RNA–Protein interactions for RNA: ENST00000512878.1

RHOBTB3-213, Transcript of Rho related BTB domain containing 3, humanhuman

TSL 2

Gene RHOBTB3, Length 483 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOBTB3-213ENST00000512878 ATG3Q9NT62 314 aa17.36■□□□□ 0.37
RHOBTB3-213ENST00000512878 ERVV-2B6SEH9 535 aa17.35■□□□□ 0.37
RHOBTB3-213ENST00000512878 ITPK1Q13572 414 aa17.35■□□□□ 0.37
RHOBTB3-213ENST00000512878 KLHL34Q8N239 644 aa17.35■□□□□ 0.37
RHOBTB3-213ENST00000512878 SLC16A10Q8TF71 515 aa17.35■□□□□ 0.37
RHOBTB3-213ENST00000512878 CICQ96RK0 1608 aaPredicted RBP17.35■□□□□ 0.37
RHOBTB3-213ENST00000512878 LOC102724428A0A0B4J2F2 783 aa17.34■□□□□ 0.37
RHOBTB3-213ENST00000512878 SIPA1L3O60292 1781 aaPredicted RBP17.34■□□□□ 0.37
RHOBTB3-213ENST00000512878 DIAPH1O60610 1272 aaKnown RBP17.34■□□□□ 0.37
RHOBTB3-213ENST00000512878 HSP90AB1P08238 724 aaKnown RBP17.34■□□□□ 0.37
RHOBTB3-213ENST00000512878 SIK1P57059 783 aa17.34■□□□□ 0.37
RHOBTB3-213ENST00000512878 CHD4Q14839 1912 aa17.33■□□□□ 0.37
RHOBTB3-213ENST00000512878 TJP1Q07157 1748 aa17.33■□□□□ 0.37
RHOBTB3-213ENST00000512878 HMOX1P09601 288 aa17.33■□□□□ 0.36
RHOBTB3-213ENST00000512878 SLC4A9Q96Q91 983 aa17.33■□□□□ 0.36
RHOBTB3-213ENST00000512878 PHF14O94880 888 aa17.32■□□□□ 0.36
RHOBTB3-213ENST00000512878 NLGN2Q8NFZ4 835 aa17.32■□□□□ 0.36
RHOBTB3-213ENST00000512878 MRC1P22897 1456 aa17.31■□□□□ 0.36
RHOBTB3-213ENST00000512878 MAP3K5Q99683 1374 aa17.31■□□□□ 0.36
RHOBTB3-213ENST00000512878 C4AP0C0L4 1744 aa17.31■□□□□ 0.36
RHOBTB3-213ENST00000512878 YY1P25490 414 aa17.31■□□□□ 0.36
RHOBTB3-213ENST00000512878 AK7Q96M32 723 aa17.31■□□□□ 0.36
RHOBTB3-213ENST00000512878 UBR2Q8IWV8 1755 aa17.3■□□□□ 0.36
RHOBTB3-213ENST00000512878 POLD1P28340 1107 aa17.3■□□□□ 0.36
RHOBTB3-213ENST00000512878 ATP6V1AP38606 617 aa17.3■□□□□ 0.36
RHOBTB3-213ENST00000512878 C1orf141Q5JVX7 400 aa17.3■□□□□ 0.36
RHOBTB3-213ENST00000512878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.29■□□□□ 0.36
RHOBTB3-213ENST00000512878 HMGB2P26583 209 aaKnown RBP17.29■□□□□ 0.36
RHOBTB3-213ENST00000512878 DLG5Q8TDM6 1919 aa17.28■□□□□ 0.36
RHOBTB3-213ENST00000512878 CABP4P57796 275 aa17.28■□□□□ 0.36
RHOBTB3-213ENST00000512878 MTHFSDQ2M296 383 aaKnown RBP17.28■□□□□ 0.36
RHOBTB3-213ENST00000512878 AKAP4Q5JQC9 854 aa17.28■□□□□ 0.36
RHOBTB3-213ENST00000512878 DCAF8L1A6NGE4 600 aa17.27■□□□□ 0.36
RHOBTB3-213ENST00000512878 PPP2R1AP30153 589 aa17.27■□□□□ 0.36
RHOBTB3-213ENST00000512878 NFATC2IPQ8NCF5 419 aa17.27■□□□□ 0.36
RHOBTB3-213ENST00000512878 RBM42Q9BTD8 480 aaKnown RBP17.27■□□□□ 0.36
RHOBTB3-213ENST00000512878 GNPATO15228 680 aa17.26■□□□□ 0.35
RHOBTB3-213ENST00000512878 LGR6Q9HBX8 967 aa17.26■□□□□ 0.35
RHOBTB3-213ENST00000512878 FLAD1Q8NFF5 587 aa17.25■□□□□ 0.35
RHOBTB3-213ENST00000512878 U2SURPO15042 1029 aaKnown RBP17.24■□□□□ 0.35
RHOBTB3-213ENST00000512878 RNMTO43148 476 aaKnown RBP17.24■□□□□ 0.35
RHOBTB3-213ENST00000512878 SSFA2P28290 1259 aa17.24■□□□□ 0.35
RHOBTB3-213ENST00000512878 KIF13BQ9NQT8 1826 aa17.24■□□□□ 0.35
RHOBTB3-213ENST00000512878 KCPQ6ZWJ8 1503 aa17.23■□□□□ 0.35
RHOBTB3-213ENST00000512878 PTCD1O75127 700 aaKnown RBP17.23■□□□□ 0.35
RHOBTB3-213ENST00000512878 PELP1Q8IZL8 1130 aaKnown RBP17.23■□□□□ 0.35
RHOBTB3-213ENST00000512878 SLC52A2Q9HAB3 445 aa17.23■□□□□ 0.35
RHOBTB3-213ENST00000512878 GPR162Q16538 588 aa17.22■□□□□ 0.35
RHOBTB3-213ENST00000512878 RSPH6AQ9H0K4 717 aa17.22■□□□□ 0.35
RHOBTB3-213ENST00000512878 YBX3P16989 372 aaKnown RBP eCLIP17.21■□□□□ 0.35
RHOBTB3-213ENST00000512878 CFAP53Q96M91 514 aa17.21■□□□□ 0.35
RHOBTB3-213ENST00000512878 CNTNAP4Q9C0A0 1308 aa17.21■□□□□ 0.34
RHOBTB3-213ENST00000512878 SLC39A6Q13433 755 aa17.2■□□□□ 0.34
RHOBTB3-213ENST00000512878 RC3H1Q5TC82 1133 aaKnown RBP17.2■□□□□ 0.34
RHOBTB3-213ENST00000512878 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
RHOBTB3-213ENST00000512878 KIAA1551Q9HCM1 1747 aa17.19■□□□□ 0.34
RHOBTB3-213ENST00000512878 WWC3Q9ULE0 1092 aa17.19■□□□□ 0.34
RHOBTB3-213ENST00000512878 PRKAR2BP31323 418 aa17.18■□□□□ 0.34
RHOBTB3-213ENST00000512878 IL17REQ8NFR9 667 aa17.18■□□□□ 0.34
RHOBTB3-213ENST00000512878 ARHGEF1Q92888 912 aaKnown RBP17.18■□□□□ 0.34
RHOBTB3-213ENST00000512878 GAS2L2Q8NHY3 880 aa17.17■□□□□ 0.34
RHOBTB3-213ENST00000512878 RTCBQ9Y3I0 505 aaKnown RBP17.17■□□□□ 0.34
RHOBTB3-213ENST00000512878 CEMIPQ8WUJ3 1361 aa17.16■□□□□ 0.34
RHOBTB3-213ENST00000512878 BRCA1P38398 1863 aaKnown RBP17.16■□□□□ 0.34
RHOBTB3-213ENST00000512878 N4BP2Q86UW6 1770 aaPredicted RBP17.16■□□□□ 0.34
RHOBTB3-213ENST00000512878 GNAT3A8MTJ3 354 aa17.16■□□□□ 0.34
RHOBTB3-213ENST00000512878 RPS6KA4O75676 772 aa17.16■□□□□ 0.34
RHOBTB3-213ENST00000512878 CRKLP46109 303 aaKnown RBP17.16■□□□□ 0.34
RHOBTB3-213ENST00000512878 TRAPPC3LQ5T215 181 aa17.16■□□□□ 0.34
RHOBTB3-213ENST00000512878 DNAJC10Q8IXB1 793 aa17.16■□□□□ 0.34
RHOBTB3-213ENST00000512878 NUDCQ9Y266 331 aa17.16■□□□□ 0.34
RHOBTB3-213ENST00000512878 MMP10P09238 476 aa17.15■□□□□ 0.34
RHOBTB3-213ENST00000512878 ZNF784Q8NCA9 323 aaPredicted RBP17.15■□□□□ 0.34
RHOBTB3-213ENST00000512878 SRP68Q9UHB9 627 aaKnown RBP17.15■□□□□ 0.34
RHOBTB3-213ENST00000512878 CD2APQ9Y5K6 639 aa17.15■□□□□ 0.34
RHOBTB3-213ENST00000512878 AFDNP55196 1824 aaKnown RBP17.14■□□□□ 0.34
RHOBTB3-213ENST00000512878 FCHSD2O94868 740 aa17.14■□□□□ 0.33
RHOBTB3-213ENST00000512878 U2AF1L5P0DN76 240 aaPredicted RBP17.14■□□□□ 0.33
RHOBTB3-213ENST00000512878 ADRA2BP18089 450 aa17.14■□□□□ 0.33
RHOBTB3-213ENST00000512878 U2AF1Q01081 240 aaKnown RBP eCLIP17.14■□□□□ 0.33
RHOBTB3-213ENST00000512878 INTS5Q6P9B9 1019 aaKnown RBP17.14■□□□□ 0.33
RHOBTB3-213ENST00000512878 GYS1P13807 737 aa17.13■□□□□ 0.33
RHOBTB3-213ENST00000512878 CYP19A1P11511 503 aaPredicted RBP17.11■□□□□ 0.33
RHOBTB3-213ENST00000512878 RFC4P35249 363 aa17.11■□□□□ 0.33
RHOBTB3-213ENST00000512878 DDX10Q13206 875 aaKnown RBP17.11■□□□□ 0.33
RHOBTB3-213ENST00000512878 VSIG10Q8N0Z9 540 aa17.11■□□□□ 0.33
RHOBTB3-213ENST00000512878 KDM3BQ7LBC6 1761 aa17.1■□□□□ 0.33
RHOBTB3-213ENST00000512878 TEFQ10587 303 aa17.1■□□□□ 0.33
RHOBTB3-213ENST00000512878 FKBP8Q14318 412 aa17.09■□□□□ 0.33
RHOBTB3-213ENST00000512878 ZNF790Q6PG37 636 aa17.09■□□□□ 0.33
RHOBTB3-213ENST00000512878 CCDC87Q9NVE4 849 aa17.09■□□□□ 0.33
RHOBTB3-213ENST00000512878 SOS1Q07889 1333 aaPredicted RBP17.09■□□□□ 0.33
RHOBTB3-213ENST00000512878 PXDNLA1KZ92 1463 aa17.09■□□□□ 0.33
RHOBTB3-213ENST00000512878 NRXN2Q9P2S2 1712 aa17.09■□□□□ 0.33
RHOBTB3-213ENST00000512878 USP42Q9H9J4 1324 aaKnown RBP17.08■□□□□ 0.32
RHOBTB3-213ENST00000512878 KCNQ3O43525 872 aa17.08■□□□□ 0.32
RHOBTB3-213ENST00000512878 DDR1Q08345 913 aa17.08■□□□□ 0.32
RHOBTB3-213ENST00000512878 NLGN1Q8N2Q7 840 aa17.08■□□□□ 0.32
RHOBTB3-213ENST00000512878 ZNF496Q96IT1 587 aaPredicted RBP17.08■□□□□ 0.32
RHOBTB3-213ENST00000512878 PLEKHF1Q96S99 279 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms