RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 TATP17735 454 aaPredicted RBP12.73□□□□□ -0.37
CAST-239ENST00000513666 SSFA2P28290 1259 aa12.73□□□□□ -0.37
CAST-239ENST00000513666 SIN3AQ96ST3 1273 aa12.73□□□□□ -0.37
CAST-239ENST00000513666 KIAA1551Q9HCM1 1747 aa12.73□□□□□ -0.37
CAST-239ENST00000513666 KIF13BQ9NQT8 1826 aa12.73□□□□□ -0.37
CAST-239ENST00000513666 SMIM5Q71RC9 77 aa12.72□□□□□ -0.37
CAST-239ENST00000513666 SMG6Q86US8 1419 aaKnown RBP12.72□□□□□ -0.37
CAST-239ENST00000513666 MAP2P11137 1827 aaKnown RBP12.72□□□□□ -0.37
CAST-239ENST00000513666 PXDNLA1KZ92 1463 aa12.72□□□□□ -0.37
CAST-239ENST00000513666 CARD11Q9BXL7 1154 aa12.72□□□□□ -0.37
CAST-239ENST00000513666 CYP27B1O15528 508 aa12.71□□□□□ -0.38
CAST-239ENST00000513666 COL13A1Q5TAT6 717 aaPredicted RBP12.71□□□□□ -0.38
CAST-239ENST00000513666 RBM46Q8TBY0 533 aaKnown RBP12.71□□□□□ -0.38
CAST-239ENST00000513666 NMRK2Q9NPI5 230 aa12.71□□□□□ -0.38
CAST-239ENST00000513666 N4BP2Q86UW6 1770 aaPredicted RBP12.7□□□□□ -0.38
CAST-239ENST00000513666 RRS1Q15050 365 aaKnown RBP12.7□□□□□ -0.38
CAST-239ENST00000513666 JMYQ8N9B5 988 aa12.7□□□□□ -0.38
CAST-239ENST00000513666 KLRG1Q96E93 195 aa12.7□□□□□ -0.38
CAST-239ENST00000513666 CLEC11AQ9Y240 323 aa12.7□□□□□ -0.38
CAST-239ENST00000513666 PKD1L3Q7Z443 1732 aa12.69□□□□□ -0.38
CAST-239ENST00000513666 TGFB2P61812 414 aa12.69□□□□□ -0.38
CAST-239ENST00000513666 NEUROD1Q13562 356 aa12.69□□□□□ -0.38
CAST-239ENST00000513666 LINC00116Q8NCU8 138 aa12.69□□□□□ -0.38
CAST-239ENST00000513666 PIGBQ92521 554 aa12.69□□□□□ -0.38
CAST-239ENST00000513666 INSRP06213 1382 aa12.68□□□□□ -0.38
CAST-239ENST00000513666 LOC102724428A0A0B4J2F2 783 aa12.68□□□□□ -0.38
CAST-239ENST00000513666 MMP10P09238 476 aa12.68□□□□□ -0.38
CAST-239ENST00000513666 SIK1P57059 783 aa12.68□□□□□ -0.38
CAST-239ENST00000513666 BCS1LQ9Y276 419 aa12.68□□□□□ -0.38
CAST-239ENST00000513666 GNPATO15228 680 aa12.67□□□□□ -0.38
CAST-239ENST00000513666 ARHGAP27Q6ZUM4 889 aa12.67□□□□□ -0.38
CAST-239ENST00000513666 C10orf71Q711Q0 1435 aa12.67□□□□□ -0.38
CAST-239ENST00000513666 BRCA1P38398 1863 aaKnown RBP12.67□□□□□ -0.38
CAST-239ENST00000513666 A0A0G2JLW4 131 aa12.67□□□□□ -0.38
CAST-239ENST00000513666 HTRA3P83110 453 aa12.67□□□□□ -0.38
CAST-239ENST00000513666 FSTL1Q12841 308 aa12.67□□□□□ -0.38
CAST-239ENST00000513666 NKX1-1Q15270 411 aaPredicted RBP12.67□□□□□ -0.38
CAST-239ENST00000513666 PLEKHG2Q9H7P9 1386 aa12.66□□□□□ -0.38
CAST-239ENST00000513666 ITPK1Q13572 414 aa12.66□□□□□ -0.38
CAST-239ENST00000513666 HSP90AB2PQ58FF8 381 aa12.66□□□□□ -0.38
CAST-239ENST00000513666 C16orf71Q8IYS4 520 aaPredicted RBP12.66□□□□□ -0.38
CAST-239ENST00000513666 FLT4P35916 1363 aa12.65□□□□□ -0.38
CAST-239ENST00000513666 KIF24Q5T7B8 1368 aa12.65□□□□□ -0.38
CAST-239ENST00000513666 FYB1O15117 783 aa12.65□□□□□ -0.38
CAST-239ENST00000513666 PRELPP51888 382 aa12.65□□□□□ -0.38
CAST-239ENST00000513666 TNS4Q8IZW8 715 aa12.65□□□□□ -0.38
CAST-239ENST00000513666 ARFGEF1Q9Y6D6 1849 aa12.65□□□□□ -0.39
CAST-239ENST00000513666 NCAPD2Q15021 1401 aa12.64□□□□□ -0.39
CAST-239ENST00000513666 FCHSD2O94868 740 aa12.64□□□□□ -0.39
CAST-239ENST00000513666 DPEP1P16444 411 aa12.64□□□□□ -0.39
CAST-239ENST00000513666 ATP6V1AP38606 617 aa12.64□□□□□ -0.39
CAST-239ENST00000513666 C9orf131Q5VYM1 1079 aa12.64□□□□□ -0.39
CAST-239ENST00000513666 NLGN1Q8N2Q7 840 aa12.64□□□□□ -0.39
CAST-239ENST00000513666 TESK2Q96S53 571 aa12.64□□□□□ -0.39
CAST-239ENST00000513666 GGNBP2Q9H3C7 697 aa12.64□□□□□ -0.39
CAST-239ENST00000513666 C4AP0C0L4 1744 aa12.64□□□□□ -0.39
CAST-239ENST00000513666 TMOD3Q9NYL9 352 aa12.63□□□□□ -0.39
CAST-239ENST00000513666 ASAP1Q9ULH1 1129 aa12.63□□□□□ -0.39
CAST-239ENST00000513666 TMF1P82094 1093 aa12.62□□□□□ -0.39
CAST-239ENST00000513666 CCDC87Q9NVE4 849 aa12.62□□□□□ -0.39
CAST-239ENST00000513666 SPG7Q9UQ90 795 aa12.62□□□□□ -0.39
CAST-239ENST00000513666 KDM2BQ8NHM5 1336 aa12.62□□□□□ -0.39
CAST-239ENST00000513666 TNRC6CQ9HCJ0 1690 aaKnown RBP12.62□□□□□ -0.39
CAST-239ENST00000513666 KCPQ6ZWJ8 1503 aa12.62□□□□□ -0.39
CAST-239ENST00000513666 KIF20BQ96Q89 1820 aa12.62□□□□□ -0.39
CAST-239ENST00000513666 TRAPPC3LQ5T215 181 aa12.62□□□□□ -0.39
CAST-239ENST00000513666 RTCBQ9Y3I0 505 aaKnown RBP12.62□□□□□ -0.39
CAST-239ENST00000513666 SLC24A1O60721 1099 aa12.61□□□□□ -0.39
CAST-239ENST00000513666 PRKAR2AP13861 404 aaKnown RBP12.61□□□□□ -0.39
CAST-239ENST00000513666 KCNA3P22001 575 aa12.61□□□□□ -0.39
CAST-239ENST00000513666 ZNF831Q5JPB2 1677 aa12.61□□□□□ -0.39
CAST-239ENST00000513666 KDRP35968 1356 aa12.61□□□□□ -0.39
CAST-239ENST00000513666 ST20-MTHFSA0A0A6YYL1 179 aa12.6□□□□□ -0.39
CAST-239ENST00000513666 ATG3Q9NT62 314 aa12.6□□□□□ -0.39
CAST-239ENST00000513666 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.6□□□□□ -0.393e-7■■■□□ 17.3
CAST-239ENST00000513666 GYS1P13807 737 aa12.59□□□□□ -0.39
CAST-239ENST00000513666 ARHGEF1Q92888 912 aaKnown RBP12.59□□□□□ -0.39
CAST-239ENST00000513666 DCAF5Q96JK2 942 aa12.59□□□□□ -0.39
CAST-239ENST00000513666 RRAGCQ9HB90 399 aa12.59□□□□□ -0.39
CAST-239ENST00000513666 PARP3Q9Y6F1 533 aa12.59□□□□□ -0.39
CAST-239ENST00000513666 COL5A3P25940 1745 aaPredicted RBP12.59□□□□□ -0.39
CAST-239ENST00000513666 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
CAST-239ENST00000513666 RC3H1Q5TC82 1133 aaKnown RBP12.58□□□□□ -0.4
CAST-239ENST00000513666 SMC1BQ8NDV3 1235 aa12.58□□□□□ -0.4
CAST-239ENST00000513666 RNF181Q9P0P0 153 aa12.58□□□□□ -0.4
CAST-239ENST00000513666 PIM2Q9P1W9 311 aa12.58□□□□□ -0.4
CAST-239ENST00000513666 EMILIN1Q9Y6C2 1016 aa12.58□□□□□ -0.4
CAST-239ENST00000513666 TONSLQ96HA7 1378 aa12.58□□□□□ -0.4
CAST-239ENST00000513666 SBF1O95248 1867 aa12.58□□□□□ -0.4
CAST-239ENST00000513666 ANKRD26Q9UPS8 1709 aa12.58□□□□□ -0.4
CAST-239ENST00000513666 CNTNAP4Q9C0A0 1308 aa12.57□□□□□ -0.4
CAST-239ENST00000513666 PHKG2P15735 406 aa12.57□□□□□ -0.4
CAST-239ENST00000513666 DALRD3Q5D0E6 543 aaKnown RBP12.57□□□□□ -0.4
CAST-239ENST00000513666 IFNL2Q8IZJ0 200 aa12.57□□□□□ -0.4
CAST-239ENST00000513666 SLC4A9Q96Q91 983 aa12.57□□□□□ -0.4
CAST-239ENST00000513666 PCNTO95613 3336 aa12.57□□□□□ -0.4
CAST-239ENST00000513666 RPS6KA4O75676 772 aa12.57□□□□□ -0.4
CAST-239ENST00000513666 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
CAST-239ENST00000513666 RFC4P35249 363 aa12.57□□□□□ -0.4
CAST-239ENST00000513666 HSPA1AP0DMV8 641 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms