RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 PLCD3Q8N3E9 789 aa8.05□□□□□ -1.12
RNF4-217ENST00000511892 ZCRB1Q8TBF4 217 aaKnown RBP8.05□□□□□ -1.12
RNF4-217ENST00000511892 PDGFDQ9GZP0 370 aaPredicted RBP8.05□□□□□ -1.12
RNF4-217ENST00000511892 PANK3Q9H999 370 aa8.05□□□□□ -1.12
RNF4-217ENST00000511892 BMP2KQ9NSY1 1161 aaPredicted RBP8.05□□□□□ -1.12
RNF4-217ENST00000511892 TAF1LQ8IZX4 1826 aa8.05□□□□□ -1.12
RNF4-217ENST00000511892 NCAPD2Q15021 1401 aa8.04□□□□□ -1.12
RNF4-217ENST00000511892 POLKQ9UBT6 870 aa8.04□□□□□ -1.12
RNF4-217ENST00000511892 NSD2O96028 1365 aa8.04□□□□□ -1.12
RNF4-217ENST00000511892 GOLGB1Q14789 3259 aaKnown RBP8.04□□□□□ -1.12
RNF4-217ENST00000511892 WASHC2AQ641Q2 1341 aa8.03□□□□□ -1.12
RNF4-217ENST00000511892 PPM1GO15355 546 aaPredicted RBP8.03□□□□□ -1.12
RNF4-217ENST00000511892 VIRMAQ69YN4 1812 aaKnown RBP8.03□□□□□ -1.12
RNF4-217ENST00000511892 COL24A1Q17RW2 1714 aa8.03□□□□□ -1.12
RNF4-217ENST00000511892 POTEFA5A3E0 1075 aa8.02□□□□□ -1.13
RNF4-217ENST00000511892 TATP17735 454 aaPredicted RBP8.02□□□□□ -1.13
RNF4-217ENST00000511892 TNNT2P45379 298 aaPredicted RBP8.02□□□□□ -1.13
RNF4-217ENST00000511892 PRIM1P49642 420 aaKnown RBP8.02□□□□□ -1.13
RNF4-217ENST00000511892 SLC15A2Q16348 729 aa8.02□□□□□ -1.13
RNF4-217ENST00000511892 MAMSTRQ6ZN01 415 aa8.02□□□□□ -1.13
RNF4-217ENST00000511892 RAPGEF4Q8WZA2 1011 aa8.02□□□□□ -1.13
RNF4-217ENST00000511892 LRRC4BQ9NT99 713 aa8.02□□□□□ -1.13
RNF4-217ENST00000511892 KIF7Q2M1P5 1343 aa8.02□□□□□ -1.13
RNF4-217ENST00000511892 C5P01031 1676 aa8.02□□□□□ -1.13
RNF4-217ENST00000511892 EYA1Q99502 592 aa8.01□□□□□ -1.13
RNF4-217ENST00000511892 STK32BQ9NY57 414 aa8.01□□□□□ -1.13
RNF4-217ENST00000511892 CYP27B1O15528 508 aa8□□□□□ -1.13
RNF4-217ENST00000511892 KCNQ4P56696 695 aa8□□□□□ -1.13
RNF4-217ENST00000511892 EIF4A2Q14240 407 aaKnown RBP8□□□□□ -1.13
RNF4-217ENST00000511892 ZNF827Q17R98 1081 aa8□□□□□ -1.13
RNF4-217ENST00000511892 SYTL4Q96C24 671 aaPredicted RBP8□□□□□ -1.13
RNF4-217ENST00000511892 SPON1Q9HCB6 807 aa8□□□□□ -1.13
RNF4-217ENST00000511892 SCUBE2Q9NQ36 999 aa8□□□□□ -1.13
RNF4-217ENST00000511892 PCDH11XQ9BZA7 1347 aa8□□□□□ -1.13
RNF4-217ENST00000511892 PCDH11YQ9BZA8 1340 aa8□□□□□ -1.13
RNF4-217ENST00000511892 ZBTB7AO95365 584 aa7.99□□□□□ -1.13
RNF4-217ENST00000511892 SEC24BO95487 1268 aa7.99□□□□□ -1.13
RNF4-217ENST00000511892 AMER1Q5JTC6 1135 aaPredicted RBP7.99□□□□□ -1.13
RNF4-217ENST00000511892 SLC27A3Q5K4L6 730 aa7.99□□□□□ -1.13
RNF4-217ENST00000511892 COLQQ9Y215 455 aaPredicted RBP7.99□□□□□ -1.13
RNF4-217ENST00000511892 UBR3Q6ZT12 1888 aa7.98□□□□□ -1.13
RNF4-217ENST00000511892 PER1O15534 1290 aaPredicted RBP7.98□□□□□ -1.13
RNF4-217ENST00000511892 PTGER2P43116 358 aa7.98□□□□□ -1.13
RNF4-217ENST00000511892 NKX1-1Q15270 411 aaPredicted RBP7.98□□□□□ -1.13
RNF4-217ENST00000511892 MORC1Q86VD1 984 aa7.98□□□□□ -1.13
RNF4-217ENST00000511892 IGSF1Q8N6C5 1336 aa7.98□□□□□ -1.13
RNF4-217ENST00000511892 SCN11AQ9UI33 1791 aa7.97□□□□□ -1.13
RNF4-217ENST00000511892 TTLL13PA6NNM8 815 aa7.97□□□□□ -1.13
RNF4-217ENST00000511892 MPRIPQ6WCQ1 1025 aa7.97□□□□□ -1.13
RNF4-217ENST00000511892 SGIP1Q9BQI5 828 aa7.97□□□□□ -1.13
RNF4-217ENST00000511892 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.97□□□□□ -1.13
RNF4-217ENST00000511892 KNSTRNQ9Y448 316 aa7.97□□□□□ -1.13
RNF4-217ENST00000511892 C4BP0C0L5 1744 aa7.97□□□□□ -1.13
RNF4-217ENST00000511892 PHKG2P15735 406 aa7.96□□□□□ -1.14
RNF4-217ENST00000511892 TIE1P35590 1138 aa7.96□□□□□ -1.14
RNF4-217ENST00000511892 PIGBQ92521 554 aa7.96□□□□□ -1.14
RNF4-217ENST00000511892 MTFR1LQ9H019 292 aa7.96□□□□□ -1.14
RNF4-217ENST00000511892 CCNL1Q9UK58 526 aaPredicted RBP7.96□□□□□ -1.14
RNF4-217ENST00000511892 SPG7Q9UQ90 795 aa7.96□□□□□ -1.14
RNF4-217ENST00000511892 PCDHB13Q9Y5F0 798 aa7.96□□□□□ -1.14
RNF4-217ENST00000511892 PNPLA7Q6ZV29 1317 aa7.96□□□□□ -1.14
RNF4-217ENST00000511892 CHD4Q14839 1912 aa7.95□□□□□ -1.14
RNF4-217ENST00000511892 IL13P35225 146 aa7.95□□□□□ -1.14
RNF4-217ENST00000511892 LCE2DQ5TA82 110 aaPredicted RBP7.95□□□□□ -1.14
RNF4-217ENST00000511892 AEBP1Q8IUX7 1158 aa7.95□□□□□ -1.14
RNF4-217ENST00000511892 PPP1R1BQ9UD71 204 aaPredicted RBP7.95□□□□□ -1.14
RNF4-217ENST00000511892 MYH14Q7Z406 1995 aaKnown RBP7.95□□□□□ -1.14
RNF4-217ENST00000511892 ZNF831Q5JPB2 1677 aa7.95□□□□□ -1.14
RNF4-217ENST00000511892 PALLDQ8WX93 1383 aa7.95□□□□□ -1.14
RNF4-217ENST00000511892 PLEKHG2Q9H7P9 1386 aa7.95□□□□□ -1.14
RNF4-217ENST00000511892 COL5A3P25940 1745 aaPredicted RBP7.95□□□□□ -1.14
RNF4-217ENST00000511892 IFNL2Q8IZJ0 200 aa7.94□□□□□ -1.14
RNF4-217ENST00000511892 TFCP2L1Q9NZI6 479 aa7.94□□□□□ -1.14
RNF4-217ENST00000511892 TRIM35Q9UPQ4 493 aa7.94□□□□□ -1.14
RNF4-217ENST00000511892 KDRP35968 1356 aa7.94□□□□□ -1.14
RNF4-217ENST00000511892 MTHFSP49914 203 aa7.93□□□□□ -1.14
RNF4-217ENST00000511892 CC2D1BQ5T0F9 858 aaKnown RBP7.93□□□□□ -1.14
RNF4-217ENST00000511892 SULT6B1Q6IMI4 303 aa7.93□□□□□ -1.14
RNF4-217ENST00000511892 COL23A1Q86Y22 540 aaPredicted RBP7.93□□□□□ -1.14
RNF4-217ENST00000511892 ASAP1Q9ULH1 1129 aa7.93□□□□□ -1.14
RNF4-217ENST00000511892 KDM6AO15550 1401 aaPredicted RBP7.93□□□□□ -1.14
RNF4-217ENST00000511892 COL3A1P02461 1466 aaPredicted RBP7.93□□□□□ -1.14
RNF4-217ENST00000511892 PLEKHO1Q53GL0 409 aaPredicted RBP7.92□□□□□ -1.14
RNF4-217ENST00000511892 AMIGO3Q86WK7 504 aa7.92□□□□□ -1.14
RNF4-217ENST00000511892 SLC16A10Q8TF71 515 aa7.92□□□□□ -1.14
RNF4-217ENST00000511892 SMARCC1Q92922 1105 aaPredicted RBP7.92□□□□□ -1.14
RNF4-217ENST00000511892 ARXQ96QS3 562 aa7.92□□□□□ -1.14
RNF4-217ENST00000511892 SYT17Q9BSW7 474 aa7.92□□□□□ -1.14
RNF4-217ENST00000511892 FHDC1Q9C0D6 1143 aaPredicted RBP7.92□□□□□ -1.14
RNF4-217ENST00000511892 ATG3Q9NT62 314 aa7.92□□□□□ -1.14
RNF4-217ENST00000511892 TMOD3Q9NYL9 352 aa7.92□□□□□ -1.14
RNF4-217ENST00000511892 NPC1L1Q9UHC9 1359 aa7.92□□□□□ -1.14
RNF4-217ENST00000511892 ADAMTS7Q9UKP4 1686 aa7.92□□□□□ -1.14
RNF4-217ENST00000511892 LOC102724428A0A0B4J2F2 783 aa7.91□□□□□ -1.14
RNF4-217ENST00000511892 ERVV-2B6SEH9 535 aa7.91□□□□□ -1.14
RNF4-217ENST00000511892 NUBP1P53384 320 aa7.91□□□□□ -1.14
RNF4-217ENST00000511892 SIK1P57059 783 aa7.91□□□□□ -1.14
RNF4-217ENST00000511892 FKBP8Q14318 412 aa7.91□□□□□ -1.14
RNF4-217ENST00000511892 AMOTQ4VCS5 1084 aa7.91□□□□□ -1.14
RNF4-217ENST00000511892 ZNF530Q6P9A1 599 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms