RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 NSD3Q9BZ95 1437 aa14.37□□□□□ -0.11
PDLIM5-217ENST00000512274 ARFGEF1Q9Y6D6 1849 aa14.36□□□□□ -0.11
PDLIM5-217ENST00000512274 NBPF6Q5VWK0 638 aa14.36□□□□□ -0.11
PDLIM5-217ENST00000512274 HDGFL2Q7Z4V5 671 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-217ENST00000512274 RAPGEF4Q8WZA2 1011 aa14.36□□□□□ -0.11
PDLIM5-217ENST00000512274 SMARCC1Q92922 1105 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-217ENST00000512274 NBPF4Q96M43 638 aa14.36□□□□□ -0.11
PDLIM5-217ENST00000512274 CD163L1Q9NR16 1453 aa14.36□□□□□ -0.11
PDLIM5-217ENST00000512274 SBF1O95248 1867 aa14.35□□□□□ -0.11
PDLIM5-217ENST00000512274 DDX10Q13206 875 aaKnown RBP14.35□□□□□ -0.11
PDLIM5-217ENST00000512274 MAP3K19Q56UN5 1328 aa14.35□□□□□ -0.11
PDLIM5-217ENST00000512274 TATP17735 454 aaPredicted RBP14.34□□□□□ -0.11
PDLIM5-217ENST00000512274 FAM161AQ3B820 660 aa14.34□□□□□ -0.11
PDLIM5-217ENST00000512274 SLC12A5Q9H2X9 1139 aa14.34□□□□□ -0.11
PDLIM5-217ENST00000512274 CCDC87Q9NVE4 849 aa14.34□□□□□ -0.11
PDLIM5-217ENST00000512274 MAP2P11137 1827 aaKnown RBP14.34□□□□□ -0.11
PDLIM5-217ENST00000512274 C10orf71Q711Q0 1435 aa14.33□□□□□ -0.11
PDLIM5-217ENST00000512274 KCNA3P22001 575 aa14.33□□□□□ -0.12
PDLIM5-217ENST00000512274 CDCA8Q53HL2 280 aa14.33□□□□□ -0.12
PDLIM5-217ENST00000512274 PIGBQ92521 554 aa14.33□□□□□ -0.12
PDLIM5-217ENST00000512274 PUS7Q96PZ0 661 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-217ENST00000512274 PCDH11XQ9BZA7 1347 aa14.33□□□□□ -0.12
PDLIM5-217ENST00000512274 PCDH11YQ9BZA8 1340 aa14.33□□□□□ -0.12
PDLIM5-217ENST00000512274 EDC4Q6P2E9 1401 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-217ENST00000512274 LOC102724428A0A0B4J2F2 783 aa14.32□□□□□ -0.12
PDLIM5-217ENST00000512274 SIK1P57059 783 aa14.32□□□□□ -0.12
PDLIM5-217ENST00000512274 ITPK1Q13572 414 aa14.32□□□□□ -0.12
PDLIM5-217ENST00000512274 PIM2Q9P1W9 311 aa14.32□□□□□ -0.12
PDLIM5-217ENST00000512274 PCDH10Q9P2E7 1040 aa14.32□□□□□ -0.12
PDLIM5-217ENST00000512274 FOXN1O15353 648 aa14.31□□□□□ -0.12
PDLIM5-217ENST00000512274 ATP6V1AP38606 617 aa14.31□□□□□ -0.12
PDLIM5-217ENST00000512274 TMF1P82094 1093 aa14.31□□□□□ -0.12
PDLIM5-217ENST00000512274 MIER1Q8N108 512 aa14.31□□□□□ -0.12
PDLIM5-217ENST00000512274 MKRN1Q9UHC7 482 aaKnown RBP14.31□□□□□ -0.12
PDLIM5-217ENST00000512274 C4AP0C0L4 1744 aa14.31□□□□□ -0.12
PDLIM5-217ENST00000512274 CGNL1Q0VF96 1302 aa14.31□□□□□ -0.12
PDLIM5-217ENST00000512274 CCER2I3L3R5 266 aa14.3□□□□□ -0.12
PDLIM5-217ENST00000512274 CYP27B1O15528 508 aa14.3□□□□□ -0.12
PDLIM5-217ENST00000512274 DCAF5Q96JK2 942 aa14.3□□□□□ -0.12
PDLIM5-217ENST00000512274 PARP3Q9Y6F1 533 aa14.3□□□□□ -0.12
PDLIM5-217ENST00000512274 VEGFAP15692 232 aaPredicted RBP14.29□□□□□ -0.12
PDLIM5-217ENST00000512274 RRS1Q15050 365 aaKnown RBP14.29□□□□□ -0.12
PDLIM5-217ENST00000512274 DALRD3Q5D0E6 543 aaKnown RBP14.29□□□□□ -0.12
PDLIM5-217ENST00000512274 TRAPPC3LQ5T215 181 aa14.29□□□□□ -0.12
PDLIM5-217ENST00000512274 NLGN1Q8N2Q7 840 aa14.29□□□□□ -0.12
PDLIM5-217ENST00000512274 COG3Q96JB2 828 aa14.29□□□□□ -0.12
PDLIM5-217ENST00000512274 ASAP1Q9ULH1 1129 aa14.29□□□□□ -0.12
PDLIM5-217ENST00000512274 A0A1W2PP64 1363 aa14.29□□□□□ -0.12
PDLIM5-217ENST00000512274 CCDC88AQ3V6T2 1871 aa14.29□□□□□ -0.12
PDLIM5-217ENST00000512274 PCNTO95613 3336 aa14.28□□□□□ -0.12
PDLIM5-217ENST00000512274 RASSF7Q02833 373 aa14.28□□□□□ -0.12
PDLIM5-217ENST00000512274 TERF2IPQ9NYB0 399 aa14.28□□□□□ -0.12
PDLIM5-217ENST00000512274 CHRNA5P30532 468 aa14.27□□□□□ -0.13
PDLIM5-217ENST00000512274 ARHGEF1Q92888 912 aaKnown RBP14.27□□□□□ -0.13
PDLIM5-217ENST00000512274 RTCBQ9Y3I0 505 aaKnown RBP14.27□□□□□ -0.13
PDLIM5-217ENST00000512274 ANP32CO43423 234 aa14.26□□□□□ -0.13
PDLIM5-217ENST00000512274 GYS1P13807 737 aa14.26□□□□□ -0.13
PDLIM5-217ENST00000512274 GLTPD2A6NH11 291 aa14.25□□□□□ -0.13
PDLIM5-217ENST00000512274 PRDM10Q9NQV6 1147 aa14.25□□□□□ -0.13
PDLIM5-217ENST00000512274 SMG6Q86US8 1419 aaKnown RBP14.24□□□□□ -0.13
PDLIM5-217ENST00000512274 RFC4P35249 363 aa14.24□□□□□ -0.13
PDLIM5-217ENST00000512274 TMOD3Q9NYL9 352 aa14.24□□□□□ -0.13
PDLIM5-217ENST00000512274 NPC1L1Q9UHC9 1359 aa14.22□□□□□ -0.13
PDLIM5-217ENST00000512274 TIAM2Q8IVF5 1701 aa14.22□□□□□ -0.13
PDLIM5-217ENST00000512274 CTCFP49711 727 aaPredicted RBP14.22□□□□□ -0.13
PDLIM5-217ENST00000512274 LBX1P52954 281 aa14.22□□□□□ -0.13
PDLIM5-217ENST00000512274 HSP90AB2PQ58FF8 381 aa14.22□□□□□ -0.13
PDLIM5-217ENST00000512274 AIDAQ96BJ3 306 aa14.22□□□□□ -0.13
PDLIM5-217ENST00000512274 ABHD8Q96I13 439 aa14.22□□□□□ -0.13
PDLIM5-217ENST00000512274 RBM42Q9BTD8 480 aaKnown RBP14.22□□□□□ -0.13
PDLIM5-217ENST00000512274 RTL1A6NKG5 1358 aa14.22□□□□□ -0.13
PDLIM5-217ENST00000512274 POTECB2RU33 542 aa14.21□□□□□ -0.13
PDLIM5-217ENST00000512274 CREBZFQ9NS37 354 aa14.21□□□□□ -0.13
PDLIM5-217ENST00000512274 ATG3Q9NT62 314 aa14.21□□□□□ -0.13
PDLIM5-217ENST00000512274 PER1O15534 1290 aaPredicted RBP14.2□□□□□ -0.14
PDLIM5-217ENST00000512274 LMNB1P20700 586 aa14.2□□□□□ -0.14
PDLIM5-217ENST00000512274 MLLT1Q03111 559 aaPredicted RBP14.2□□□□□ -0.14
PDLIM5-217ENST00000512274 NKX1-1Q15270 411 aaPredicted RBP14.2□□□□□ -0.14
PDLIM5-217ENST00000512274 PRKRIP1Q9H875 184 aaPredicted RBP14.2□□□□□ -0.14
PDLIM5-217ENST00000512274 CCDC85CA6NKD9 419 aa14.19□□□□□ -0.14
PDLIM5-217ENST00000512274 SLC4A9Q96Q91 983 aa14.19□□□□□ -0.14
PDLIM5-217ENST00000512274 SRP68Q9UHB9 627 aaKnown RBP14.19□□□□□ -0.14
PDLIM5-217ENST00000512274 ZC3H4Q9UPT8 1303 aaKnown RBP14.18□□□□□ -0.14
PDLIM5-217ENST00000512274 RPS6KA4O75676 772 aa14.18□□□□□ -0.14
PDLIM5-217ENST00000512274 ADRA2BP18089 450 aa14.18□□□□□ -0.14
PDLIM5-217ENST00000512274 DDR1Q08345 913 aa14.18□□□□□ -0.14
PDLIM5-217ENST00000512274 FKBP8Q14318 412 aa14.18□□□□□ -0.14
PDLIM5-217ENST00000512274 GGNBP2Q9H3C7 697 aa14.18□□□□□ -0.14
PDLIM5-217ENST00000512274 SPG7Q9UQ90 795 aa14.18□□□□□ -0.14
PDLIM5-217ENST00000512274 CNTNAP1P78357 1384 aa14.18□□□□□ -0.14
PDLIM5-217ENST00000512274 MYH14Q7Z406 1995 aaKnown RBP14.18□□□□□ -0.14
PDLIM5-217ENST00000512274 KDM6AO15550 1401 aaPredicted RBP14.17□□□□□ -0.14
PDLIM5-217ENST00000512274 POTEIP0CG38 1075 aa14.17□□□□□ -0.14
PDLIM5-217ENST00000512274 POTEJP0CG39 1038 aa14.17□□□□□ -0.14
PDLIM5-217ENST00000512274 VEGFBP49765 207 aa14.17□□□□□ -0.14
PDLIM5-217ENST00000512274 COL5A3P25940 1745 aaPredicted RBP14.17□□□□□ -0.14
PDLIM5-217ENST00000512274 VIRMAQ69YN4 1812 aaKnown RBP14.16□□□□□ -0.14
PDLIM5-217ENST00000512274 RC3H1Q5TC82 1133 aaKnown RBP14.16□□□□□ -0.14
PDLIM5-217ENST00000512274 CHADLQ6NUI6 762 aa14.16□□□□□ -0.14
PDLIM5-217ENST00000512274 DPY19L2Q6NUT2 758 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms