RNA–Protein interactions for RNA: ENST00000513881.5

SNX24-211, Transcript of sorting nexin 24, humanhuman

TSL 1 (best) BASIC

Gene SNX24, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX24-211ENST00000513881 U2AF1L5P0DN76 240 aaPredicted RBP27.75■■■□□ 2.03
SNX24-211ENST00000513881 U2AF1Q01081 240 aaKnown RBP eCLIP27.75■■■□□ 2.03
SNX24-211ENST00000513881 RALBP1Q15311 655 aa27.75■■■□□ 2.03
SNX24-211ENST00000513881 ZNF831Q5JPB2 1677 aa27.75■■■□□ 2.03
SNX24-211ENST00000513881 ITPK1Q13572 414 aa27.74■■■□□ 2.03
SNX24-211ENST00000513881 AMIGO3Q86WK7 504 aa27.74■■■□□ 2.03
SNX24-211ENST00000513881 NUDCQ9Y266 331 aa27.74■■■□□ 2.03
SNX24-211ENST00000513881 RNMTO43148 476 aaKnown RBP27.73■■■□□ 2.03
SNX24-211ENST00000513881 UBR3Q6ZT12 1888 aa27.72■■■□□ 2.03
SNX24-211ENST00000513881 COL5A3P25940 1745 aaPredicted RBP27.72■■■□□ 2.03
SNX24-211ENST00000513881 PTGER2P43116 358 aa27.72■■■□□ 2.03
SNX24-211ENST00000513881 LINC00116Q8NCU8 138 aa27.72■■■□□ 2.03
SNX24-211ENST00000513881 SPON1Q9HCB6 807 aa27.72■■■□□ 2.03
SNX24-211ENST00000513881 TFCP2L1Q9NZI6 479 aa27.72■■■□□ 2.03
SNX24-211ENST00000513881 SLC52A2Q9HAB3 445 aa27.71■■■□□ 2.03
SNX24-211ENST00000513881 COL24A1Q17RW2 1714 aa27.7■■■□□ 2.03
SNX24-211ENST00000513881 SIPA1L3O60292 1781 aaPredicted RBP27.7■■■□□ 2.03
SNX24-211ENST00000513881 MAP3K5Q99683 1374 aa27.7■■■□□ 2.02
SNX24-211ENST00000513881 FCHSD2O94868 740 aa27.69■■■□□ 2.02
SNX24-211ENST00000513881 ATF5Q9Y2D1 282 aaPredicted RBP27.69■■■□□ 2.02
SNX24-211ENST00000513881 IL17REQ8NFR9 667 aa27.69■■■□□ 2.02
SNX24-211ENST00000513881 SGIP1Q9BQI5 828 aa27.69■■■□□ 2.02
SNX24-211ENST00000513881 TJP1Q07157 1748 aa27.68■■■□□ 2.02
SNX24-211ENST00000513881 ATP6V1AP38606 617 aa27.68■■■□□ 2.02
SNX24-211ENST00000513881 SMIM5Q71RC9 77 aa27.68■■■□□ 2.02
SNX24-211ENST00000513881 GAS2L2Q8NHY3 880 aa27.68■■■□□ 2.02
SNX24-211ENST00000513881 COL23A1Q86Y22 540 aaPredicted RBP27.67■■■□□ 2.02
SNX24-211ENST00000513881 MTFR1LQ9H019 292 aa27.67■■■□□ 2.02
SNX24-211ENST00000513881 MYBBP1AQ9BQG0 1328 aaKnown RBP27.67■■■□□ 2.02
SNX24-211ENST00000513881 CICQ96RK0 1608 aaPredicted RBP27.67■■■□□ 2.02
SNX24-211ENST00000513881 GNAT3A8MTJ3 354 aa27.65■■■□□ 2.02
SNX24-211ENST00000513881 RBM42Q9BTD8 480 aaKnown RBP27.65■■■□□ 2.02
SNX24-211ENST00000513881 PRKRIP1Q9H875 184 aaPredicted RBP27.65■■■□□ 2.02
SNX24-211ENST00000513881 UBR2Q8IWV8 1755 aa27.65■■■□□ 2.02
SNX24-211ENST00000513881 KCPQ6ZWJ8 1503 aa27.65■■■□□ 2.02
SNX24-211ENST00000513881 CEMIPQ8WUJ3 1361 aa27.64■■■□□ 2.02
SNX24-211ENST00000513881 PLEKHF1Q96S99 279 aa27.64■■■□□ 2.01
SNX24-211ENST00000513881 MYH14Q7Z406 1995 aaKnown RBP27.64■■■□□ 2.01
SNX24-211ENST00000513881 DLG5Q8TDM6 1919 aa27.63■■■□□ 2.01
SNX24-211ENST00000513881 ZNF316A6NFI3 1004 aaPredicted RBP27.63■■■□□ 2.01
SNX24-211ENST00000513881 PTCD1O75127 700 aaKnown RBP27.63■■■□□ 2.01
SNX24-211ENST00000513881 SLC39A6Q13433 755 aa27.63■■■□□ 2.01
SNX24-211ENST00000513881 AK7Q96M32 723 aa27.6■■■□□ 2.01
SNX24-211ENST00000513881 SLC16A10Q8TF71 515 aa27.58■■■□□ 2.01
SNX24-211ENST00000513881 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.56■■■□□ 2
SNX24-211ENST00000513881 GNPATO15228 680 aa27.56■■■□□ 2
SNX24-211ENST00000513881 PHF14O94880 888 aa27.56■■■□□ 2
SNX24-211ENST00000513881 DCTN1Q14203 1278 aa27.56■■■□□ 2
SNX24-211ENST00000513881 MCM10Q7L590 875 aa27.56■■■□□ 2
SNX24-211ENST00000513881 PPP1R1BQ9UD71 204 aaPredicted RBP27.55■■■□□ 2
SNX24-211ENST00000513881 CNTNAP4Q9C0A0 1308 aa27.54■■■□□ 2
SNX24-211ENST00000513881 GOLGB1Q14789 3259 aaKnown RBP27.54■■■□□ 2
SNX24-211ENST00000513881 UTRNP46939 3433 aa27.54■■■□□ 2
SNX24-211ENST00000513881 MSH5O43196 834 aa27.53■■■□□ 2
SNX24-211ENST00000513881 HMGB2P26583 209 aaKnown RBP27.53■■■□□ 2
SNX24-211ENST00000513881 SSFA2P28290 1259 aa27.53■■■□□ 2
SNX24-211ENST00000513881 C4AP0C0L4 1744 aa27.53■■■□□ 2
SNX24-211ENST00000513881 TEFQ10587 303 aa27.52■■■□□ 2
SNX24-211ENST00000513881 MSL1Q68DK7 614 aa27.52■■■□□ 2
SNX24-211ENST00000513881 DNAJC10Q8IXB1 793 aa27.52■■■□□ 2
SNX24-211ENST00000513881 RC3H1Q5TC82 1133 aaKnown RBP27.51■■□□□ 1.99
SNX24-211ENST00000513881 FLAD1Q8NFF5 587 aa27.51■■□□□ 1.99
SNX24-211ENST00000513881 KCNQ3O43525 872 aa27.5■■□□□ 1.99
SNX24-211ENST00000513881 CRKLP46109 303 aaKnown RBP27.5■■□□□ 1.99
SNX24-211ENST00000513881 ZNF790Q6PG37 636 aa27.49■■□□□ 1.99
SNX24-211ENST00000513881 ARXQ96QS3 562 aa27.49■■□□□ 1.99
SNX24-211ENST00000513881 INTS5Q6P9B9 1019 aaKnown RBP27.48■■□□□ 1.99
SNX24-211ENST00000513881 ZNF496Q96IT1 587 aaPredicted RBP27.48■■□□□ 1.99
SNX24-211ENST00000513881 FHDC1Q9C0D6 1143 aaPredicted RBP27.48■■□□□ 1.99
SNX24-211ENST00000513881 NFE2L2Q16236 605 aa27.48■■□□□ 1.99
SNX24-211ENST00000513881 HTATSF1O43719 755 aaKnown RBP27.47■■□□□ 1.99
SNX24-211ENST00000513881 CYP19A1P11511 503 aaPredicted RBP27.47■■□□□ 1.99
SNX24-211ENST00000513881 RTCBQ9Y3I0 505 aaKnown RBP27.47■■□□□ 1.99
SNX24-211ENST00000513881 RPS6KA4O75676 772 aa27.46■■□□□ 1.99
SNX24-211ENST00000513881 CCDC184Q52MB2 194 aa27.46■■□□□ 1.99
SNX24-211ENST00000513881 RTF1Q92541 710 aaKnown RBP27.46■■□□□ 1.99
SNX24-211ENST00000513881 THUMPD2Q9BTF0 503 aaKnown RBP27.45■■□□□ 1.99
SNX24-211ENST00000513881 ADAMTS8Q9UP79 889 aa27.45■■□□□ 1.99
SNX24-211ENST00000513881 BTBD11A6QL63 1104 aa27.44■■□□□ 1.98
SNX24-211ENST00000513881 CCDC146Q8IYE0 955 aa27.44■■□□□ 1.98
SNX24-211ENST00000513881 VSIG10Q8N0Z9 540 aa27.44■■□□□ 1.98
SNX24-211ENST00000513881 ARHGEF1Q92888 912 aaKnown RBP27.44■■□□□ 1.98
SNX24-211ENST00000513881 SYT17Q9BSW7 474 aa27.44■■□□□ 1.98
SNX24-211ENST00000513881 HEG1Q9ULI3 1381 aa27.44■■□□□ 1.98
SNX24-211ENST00000513881 MAPK8IP3Q9UPT6 1336 aa27.44■■□□□ 1.98
SNX24-211ENST00000513881 TTC5Q8N0Z6 440 aa27.43■■□□□ 1.98
SNX24-211ENST00000513881 POLD1P28340 1107 aa27.43■■□□□ 1.98
SNX24-211ENST00000513881 KDM3BQ7LBC6 1761 aa27.42■■□□□ 1.98
SNX24-211ENST00000513881 NEFMP07197 916 aa27.42■■□□□ 1.98
SNX24-211ENST00000513881 TRAPPC3LQ5T215 181 aa27.42■■□□□ 1.98
SNX24-211ENST00000513881 PNNQ9H307 717 aaKnown RBP27.41■■□□□ 1.98
SNX24-211ENST00000513881 CCDC87Q9NVE4 849 aa27.41■■□□□ 1.98
SNX24-211ENST00000513881 ADRA2BP18089 450 aa27.4■■□□□ 1.98
SNX24-211ENST00000513881 ZBTB1Q9Y2K1 713 aa27.4■■□□□ 1.98
SNX24-211ENST00000513881 MIS18AQ9NYP9 233 aa27.39■■□□□ 1.98
SNX24-211ENST00000513881 SOS1Q07889 1333 aaPredicted RBP27.39■■□□□ 1.98
SNX24-211ENST00000513881 PRAMEF22A3QJZ6 481 aa27.39■■□□□ 1.97
SNX24-211ENST00000513881 TMPOP42166 694 aaKnown RBP27.39■■□□□ 1.97
SNX24-211ENST00000513881 WDR43Q15061 677 aaKnown RBP eCLIP27.39■■□□□ 1.97
SNX24-211ENST00000513881 RRP7AQ9Y3A4 280 aaKnown RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms