□ -1.41
SGCB-203ENST00000514133 ERCC3P19447 782 aa6.26□□□□□ -1.41
SGCB-203ENST00000514133 ATP1A2P50993 1020 aa6.26□□□□□ -1.41
SGCB-203ENST00000514133 MARSP56192 900 aaKnown RBP6.26□□□□□ -1.41
SGCB-203ENST00000514133 CLDN10P78369 228 aa6.26□□□□□ -1.41
SGCB-203ENST00000514133 SWI5Q1ZZU3 235 aa6.26□□□□□ -1.41
SGCB-203ENST00000514133 PPP1R26Q5T8A7 1209 aaPredicted RBP6.26□□□□□ -1.41
SGCB-203ENST00000514133 DNAJC14Q6Y2X3 702 aaPredicted RBP6.26□□□□□ -1.41
SGCB-203ENST00000514133 TRIM50Q86XT4 487 aa6.26□□□□□ -1.41
SGCB-203ENST00000514133 LINC00528Q8N1L1 170 aa6.26□□□□□ -1.41
SGCB-203ENST00000514133 NOD1Q9Y239 953 aa6.26□□□□□ -1.41
SGCB-203ENST00000514133 ESPNB1AK53 854 aa6.25□□□□□ -1.41
SGCB-203ENST00000514133 INSM1Q01101 510 aaPredicted RBP6.25□□□□□ -1.41
SGCB-203ENST00000514133 PURBQ96QR8 312 aaKnown RBP6.25□□□□□ -1.41
SGCB-203ENST00000514133 ZFAND3Q9H8U3 227 aa6.25□□□□□ -1.41
SGCB-203ENST00000514133 RBM19Q9Y4C8 960 aaKnown RBP6.25□□□□□ -1.41
SGCB-203ENST00000514133 PRMT3O60678 531 aa6.24□□□□□ -1.41
SGCB-203ENST00000514133 ABL1P00519 1130 aa6.24□□□□□ -1.41
SGCB-203ENST00000514133 BMP2P12643 396 aa6.24□□□□□ -1.41
SGCB-203ENST00000514133 OXLD1Q5BKU9 147 aa6.24□□□□□ -1.41
SGCB-203ENST00000514133 INTS6LQ5JSJ4 861 aaKnown RBP6.24□□□□□ -1.41
SGCB-203ENST00000514133 IRF7Q92985 503 aa6.24□□□□□ -1.41
SGCB-203ENST00000514133 MRRFQ96E11 262 aaKnown RBP6.24□□□□□ -1.41
SGCB-203ENST00000514133 BCL2L13Q9BXK5 485 aa6.24□□□□□ -1.41
SGCB-203ENST00000514133 USP35Q9P2H5 1018 aa6.24□□□□□ -1.41
SGCB-203ENST00000514133 DOLKQ9UPQ8 538 aa6.24□□□□□ -1.41
SGCB-203ENST00000514133 SPINT1O43278 529 aa6.23□□□□□ -1.41
SGCB-203ENST00000514133 MAN1A2O60476 641 aa6.23□□□□□ -1.41
SGCB-203ENST00000514133 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.23□□□□□ -1.41
SGCB-203ENST00000514133 LARGE2Q8N3Y3 721 aa6.23□□□□□ -1.41
SGCB-203ENST00000514133 SIRT1Q96EB6 747 aa6.23□□□□□ -1.41
SGCB-203ENST00000514133 CHIC2Q9UKJ5 165 aa6.23□□□□□ -1.41
SGCB-203ENST00000514133 SOS2Q07890 1332 aaPredicted RBP6.23□□□□□ -1.41
SGCB-203ENST00000514133 H3BM21 787 aa6.22□□□□□ -1.41
SGCB-203ENST00000514133 GTF2IP78347 998 aa6.22□□□□□ -1.41
SGCB-203ENST00000514133 NOM1Q5C9Z4 860 aaKnown RBP6.22□□□□□ -1.41
SGCB-203ENST00000514133 PRIMPOLQ96LW4 560 aa6.22□□□□□ -1.41
SGCB-203ENST00000514133 KIAA1024Q9UPX6 916 aa6.22□□□□□ -1.41
SGCB-203ENST00000514133 ANKRD33BA6NCL7 494 aa6.21□□□□□ -1.42
SGCB-203ENST00000514133 ZBTB7BO15156 539 aaPredicted RBP6.21□□□□□ -1.42
SGCB-203ENST00000514133 LGR5O75473 907 aa6.21□□□□□ -1.42
SGCB-203ENST00000514133 VSIG8P0DPA2 414 aa6.21□□□□□ -1.42
SGCB-203ENST00000514133 ZNF16P17020 682 aaPredicted RBP6.21□□□□□ -1.42
SGCB-203ENST00000514133 SEC13P55735 322 aa6.21□□□□□ -1.42
SGCB-203ENST00000514133 CCDC102BQ68D86 513 aa6.21□□□□□ -1.42
SGCB-203ENST00000514133 SIX5Q8N196 739 aa6.21□□□□□ -1.42
SGCB-203ENST00000514133 GIPC2Q8TF65 315 aa6.21□□□□□ -1.42
SGCB-203ENST00000514133 CCDC85AQ96PX6 553 aaPredicted RBP6.21□□□□□ -1.42
SGCB-203ENST00000514133 HINFPQ9BQA5 517 aa6.21□□□□□ -1.42
SGCB-203ENST00000514133 ANO2Q9NQ90 1003 aa6.21□□□□□ -1.42
SGCB-203ENST00000514133 KIAA1522Q9P206 1035 aaPredicted RBP6.21□□□□□ -1.42
SGCB-203ENST00000514133 TTLL8A6PVC2 850 aa6.2□□□□□ -1.42
SGCB-203ENST00000514133 SFI1A8K8P3 1242 aa6.2□□□□□ -1.42
SGCB-203ENST00000514133 GIGYF1O75420 1035 aaPredicted RBP6.2□□□□□ -1.42
SGCB-203ENST00000514133 PSME1Q06323 249 aa6.2□□□□□ -1.42
SGCB-203ENST00000514133 C1orf216Q8TAB5 229 aa6.2□□□□□ -1.42
SGCB-203ENST00000514133 FAM181BA6NEQ2 426 aa6.19□□□□□ -1.42
SGCB-203ENST00000514133 H3BRB1 525 aa6.19□□□□□ -1.42
SGCB-203ENST00000514133 DKK1O94907 266 aa6.19□□□□□ -1.42
SGCB-203ENST00000514133 ADH1AP07327 375 aa6.19□□□□□ -1.42
SGCB-203ENST00000514133 ZNF211Q13398 564 aaPredicted RBP6.19□□□□□ -1.42
SGCB-203ENST00000514133 C6orf118Q5T5N4 469 aa6.19□□□□□ -1.42
SGCB-203ENST00000514133 TPCN2Q8NHX9 752 aa6.19□□□□□ -1.42
SGCB-203ENST00000514133 TUT1Q9H6E5 874 aaKnown RBP6.19□□□□□ -1.42
SGCB-203ENST00000514133 CXXC1Q9P0U4 656 aaPredicted RBP6.19□□□□□ -1.42
SGCB-203ENST00000514133 STK17AQ9UEE5 414 aa6.19□□□□□ -1.42
SGCB-203ENST00000514133 ERVH48-1M5A8F1 160 aa6.18□□□□□ -1.42
SGCB-203ENST00000514133 GPC1P35052 558 aa6.18□□□□□ -1.42
SGCB-203ENST00000514133 OCLNQ16625 522 aa6.18□□□□□ -1.42
SGCB-203ENST00000514133 ZNF326Q5BKZ1 582 aaKnown RBP6.18□□□□□ -1.42
SGCB-203ENST00000514133 TAS1R3Q7RTX0 852 aa6.18□□□□□ -1.42
SGCB-203ENST00000514133 GLYCTKQ8IVS8 523 aa6.18□□□□□ -1.42
SGCB-203ENST00000514133 IGSF5Q9NSI5 407 aa6.18□□□□□ -1.42
SGCB-203ENST00000514133 LILRA1O75019 489 aa6.17□□□□□ -1.42
SGCB-203ENST00000514133 MAPK1P28482 360 aa6.17□□□□□ -1.42
SGCB-203ENST00000514133 USP4Q13107 963 aa6.17□□□□□ -1.42
SGCB-203ENST00000514133 NPAS4Q8IUM7 802 aa6.17□□□□□ -1.42
SGCB-203ENST00000514133 ZNF784Q8NCA9 323 aaPredicted RBP6.17□□□□□ -1.42
SGCB-203ENST00000514133 MKNK1Q9BUB5 465 aa6.17□□□□□ -1.42
SGCB-203ENST00000514133 EGFL7Q9UHF1 273 aa6.17□□□□□ -1.42
SGCB-203ENST00000514133 PCDHGA11Q9Y5H2 935 aa6.17□□□□□ -1.42
SGCB-203ENST00000514133 ICMTO60725 284 aa6.16□□□□□ -1.42
SGCB-203ENST00000514133 PTGIRP43119 386 aa6.16□□□□□ -1.42
SGCB-203ENST00000514133 ERVK-9P63128 1117 aa6.16□□□□□ -1.42
SGCB-203ENST00000514133 GTF3C2Q8WUA4 911 aaPredicted RBP6.16□□□□□ -1.42
SGCB-203ENST00000514133 ESF1Q9H501 851 aaKnown RBP6.16□□□□□ -1.42
SGCB-203ENST00000514133 PCDHB11Q9Y5F2 797 aa6.16□□□□□ -1.42
SGCB-203ENST00000514133 CBLBQ13191 982 aa6.15□□□□□ -1.42
SGCB-203ENST00000514133 CC2D2BQ6DHV5 1058 aa6.15□□□□□ -1.42
SGCB-203ENST00000514133 CYP2U1Q7Z449 544 aa6.15□□□□□ -1.42
SGCB-203ENST00000514133 NANOS1Q8WY41 292 aaKnown RBP6.15□□□□□ -1.42
SGCB-203ENST00000514133 GMCL1Q96IK5 515 aa6.15□□□□□ -1.42
SGCB-203ENST00000514133 SEPT3Q9UH03 358 aa6.15□□□□□ -1.42
SGCB-203ENST00000514133 DNMT3LQ9UJW3 386 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms