RNA–Protein interactions for RNA: ENST00000513946.1

PROM1-216, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-216ENST00000513946 INHAP05111 366 aa6.96□□□□□ -1.3
PROM1-216ENST00000513946 SRSF11Q05519 484 aaKnown RBP6.96□□□□□ -1.3
PROM1-216ENST00000513946 ESCO1Q5FWF5 840 aa6.96□□□□□ -1.3
PROM1-216ENST00000513946 LYPD4Q6UWN0 246 aa6.96□□□□□ -1.3
PROM1-216ENST00000513946 RIPOR1Q6ZS17 1223 aa6.96□□□□□ -1.3
PROM1-216ENST00000513946 ADAMTS8Q9UP79 889 aa6.96□□□□□ -1.3
PROM1-216ENST00000513946 POM121CA8CG34 1229 aa6.95□□□□□ -1.3
PROM1-216ENST00000513946 H7C1W4 665 aa6.95□□□□□ -1.3
PROM1-216ENST00000513946 ADAMTS2O95450 1211 aa6.95□□□□□ -1.3
PROM1-216ENST00000513946 PHKA2P46019 1235 aa6.95□□□□□ -1.3
PROM1-216ENST00000513946 ZNF295-AS1Q8N0V1 137 aa6.95□□□□□ -1.3
PROM1-216ENST00000513946 GTPBP3Q969Y2 492 aaKnown RBP6.95□□□□□ -1.3
PROM1-216ENST00000513946 SLC4A9Q96Q91 983 aa6.95□□□□□ -1.3
PROM1-216ENST00000513946 GDF10P55107 478 aa6.94□□□□□ -1.3
PROM1-216ENST00000513946 KCNMA1Q12791 1236 aa6.94□□□□□ -1.3
PROM1-216ENST00000513946 FNBP4Q8N3X1 1017 aaPredicted RBP6.94□□□□□ -1.3
PROM1-216ENST00000513946 LZTS3O60299 673 aaPredicted RBP6.93□□□□□ -1.3
PROM1-216ENST00000513946 CELA2BP08218 269 aaPredicted RBP6.93□□□□□ -1.3
PROM1-216ENST00000513946 SKIP12755 728 aa6.93□□□□□ -1.3
PROM1-216ENST00000513946 SMTNP53814 917 aa6.93□□□□□ -1.3
PROM1-216ENST00000513946 MTFR1Q15390 333 aa6.93□□□□□ -1.3
PROM1-216ENST00000513946 TMEM214Q6NUQ4 689 aaKnown RBP6.93□□□□□ -1.3
PROM1-216ENST00000513946 NFATC2IPQ8NCF5 419 aa6.93□□□□□ -1.3
PROM1-216ENST00000513946 RHBDD1Q8TEB9 315 aa6.93□□□□□ -1.3
PROM1-216ENST00000513946 MBIPQ9NS73 344 aa6.93□□□□□ -1.3
PROM1-216ENST00000513946 A0A1B0GTH6 734 aa6.92□□□□□ -1.3
PROM1-216ENST00000513946 ZBTB7BO15156 539 aaPredicted RBP6.92□□□□□ -1.3
PROM1-216ENST00000513946 UBTFP17480 764 aaKnown RBP6.92□□□□□ -1.3
PROM1-216ENST00000513946 MSX1P28360 303 aa6.92□□□□□ -1.3
PROM1-216ENST00000513946 NUCKS1Q9H1E3 243 aaKnown RBP6.92□□□□□ -1.3
PROM1-216ENST00000513946 IQSEC3Q9UPP2 1182 aaPredicted RBP6.92□□□□□ -1.3
PROM1-216ENST00000513946 CDK2AP1O14519 115 aa6.91□□□□□ -1.3
PROM1-216ENST00000513946 RAD21O60216 631 aa6.91□□□□□ -1.3
PROM1-216ENST00000513946 TLR1Q15399 786 aa6.91□□□□□ -1.3
PROM1-216ENST00000513946 GNASQ5JWF2 1037 aa6.91□□□□□ -1.3
PROM1-216ENST00000513946 HDGFL1Q5TGJ6 251 aa6.91□□□□□ -1.3
PROM1-216ENST00000513946 UCN2Q96RP3 112 aa6.91□□□□□ -1.3
PROM1-216ENST00000513946 CFHR5Q9BXR6 569 aa6.91□□□□□ -1.3
PROM1-216ENST00000513946 USP3Q9Y6I4 520 aa6.91□□□□□ -1.3
PROM1-216ENST00000513946 IGF1RP08069 1367 aa6.91□□□□□ -1.3
PROM1-216ENST00000513946 NCOA4Q13772 614 aa6.9□□□□□ -1.3
PROM1-216ENST00000513946 FOXR1Q6PIV2 292 aa6.9□□□□□ -1.3
PROM1-216ENST00000513946 SVOPQ8N4V2 548 aa6.9□□□□□ -1.3
PROM1-216ENST00000513946 CLUAP1Q96AJ1 413 aa6.9□□□□□ -1.3
PROM1-216ENST00000513946 GPAMQ9HCL2 828 aa6.9□□□□□ -1.3
PROM1-216ENST00000513946 NDFIP2Q9NV92 336 aa6.9□□□□□ -1.3
PROM1-216ENST00000513946 SERTAD1Q9UHV2 236 aa6.9□□□□□ -1.3
PROM1-216ENST00000513946 A6NJY4 79 aa6.89□□□□□ -1.31
PROM1-216ENST00000513946 LBRQ14739 615 aaKnown RBP6.89□□□□□ -1.31
PROM1-216ENST00000513946 EML3Q32P44 896 aa6.89□□□□□ -1.31
PROM1-216ENST00000513946 TBC1D9Q6ZT07 1266 aa6.89□□□□□ -1.31
PROM1-216ENST00000513946 WWC1Q8IX03 1113 aa6.89□□□□□ -1.31
PROM1-216ENST00000513946 ACDQ96AP0 544 aa6.89□□□□□ -1.31
PROM1-216ENST00000513946 CRISPLD1Q9H336 500 aa6.89□□□□□ -1.31
PROM1-216ENST00000513946 RUBCNLQ9H714 662 aa6.89□□□□□ -1.31
PROM1-216ENST00000513946 NOD1Q9Y239 953 aa6.89□□□□□ -1.31
PROM1-216ENST00000513946 DEPDC4Q8N2C3 294 aa6.88□□□□□ -1.31
PROM1-216ENST00000513946 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.88□□□□□ -1.31
PROM1-216ENST00000513946 DNAAF2Q9NVR5 837 aaKnown RBP6.88□□□□□ -1.31
PROM1-216ENST00000513946 HCN2Q9UL51 889 aa6.88□□□□□ -1.31
PROM1-216ENST00000513946 USP17L5A8MUK1 530 aa6.87□□□□□ -1.31
PROM1-216ENST00000513946 GTF2E1P29083 439 aaPredicted RBP6.87□□□□□ -1.31
PROM1-216ENST00000513946 EPHA4P54764 986 aa6.87□□□□□ -1.31
PROM1-216ENST00000513946 GTF2IP78347 998 aa6.87□□□□□ -1.31
PROM1-216ENST00000513946 PLEKHM2Q8IWE5 1019 aa6.87□□□□□ -1.31
PROM1-216ENST00000513946 C7orf43Q8WVR3 580 aa6.87□□□□□ -1.31
PROM1-216ENST00000513946 TRERF1Q96PN7 1200 aa6.87□□□□□ -1.31
PROM1-216ENST00000513946 NIFKQ9BYG3 293 aaKnown RBP6.87□□□□□ -1.31
PROM1-216ENST00000513946 C2CD2LO14523 706 aa6.86□□□□□ -1.31
PROM1-216ENST00000513946 BNIP3LO60238 219 aa6.86□□□□□ -1.31
PROM1-216ENST00000513946 DKK1O94907 266 aa6.86□□□□□ -1.31
PROM1-216ENST00000513946 MX2P20592 715 aa6.86□□□□□ -1.31
PROM1-216ENST00000513946 ATP4AP20648 1035 aa6.86□□□□□ -1.31
PROM1-216ENST00000513946 PLA2G4AP47712 749 aa6.86□□□□□ -1.31
PROM1-216ENST00000513946 C1orf229Q6ZS94 237 aaPredicted RBP6.86□□□□□ -1.31
PROM1-216ENST00000513946 ZNF358Q9NW07 568 aa6.86□□□□□ -1.31
PROM1-216ENST00000513946 KIAA1024Q9UPX6 916 aa6.86□□□□□ -1.31
PROM1-216ENST00000513946 ATP9BO43861 1147 aa6.85□□□□□ -1.31
PROM1-216ENST00000513946 BCRP11274 1271 aa6.85□□□□□ -1.31
PROM1-216ENST00000513946 FOXK2Q01167 660 aa6.85□□□□□ -1.31
PROM1-216ENST00000513946 RASSF7Q02833 373 aa6.85□□□□□ -1.31
PROM1-216ENST00000513946 C1orf216Q8TAB5 229 aa6.85□□□□□ -1.31
PROM1-216ENST00000513946 KLRG1Q96E93 195 aa6.85□□□□□ -1.31
PROM1-216ENST00000513946 ZCCHC2Q9C0B9 1178 aaKnown RBP6.85□□□□□ -1.31
PROM1-216ENST00000513946 SCHIP1Q9P0W5 487 aaPredicted RBP6.85□□□□□ -1.31
PROM1-216ENST00000513946 A6NJR5 290 aa6.84□□□□□ -1.31
PROM1-216ENST00000513946 BACH1O14867 736 aa6.84□□□□□ -1.31
PROM1-216ENST00000513946 CLDN10P78369 228 aa6.84□□□□□ -1.31
PROM1-216ENST00000513946 CTBSQ01459 385 aa6.84□□□□□ -1.31
PROM1-216ENST00000513946 ZDHHC1Q8WTX9 485 aa6.84□□□□□ -1.31
PROM1-216ENST00000513946 ZIC5Q96T25 663 aa6.84□□□□□ -1.31
PROM1-216ENST00000513946 LRRC4BQ9NT99 713 aa6.84□□□□□ -1.31
PROM1-216ENST00000513946 USP17L3A6NCW0 530 aa6.83□□□□□ -1.32
PROM1-216ENST00000513946 USP17L4A6NCW7 530 aa6.83□□□□□ -1.32
PROM1-216ENST00000513946 OIP5O43482 229 aa6.83□□□□□ -1.32
PROM1-216ENST00000513946 CSB-PGBD3P0DP91 1061 aa6.83□□□□□ -1.32
PROM1-216ENST00000513946 EFHC2Q5JST6 749 aa6.83□□□□□ -1.32
PROM1-216ENST00000513946 USP17L2Q6R6M4 530 aa6.83□□□□□ -1.32
PROM1-216ENST00000513946 USP17L1Q7RTZ2 530 aa6.83□□□□□ -1.32
PROM1-216ENST00000513946 NLRP8Q86W28 1048 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms