RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	ATAD2	Q6PL18	1390 aa		7.96	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	ARID5B	Q14865	1188 aa		7.95	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	EAPP	Q56P03	285 aa	Predicted RBP	7.95	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	OSBPL3	Q9H4L5	887 aa		7.95	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	7.95	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	STAU1	O95793	577 aa	Known RBP	7.94	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	NPR3	P17342	541 aa		7.94	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	SKOR1	P84550	965 aa		7.94	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	TAGLN	Q01995	201 aa	Known RBP	7.94	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	DHX9	Q08211	1270 aa	Known RBP	7.94	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	EHBP1	Q8NDI1	1231 aa		7.94	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	CHMP7	Q8WUX9	453 aa	Predicted RBP	7.94	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	7.94	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	CYLD	Q9NQC7	956 aa		7.94	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	SERTAD1	Q9UHV2	236 aa		7.94	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	NDUFB5	O43674	189 aa		7.93	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	INHA	P05111	366 aa		7.93	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	FSHR	P23945	695 aa		7.93	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	TMPRSS4	Q9NRS4	437 aa		7.93	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	MPST	P25325	297 aa		7.92	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	EPHA4	P54764	986 aa		7.92	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	C16orf46	Q6P387	395 aa		7.92	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	CYP2U1	Q7Z449	544 aa		7.92	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	ANKLE1	Q8NAG6	615 aa		7.92	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	CDK15	Q96Q40	435 aa		7.92	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	RBCK1	Q9BYM8	510 aa		7.92	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	ETNK1	Q9HBU6	452 aa		7.92	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	RNF223	E7ERA6	249 aa		7.91	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	PPP1R12B	O60237	982 aa	Predicted RBP	7.91	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	GGCX	P38435	758 aa		7.91	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	ESCO1	Q5FWF5	840 aa		7.91	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	ZNF784	Q8NCA9	323 aa	Predicted RBP	7.91	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	BRPF3	Q9ULD4	1205 aa		7.91	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	RECK	O95980	971 aa		7.9	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	GNRH1	P01148	92 aa		7.9	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	MYT1	Q01538	1121 aa		7.9	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	PLA2G2C	Q5R387	149 aa		7.9	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	TMC7	Q7Z402	723 aa		7.9	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	TMC1	Q8TDI8	760 aa		7.9	□□□□□ -1.14
CALCOCO2-222	ENST00000514006	SLC4A9	Q96Q91	983 aa		7.9	□□□□□ -1.14
CALCOCO2-222	ENST00000514006		A0A1W2PRU2	124 aa		7.89	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	P4HB	P07237	508 aa	Known RBP	7.89	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	RPIA	P49247	311 aa		7.89	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	KCNC4	Q03721	635 aa		7.89	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	AAMP	Q13685	434 aa		7.89	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	TSNAXIP1	Q2TAA8	658 aa		7.89	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	ALKBH2	Q6NS38	261 aa		7.89	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	SLC9A9	Q8IVB4	645 aa		7.89	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	CITED4	Q96RK1	184 aa		7.89	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	SAP130	Q9H0E3	1048 aa		7.89	□□□□□ -1.15
CALCOCO2-222	ENST00000514006		A6NJY4	79 aa		7.88	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	GRM5	P41594	1212 aa		7.88	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	FOXK2	Q01167	660 aa		7.88	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	TBCEL	Q5QJ74	424 aa		7.88	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	RC3H1	Q5TC82	1133 aa	Known RBP	7.88	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	CCDC116	Q8IYX3	515 aa		7.88	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	STAG2	Q8N3U4	1231 aa		7.88	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	SCHIP1	Q9P0W5	487 aa	Predicted RBP	7.88	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	CHMP3	Q9Y3E7	222 aa		7.88	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	TREH	O43280	583 aa		7.87	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	LILRA1	O75019	489 aa		7.87	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	EIF1AX	P47813	144 aa	Known RBP	7.87	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	FGD1	P98174	961 aa		7.87	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	7.87	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	MPND	Q8N594	471 aa		7.87	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	C8orf37	Q96NL8	207 aa		7.87	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.87	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	STIM2	Q9P246	746 aa		7.87	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	TLL2	Q9Y6L7	1015 aa		7.87	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	CD2BP2	O95400	341 aa	Known RBP	7.86	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	ADH1C	P00326	375 aa		7.86	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	SMTN	P53814	917 aa		7.86	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	PSMA6	P60900	246 aa	Known RBP	7.86	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	FMR1	Q06787	632 aa	Known RBP eCLIP	7.86	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	NR5A1	Q13285	461 aa		7.86	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	MTFR1	Q15390	333 aa		7.86	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	COX20	Q5RI15	118 aa		7.86	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	DMRTB1	Q96MA1	342 aa		7.86	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	RAB6B	Q9NRW1	208 aa		7.86	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	FZD6	O60353	706 aa		7.85	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	ABTB2	Q8N961	1025 aa		7.85	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	PRKD2	Q9BZL6	878 aa		7.85	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	ARHGEF10L	Q9HCE6	1279 aa		7.85	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	CCDC87	Q9NVE4	849 aa		7.85	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	PGPEP1	Q9NXJ5	209 aa		7.85	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	TNFRSF10B	O14763	440 aa		7.84	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	MAPK8	P45983	427 aa		7.84	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	ZC3H6	P61129	1189 aa	Known RBP	7.84	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	XPC	Q01831	940 aa	Predicted RBP	7.84	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	PLCB3	Q01970	1234 aa		7.84	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	PDE3B	Q13370	1112 aa		7.84	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	MRPL58	Q14197	206 aa	Known RBP	7.84	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	RNF166	Q96A37	237 aa	Predicted RBP	7.84	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	BACH2	Q9BYV9	841 aa		7.84	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	QTRT2	Q9H974	415 aa	Known RBP	7.84	□□□□□ -1.15
CALCOCO2-222	ENST00000514006	ITGBL1	O95965	494 aa	Predicted RBP	7.83	□□□□□ -1.16
CALCOCO2-222	ENST00000514006	LDHB	P07195	334 aa	Known RBP	7.83	□□□□□ -1.16
CALCOCO2-222	ENST00000514006	ADD1	P35611	737 aa	Known RBP	7.83	□□□□□ -1.16
CALCOCO2-222	ENST00000514006	ITGAE	P38570	1179 aa		7.83	□□□□□ -1.16
CALCOCO2-222	ENST00000514006	EHHADH	Q08426	723 aa		7.83	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 751 ms