RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 FAM187AA6NFU0 413 aa10.38□□□□□ -0.75
RFC1-215ENST00000512881 DGAT1O75907 488 aa10.38□□□□□ -0.75
RFC1-215ENST00000512881 GJA5P36382 358 aa10.38□□□□□ -0.75
RFC1-215ENST00000512881 TBX22Q9Y458 520 aa10.38□□□□□ -0.75
RFC1-215ENST00000512881 PLEKHG1Q9ULL1 1385 aa10.38□□□□□ -0.75
RFC1-215ENST00000512881 ADGRB3O60242 1522 aa10.38□□□□□ -0.75
RFC1-215ENST00000512881 SOCS7O14512 581 aa10.37□□□□□ -0.75
RFC1-215ENST00000512881 ZFYVE9O95405 1425 aa10.37□□□□□ -0.75
RFC1-215ENST00000512881 MYT1Q01538 1121 aa10.37□□□□□ -0.75
RFC1-215ENST00000512881 CCDC24Q8N4L8 307 aa10.37□□□□□ -0.75
RFC1-215ENST00000512881 NUDT12Q9BQG2 462 aa10.37□□□□□ -0.75
RFC1-215ENST00000512881 TOR4AQ9NXH8 423 aa10.37□□□□□ -0.75
RFC1-215ENST00000512881 TET3O43151 1660 aa10.37□□□□□ -0.75
RFC1-215ENST00000512881 ALKQ9UM73 1620 aa10.36□□□□□ -0.75
RFC1-215ENST00000512881 MTMR2Q13614 643 aa10.36□□□□□ -0.75
RFC1-215ENST00000512881 DIXDC1Q155Q3 683 aa10.36□□□□□ -0.75
RFC1-215ENST00000512881 STRCP1A6NGW2 1772 aa10.36□□□□□ -0.75
RFC1-215ENST00000512881 UNC13BO14795 1591 aa10.35□□□□□ -0.75
RFC1-215ENST00000512881 KDM5AP29375 1690 aaKnown RBP10.35□□□□□ -0.75
RFC1-215ENST00000512881 RRBP1Q9P2E9 1410 aaKnown RBP10.35□□□□□ -0.75
RFC1-215ENST00000512881 WNT7AO00755 349 aa10.35□□□□□ -0.75
RFC1-215ENST00000512881 SPTLC1O15269 473 aa10.35□□□□□ -0.75
RFC1-215ENST00000512881 SKOR1P84550 965 aa10.34□□□□□ -0.75
RFC1-215ENST00000512881 PRR7Q8TB68 274 aa10.34□□□□□ -0.75
RFC1-215ENST00000512881 PCDHB15Q9Y5E8 787 aa10.34□□□□□ -0.75
RFC1-215ENST00000512881 FAM135BQ49AJ0 1406 aa10.33□□□□□ -0.76
RFC1-215ENST00000512881 PTPRNQ16849 979 aa10.33□□□□□ -0.76
RFC1-215ENST00000512881 ZNF326Q5BKZ1 582 aaKnown RBP10.33□□□□□ -0.76
RFC1-215ENST00000512881 TRIM52Q96A61 297 aa10.33□□□□□ -0.76
RFC1-215ENST00000512881 SLAIN2Q9P270 581 aa10.33□□□□□ -0.76
RFC1-215ENST00000512881 NAIPQ13075 1403 aa10.33□□□□□ -0.76
RFC1-215ENST00000512881 SPDYE5A6NIY4 337 aa10.32□□□□□ -0.76
RFC1-215ENST00000512881 CCNYL3P0C7X3 344 aa10.32□□□□□ -0.76
RFC1-215ENST00000512881 MYSM1Q5VVJ2 828 aa10.32□□□□□ -0.76
RFC1-215ENST00000512881 PTCRAQ6ISU1 281 aaPredicted RBP10.32□□□□□ -0.76
RFC1-215ENST00000512881 TMEM131LA2VDJ0 1609 aa10.32□□□□□ -0.76
RFC1-215ENST00000512881 IQGAP3Q86VI3 1631 aa10.32□□□□□ -0.76
RFC1-215ENST00000512881 MSH6P52701 1360 aa10.31□□□□□ -0.76
RFC1-215ENST00000512881 DESI1Q6ICB0 168 aa10.31□□□□□ -0.76
RFC1-215ENST00000512881 C14orf37Q86TY3 774 aa10.31□□□□□ -0.76
RFC1-215ENST00000512881 CYP4X1Q8N118 509 aa10.31□□□□□ -0.76
RFC1-215ENST00000512881 AMOTL2Q9Y2J4 779 aa10.31□□□□□ -0.76
RFC1-215ENST00000512881 ADAMTS13Q76LX8 1427 aa10.31□□□□□ -0.76
RFC1-215ENST00000512881 CFAP99D6REC4 459 aa10.3□□□□□ -0.76
RFC1-215ENST00000512881 HRCP23327 699 aa10.3□□□□□ -0.76
RFC1-215ENST00000512881 WNT7BP56706 349 aa10.3□□□□□ -0.76
RFC1-215ENST00000512881 RIC3Q7Z5B4 369 aa10.3□□□□□ -0.76
RFC1-215ENST00000512881 MRGPRX2Q96LB1 330 aa10.3□□□□□ -0.76
RFC1-215ENST00000512881 LIMD1Q9UGP4 676 aa10.3□□□□□ -0.76
RFC1-215ENST00000512881 E9PCH4 1651 aa10.3□□□□□ -0.76
RFC1-215ENST00000512881 NKTRP30414 1462 aaKnown RBP10.3□□□□□ -0.76
RFC1-215ENST00000512881 PIK3R4Q99570 1358 aa10.29□□□□□ -0.76
RFC1-215ENST00000512881 GCC2Q8IWJ2 1684 aa10.29□□□□□ -0.76
RFC1-215ENST00000512881 ST8SIA5O15466 376 aa10.29□□□□□ -0.76
RFC1-215ENST00000512881 CABLES1Q8TDN4 633 aa10.29□□□□□ -0.76
RFC1-215ENST00000512881 ZBTB3Q9H5J0 574 aa10.29□□□□□ -0.76
RFC1-215ENST00000512881 C19orf44Q9H6X5 657 aa10.29□□□□□ -0.76
RFC1-215ENST00000512881 NCOA3Q9Y6Q9 1424 aa10.28□□□□□ -0.76
RFC1-215ENST00000512881 AVPP01185 164 aa10.28□□□□□ -0.76
RFC1-215ENST00000512881 PRPF38BQ5VTL8 546 aaKnown RBP10.28□□□□□ -0.76
RFC1-215ENST00000512881 MED1Q15648 1581 aaPredicted RBP10.27□□□□□ -0.76
RFC1-215ENST00000512881 HFM1A2PYH4 1435 aa10.27□□□□□ -0.77
RFC1-215ENST00000512881 ATF3P18847 181 aa10.27□□□□□ -0.77
RFC1-215ENST00000512881 CRIPAKQ8N1N5 446 aa10.27□□□□□ -0.77
RFC1-215ENST00000512881 SNIP1Q8TAD8 396 aaKnown RBP10.27□□□□□ -0.77
RFC1-215ENST00000512881 AAASQ9NRG9 546 aa10.27□□□□□ -0.77
RFC1-215ENST00000512881 EVA1BQ9NVM1 165 aa10.27□□□□□ -0.77
RFC1-215ENST00000512881 NWD1Q149M9 1564 aa10.26□□□□□ -0.77
RFC1-215ENST00000512881 PTPRUQ92729 1446 aa10.26□□□□□ -0.77
RFC1-215ENST00000512881 QPCTQ16769 361 aa10.26□□□□□ -0.77
RFC1-215ENST00000512881 CSPP1Q1MSJ5 1256 aa10.26□□□□□ -0.77
RFC1-215ENST00000512881 TUSC1Q2TAM9 212 aa10.26□□□□□ -0.77
RFC1-215ENST00000512881 RC3H1Q5TC82 1133 aaKnown RBP10.26□□□□□ -0.77
RFC1-215ENST00000512881 UNC93B1Q9H1C4 597 aa10.26□□□□□ -0.77
RFC1-215ENST00000512881 TTC24A2A3L6 582 aaPredicted RBP10.25□□□□□ -0.77
RFC1-215ENST00000512881 SMPD1P17405 629 aa10.25□□□□□ -0.77
RFC1-215ENST00000512881 GPBP1L1Q9HC44 474 aaPredicted RBP10.25□□□□□ -0.77
RFC1-215ENST00000512881 RGS17Q9UGC6 210 aaPredicted RBP10.25□□□□□ -0.77
RFC1-215ENST00000512881 XIRP1Q702N8 1843 aaKnown RBP10.25□□□□□ -0.77
RFC1-215ENST00000512881 METP08581 1390 aa10.25□□□□□ -0.77
RFC1-215ENST00000512881 KCNH2Q12809 1159 aa10.24□□□□□ -0.77
RFC1-215ENST00000512881 LYPD8Q6UX82 237 aa10.24□□□□□ -0.77
RFC1-215ENST00000512881 RPGRIP1LQ68CZ1 1315 aa10.24□□□□□ -0.77
RFC1-215ENST00000512881 J3QL48 77 aa10.23□□□□□ -0.77
RFC1-215ENST00000512881 CLK2P49760 499 aaKnown RBP10.23□□□□□ -0.77
RFC1-215ENST00000512881 SH3BP2P78314 561 aa10.23□□□□□ -0.77
RFC1-215ENST00000512881 ZNF787Q6DD87 383 aa10.23□□□□□ -0.77
RFC1-215ENST00000512881 MYO5BQ9ULV0 1848 aa10.23□□□□□ -0.77
RFC1-215ENST00000512881 DIP2AQ14689 1571 aa10.22□□□□□ -0.77
RFC1-215ENST00000512881 LILRB3O75022 631 aa10.22□□□□□ -0.77
RFC1-215ENST00000512881 F12P00748 615 aaPredicted RBP10.22□□□□□ -0.77
RFC1-215ENST00000512881 MPHOSPH9Q99550 1183 aa10.22□□□□□ -0.77
RFC1-215ENST00000512881 KDM4CQ9H3R0 1056 aa10.22□□□□□ -0.77
RFC1-215ENST00000512881 TRPM2O94759 1503 aa10.22□□□□□ -0.77
RFC1-215ENST00000512881 CHD2O14647 1828 aaKnown RBP10.21□□□□□ -0.77
RFC1-215ENST00000512881 POTECB2RU33 542 aa10.21□□□□□ -0.77
RFC1-215ENST00000512881 SMCPP49901 116 aaPredicted RBP10.21□□□□□ -0.77
RFC1-215ENST00000512881 CTC1Q2NKJ3 1217 aa10.21□□□□□ -0.77
RFC1-215ENST00000512881 LINC01559Q495D7 138 aa10.21□□□□□ -0.77
RFC1-215ENST00000512881 BRINP3Q76B58 766 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms