RNA–Protein interactions for RNA: ENST00000512454.5

EXOSC9-211, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-211ENST00000512454 ZC3H6P61129 1189 aaKnown RBP11.48□□□□□ -0.57
EXOSC9-211ENST00000512454 CCDC146Q8IYE0 955 aa11.48□□□□□ -0.57
EXOSC9-211ENST00000512454 NGEFQ8N5V2 710 aa11.48□□□□□ -0.57
EXOSC9-211ENST00000512454 PLCH1Q4KWH8 1693 aa11.47□□□□□ -0.57
EXOSC9-211ENST00000512454 IGSF1Q8N6C5 1336 aa11.47□□□□□ -0.57
EXOSC9-211ENST00000512454 PLEKHF1Q96S99 279 aa11.47□□□□□ -0.57
EXOSC9-211ENST00000512454 RSPH6AQ9H0K4 717 aa11.47□□□□□ -0.57
EXOSC9-211ENST00000512454 APAF1O14727 1248 aa11.46□□□□□ -0.57
EXOSC9-211ENST00000512454 HAP1P54257 671 aaPredicted RBP11.46□□□□□ -0.57
EXOSC9-211ENST00000512454 VARS2Q5ST30 1063 aaKnown RBP11.46□□□□□ -0.57
EXOSC9-211ENST00000512454 NCAPD2Q15021 1401 aa11.46□□□□□ -0.57
EXOSC9-211ENST00000512454 NWD2Q9ULI1 1742 aa11.46□□□□□ -0.58
EXOSC9-211ENST00000512454 MAPK8IP3Q9UPT6 1336 aa11.46□□□□□ -0.58
EXOSC9-211ENST00000512454 ZBTB7CA1YPR0 619 aa11.45□□□□□ -0.58
EXOSC9-211ENST00000512454 RGL2O15211 777 aa11.45□□□□□ -0.58
EXOSC9-211ENST00000512454 HMOX1P09601 288 aa11.45□□□□□ -0.58
EXOSC9-211ENST00000512454 NEFMP07197 916 aa11.45□□□□□ -0.58
EXOSC9-211ENST00000512454 PRKAR2BP31323 418 aa11.45□□□□□ -0.58
EXOSC9-211ENST00000512454 TCP11L2Q8N4U5 519 aa11.45□□□□□ -0.58
EXOSC9-211ENST00000512454 EYA1Q99502 592 aa11.45□□□□□ -0.58
EXOSC9-211ENST00000512454 AXIN2Q9Y2T1 843 aa11.45□□□□□ -0.58
EXOSC9-211ENST00000512454 PARP4Q9UKK3 1724 aaKnown RBP11.44□□□□□ -0.58
EXOSC9-211ENST00000512454 SULT6B1Q6IMI4 303 aa11.44□□□□□ -0.58
EXOSC9-211ENST00000512454 PRDM11Q9NQV5 511 aa11.44□□□□□ -0.58
EXOSC9-211ENST00000512454 COL5A2P05997 1499 aaPredicted RBP11.43□□□□□ -0.58
EXOSC9-211ENST00000512454 NRAPQ86VF7 1730 aa11.43□□□□□ -0.58
EXOSC9-211ENST00000512454 ZNF521Q96K83 1311 aa11.43□□□□□ -0.58
EXOSC9-211ENST00000512454 AEBP1Q8IUX7 1158 aa11.43□□□□□ -0.58
EXOSC9-211ENST00000512454 ANKRD24Q8TF21 1146 aa11.43□□□□□ -0.58
EXOSC9-211ENST00000512454 LTV1Q96GA3 475 aaPredicted RBP11.43□□□□□ -0.58
EXOSC9-211ENST00000512454 WNK3Q9BYP7 1800 aa11.43□□□□□ -0.58
EXOSC9-211ENST00000512454 SENP3-EIF4A1A0A087X0R7 540 aa11.42□□□□□ -0.58
EXOSC9-211ENST00000512454 PDE3BQ13370 1112 aa11.42□□□□□ -0.58
EXOSC9-211ENST00000512454 CHRNA2Q15822 529 aa11.42□□□□□ -0.58
EXOSC9-211ENST00000512454 CCDC27Q2M243 656 aa11.42□□□□□ -0.58
EXOSC9-211ENST00000512454 PKD1L3Q7Z443 1732 aa11.42□□□□□ -0.58
EXOSC9-211ENST00000512454 JCADQ9P266 1359 aa11.42□□□□□ -0.58
EXOSC9-211ENST00000512454 ARSIQ5FYB1 569 aa11.41□□□□□ -0.58
EXOSC9-211ENST00000512454 ZNF687Q8N1G0 1237 aa11.41□□□□□ -0.58
EXOSC9-211ENST00000512454 SALL2Q9Y467 1007 aaPredicted RBP11.41□□□□□ -0.58
EXOSC9-211ENST00000512454 PLEKHG2Q9H7P9 1386 aa11.4□□□□□ -0.58
EXOSC9-211ENST00000512454 KIF3CO14782 793 aa11.4□□□□□ -0.58
EXOSC9-211ENST00000512454 TMPOP42166 694 aaKnown RBP11.4□□□□□ -0.58
EXOSC9-211ENST00000512454 NBPF6Q5VWK0 638 aa11.4□□□□□ -0.58
EXOSC9-211ENST00000512454 PHACTR3Q96KR7 559 aa11.4□□□□□ -0.58
EXOSC9-211ENST00000512454 NBPF4Q96M43 638 aa11.4□□□□□ -0.58
EXOSC9-211ENST00000512454 WWC1Q8IX03 1113 aa11.4□□□□□ -0.59
EXOSC9-211ENST00000512454 RRP7AQ9Y3A4 280 aaKnown RBP11.4□□□□□ -0.59
EXOSC9-211ENST00000512454 LRRC37A3O60309 1634 aa11.39□□□□□ -0.59
EXOSC9-211ENST00000512454 WDR17Q8IZU2 1322 aa11.39□□□□□ -0.59
EXOSC9-211ENST00000512454 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.39□□□□□ -0.59
EXOSC9-211ENST00000512454 FAM83GA6ND36 823 aa11.39□□□□□ -0.59
EXOSC9-211ENST00000512454 NEUROD2Q15784 382 aa11.39□□□□□ -0.59
EXOSC9-211ENST00000512454 NFE2L2Q16236 605 aa11.39□□□□□ -0.59
EXOSC9-211ENST00000512454 USHBP1Q8N6Y0 703 aa11.38□□□□□ -0.59
EXOSC9-211ENST00000512454 SHANK3Q9BYB0 1731 aa11.38□□□□□ -0.59
EXOSC9-211ENST00000512454 SCN11AQ9UI33 1791 aa11.37□□□□□ -0.59
EXOSC9-211ENST00000512454 C2orf72A6NCS6 295 aa11.37□□□□□ -0.59
EXOSC9-211ENST00000512454 CSB-PGBD3P0DP91 1061 aa11.37□□□□□ -0.59
EXOSC9-211ENST00000512454 RIPK4P57078 832 aa11.37□□□□□ -0.59
EXOSC9-211ENST00000512454 NLRP2Q9NX02 1062 aa11.37□□□□□ -0.59
EXOSC9-211ENST00000512454 SPATA31A6Q5VVP1 1343 aa11.37□□□□□ -0.59
EXOSC9-211ENST00000512454 CRB1P82279 1406 aa11.36□□□□□ -0.59
EXOSC9-211ENST00000512454 LMOD3Q0VAK6 560 aa11.36□□□□□ -0.59
EXOSC9-211ENST00000512454 WDR63Q8IWG1 891 aa11.36□□□□□ -0.59
EXOSC9-211ENST00000512454 ADAMTS7Q9UKP4 1686 aa11.36□□□□□ -0.59
EXOSC9-211ENST00000512454 SIPA1L3O60292 1781 aaPredicted RBP11.36□□□□□ -0.59
EXOSC9-211ENST00000512454 HSPA1LP34931 641 aa11.35□□□□□ -0.59
EXOSC9-211ENST00000512454 GAS2L2Q8NHY3 880 aa11.35□□□□□ -0.59
EXOSC9-211ENST00000512454 KHSRPQ92945 711 aaKnown RBP eCLIP11.35□□□□□ -0.592e-7■■□□□ 13.1
EXOSC9-211ENST00000512454 BTG4Q9NY30 223 aa11.35□□□□□ -0.59
EXOSC9-211ENST00000512454 MEGF6O75095 1541 aa11.35□□□□□ -0.59
EXOSC9-211ENST00000512454 SLIT2O94813 1529 aa11.35□□□□□ -0.59
EXOSC9-211ENST00000512454 LRP6O75581 1613 aa11.35□□□□□ -0.59
EXOSC9-211ENST00000512454 E9PSI1 815 aa11.35□□□□□ -0.59
EXOSC9-211ENST00000512454 ADAMTS2O95450 1211 aa11.35□□□□□ -0.59
EXOSC9-211ENST00000512454 MTHFSDQ2M296 383 aaKnown RBP11.35□□□□□ -0.59
EXOSC9-211ENST00000512454 CDCA7LQ96GN5 454 aa11.35□□□□□ -0.59
EXOSC9-211ENST00000512454 IL16Q14005 1332 aa11.34□□□□□ -0.59
EXOSC9-211ENST00000512454 OVOS2A0A0G2JMS6 1433 aa11.34□□□□□ -0.59
EXOSC9-211ENST00000512454 NUTM2BA6NNL0 878 aaPredicted RBP11.34□□□□□ -0.59
EXOSC9-211ENST00000512454 NUTM2EB1AL46 878 aaPredicted RBP11.34□□□□□ -0.59
EXOSC9-211ENST00000512454 CALD1Q05682 793 aaKnown RBP11.34□□□□□ -0.59
EXOSC9-211ENST00000512454 SLFN5Q08AF3 891 aa11.34□□□□□ -0.59
EXOSC9-211ENST00000512454 AMOTQ4VCS5 1084 aa11.34□□□□□ -0.59
EXOSC9-211ENST00000512454 TOM1L2Q6ZVM7 507 aa11.34□□□□□ -0.59
EXOSC9-211ENST00000512454 NUTM2AQ8IVF1 878 aaPredicted RBP11.34□□□□□ -0.59
EXOSC9-211ENST00000512454 RAPGEF4Q8WZA2 1011 aa11.34□□□□□ -0.59
EXOSC9-211ENST00000512454 CARD10Q9BWT7 1032 aa11.34□□□□□ -0.59
EXOSC9-211ENST00000512454 MAP3K5Q99683 1374 aa11.33□□□□□ -0.6
EXOSC9-211ENST00000512454 EVA1CP58658 441 aa11.33□□□□□ -0.6
EXOSC9-211ENST00000512454 LARP1Q6PKG0 1096 aaKnown RBP11.33□□□□□ -0.6
EXOSC9-211ENST00000512454 TRMT2AQ8IZ69 625 aaKnown RBP11.33□□□□□ -0.6
EXOSC9-211ENST00000512454 STRN4Q9NRL3 753 aa11.33□□□□□ -0.6
EXOSC9-211ENST00000512454 HTATSF1O43719 755 aaKnown RBP11.32□□□□□ -0.6
EXOSC9-211ENST00000512454 PLEKHO1Q53GL0 409 aaPredicted RBP11.32□□□□□ -0.6
EXOSC9-211ENST00000512454 DUSP27Q5VZP5 1158 aa11.32□□□□□ -0.6
EXOSC9-211ENST00000512454 KDM3BQ7LBC6 1761 aa11.31□□□□□ -0.6
EXOSC9-211ENST00000512454 GNAT3A8MTJ3 354 aa11.31□□□□□ -0.6
EXOSC9-211ENST00000512454 PPP1R37O75864 691 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms