RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 AMIGO3Q86WK7 504 aa17.89■□□□□ 0.45
RNF4-215ENST00000511843 LINC00116Q8NCU8 138 aa17.89■□□□□ 0.45
RNF4-215ENST00000511843 SGIP1Q9BQI5 828 aa17.89■□□□□ 0.45
RNF4-215ENST00000511843 ADAMTS7Q9UKP4 1686 aa17.89■□□□□ 0.45
RNF4-215ENST00000511843 COL23A1Q86Y22 540 aaPredicted RBP17.88■□□□□ 0.45
RNF4-215ENST00000511843 CFAP53Q96M91 514 aa17.88■□□□□ 0.45
RNF4-215ENST00000511843 LGR6Q9HBX8 967 aa17.88■□□□□ 0.45
RNF4-215ENST00000511843 ZNF831Q5JPB2 1677 aa17.87■□□□□ 0.45
RNF4-215ENST00000511843 ATP6V1AP38606 617 aa17.87■□□□□ 0.45
RNF4-215ENST00000511843 AKAP4Q5JQC9 854 aa17.87■□□□□ 0.45
RNF4-215ENST00000511843 NFATC2IPQ8NCF5 419 aa17.87■□□□□ 0.45
RNF4-215ENST00000511843 SLC4A9Q96Q91 983 aa17.87■□□□□ 0.45
RNF4-215ENST00000511843 RBM42Q9BTD8 480 aaKnown RBP17.87■□□□□ 0.45
RNF4-215ENST00000511843 MYH14Q7Z406 1995 aaKnown RBP17.87■□□□□ 0.45
RNF4-215ENST00000511843 TJP1Q07157 1748 aa17.86■□□□□ 0.45
RNF4-215ENST00000511843 PHF14O94880 888 aa17.86■□□□□ 0.45
RNF4-215ENST00000511843 DDX10Q13206 875 aaKnown RBP17.86■□□□□ 0.45
RNF4-215ENST00000511843 MSL1Q68DK7 614 aa17.86■□□□□ 0.45
RNF4-215ENST00000511843 AK7Q96M32 723 aa17.86■□□□□ 0.45
RNF4-215ENST00000511843 MRC1P22897 1456 aa17.85■□□□□ 0.45
RNF4-215ENST00000511843 SIPA1L3O60292 1781 aaPredicted RBP17.84■□□□□ 0.45
RNF4-215ENST00000511843 RNMTO43148 476 aaKnown RBP17.84■□□□□ 0.45
RNF4-215ENST00000511843 PTCD1O75127 700 aaKnown RBP17.84■□□□□ 0.45
RNF4-215ENST00000511843 FHDC1Q9C0D6 1143 aaPredicted RBP17.84■□□□□ 0.45
RNF4-215ENST00000511843 PRKAR2BP31323 418 aa17.83■□□□□ 0.44
RNF4-215ENST00000511843 SLC16A10Q8TF71 515 aa17.83■□□□□ 0.44
RNF4-215ENST00000511843 PHACTR3Q96KR7 559 aa17.83■□□□□ 0.44
RNF4-215ENST00000511843 ARXQ96QS3 562 aa17.83■□□□□ 0.44
RNF4-215ENST00000511843 RSPH6AQ9H0K4 717 aa17.83■□□□□ 0.44
RNF4-215ENST00000511843 DLG5Q8TDM6 1919 aa17.82■□□□□ 0.44
RNF4-215ENST00000511843 GNPATO15228 680 aa17.82■□□□□ 0.44
RNF4-215ENST00000511843 U2AF1L5P0DN76 240 aaPredicted RBP17.82■□□□□ 0.44
RNF4-215ENST00000511843 U2AF1Q01081 240 aaKnown RBP eCLIP17.82■□□□□ 0.44
RNF4-215ENST00000511843 SLC52A2Q9HAB3 445 aa17.82■□□□□ 0.44
RNF4-215ENST00000511843 UBR2Q8IWV8 1755 aa17.81■□□□□ 0.44
RNF4-215ENST00000511843 C4AP0C0L4 1744 aa17.81■□□□□ 0.44
RNF4-215ENST00000511843 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.81■□□□□ 0.44
RNF4-215ENST00000511843 KLHL34Q8N239 644 aa17.81■□□□□ 0.44
RNF4-215ENST00000511843 MAP3K5Q99683 1374 aa17.8■□□□□ 0.44
RNF4-215ENST00000511843 CICQ96RK0 1608 aaPredicted RBP17.8■□□□□ 0.44
RNF4-215ENST00000511843 SLC39A6Q13433 755 aa17.8■□□□□ 0.44
RNF4-215ENST00000511843 NUDCQ9Y266 331 aa17.8■□□□□ 0.44
RNF4-215ENST00000511843 KCPQ6ZWJ8 1503 aa17.79■□□□□ 0.44
RNF4-215ENST00000511843 SYT17Q9BSW7 474 aa17.79■□□□□ 0.44
RNF4-215ENST00000511843 POLD1P28340 1107 aa17.78■□□□□ 0.44
RNF4-215ENST00000511843 GAS2L2Q8NHY3 880 aa17.78■□□□□ 0.44
RNF4-215ENST00000511843 GNAT3A8MTJ3 354 aa17.77■□□□□ 0.44
RNF4-215ENST00000511843 SSFA2P28290 1259 aa17.77■□□□□ 0.44
RNF4-215ENST00000511843 FLAD1Q8NFF5 587 aa17.77■□□□□ 0.44
RNF4-215ENST00000511843 IL17REQ8NFR9 667 aa17.77■□□□□ 0.44
RNF4-215ENST00000511843 HMGB2P26583 209 aaKnown RBP17.75■□□□□ 0.43
RNF4-215ENST00000511843 CNTNAP4Q9C0A0 1308 aa17.74■□□□□ 0.43
RNF4-215ENST00000511843 CRKLP46109 303 aaKnown RBP17.74■□□□□ 0.43
RNF4-215ENST00000511843 DNAJC10Q8IXB1 793 aa17.74■□□□□ 0.43
RNF4-215ENST00000511843 RTCBQ9Y3I0 505 aaKnown RBP17.74■□□□□ 0.43
RNF4-215ENST00000511843 FCHSD2O94868 740 aa17.73■□□□□ 0.43
RNF4-215ENST00000511843 TEFQ10587 303 aa17.73■□□□□ 0.43
RNF4-215ENST00000511843 NLGN2Q8NFZ4 835 aa17.73■□□□□ 0.43
RNF4-215ENST00000511843 DCTN1Q14203 1278 aa17.72■□□□□ 0.43
RNF4-215ENST00000511843 RALBP1Q15311 655 aa17.72■□□□□ 0.43
RNF4-215ENST00000511843 RC3H1Q5TC82 1133 aaKnown RBP17.72■□□□□ 0.43
RNF4-215ENST00000511843 CEMIPQ8WUJ3 1361 aa17.71■□□□□ 0.43
RNF4-215ENST00000511843 RPS6KA4O75676 772 aa17.71■□□□□ 0.43
RNF4-215ENST00000511843 MCM10Q7L590 875 aa17.71■□□□□ 0.43
RNF4-215ENST00000511843 ARHGEF1Q92888 912 aaKnown RBP17.71■□□□□ 0.43
RNF4-215ENST00000511843 ZEB1P37275 1124 aaPredicted RBP17.7■□□□□ 0.42
RNF4-215ENST00000511843 TRAPPC3LQ5T215 181 aa17.7■□□□□ 0.42
RNF4-215ENST00000511843 INTS5Q6P9B9 1019 aaKnown RBP17.7■□□□□ 0.42
RNF4-215ENST00000511843 KCNQ3O43525 872 aa17.69■□□□□ 0.42
RNF4-215ENST00000511843 MYBBP1AQ9BQG0 1328 aaKnown RBP17.69■□□□□ 0.42
RNF4-215ENST00000511843 CHD4Q14839 1912 aa17.68■□□□□ 0.42
RNF4-215ENST00000511843 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
RNF4-215ENST00000511843 CYP19A1P11511 503 aaPredicted RBP17.68■□□□□ 0.42
RNF4-215ENST00000511843 TTC5Q8N0Z6 440 aa17.68■□□□□ 0.42
RNF4-215ENST00000511843 ZNF496Q96IT1 587 aaPredicted RBP17.68■□□□□ 0.42
RNF4-215ENST00000511843 PLEKHF1Q96S99 279 aa17.68■□□□□ 0.42
RNF4-215ENST00000511843 CCDC87Q9NVE4 849 aa17.68■□□□□ 0.42
RNF4-215ENST00000511843 SRP68Q9UHB9 627 aaKnown RBP17.68■□□□□ 0.42
RNF4-215ENST00000511843 RFC4P35249 363 aa17.67■□□□□ 0.42
RNF4-215ENST00000511843 ZNF790Q6PG37 636 aa17.67■□□□□ 0.42
RNF4-215ENST00000511843 PELP1Q8IZL8 1130 aaKnown RBP17.67■□□□□ 0.42
RNF4-215ENST00000511843 N4BP2Q86UW6 1770 aaPredicted RBP17.66■□□□□ 0.42
RNF4-215ENST00000511843 KIF13BQ9NQT8 1826 aa17.66■□□□□ 0.42
RNF4-215ENST00000511843 MMP10P09238 476 aa17.66■□□□□ 0.42
RNF4-215ENST00000511843 ADRA2BP18089 450 aa17.66■□□□□ 0.42
RNF4-215ENST00000511843 RTF1Q92541 710 aaKnown RBP17.66■□□□□ 0.42
RNF4-215ENST00000511843 HEG1Q9ULI3 1381 aa17.66■□□□□ 0.42
RNF4-215ENST00000511843 KIAA1551Q9HCM1 1747 aa17.65■□□□□ 0.42
RNF4-215ENST00000511843 BTBD11A6QL63 1104 aa17.65■□□□□ 0.42
RNF4-215ENST00000511843 GYS1P13807 737 aa17.65■□□□□ 0.42
RNF4-215ENST00000511843 ZBTB1Q9Y2K1 713 aa17.65■□□□□ 0.42
RNF4-215ENST00000511843 KDM3BQ7LBC6 1761 aa17.64■□□□□ 0.41
RNF4-215ENST00000511843 THUMPD2Q9BTF0 503 aaKnown RBP17.64■□□□□ 0.41
RNF4-215ENST00000511843 WWC3Q9ULE0 1092 aa17.64■□□□□ 0.41
RNF4-215ENST00000511843 GOLGB1Q14789 3259 aaKnown RBP17.64■□□□□ 0.41
RNF4-215ENST00000511843 SOS1Q07889 1333 aaPredicted RBP17.64■□□□□ 0.41
RNF4-215ENST00000511843 NEFMP07197 916 aa17.63■□□□□ 0.41
RNF4-215ENST00000511843 CANXP27824 592 aaKnown RBP17.63■□□□□ 0.41
RNF4-215ENST00000511843 GPR162Q16538 588 aa17.63■□□□□ 0.41
RNF4-215ENST00000511843 VSIG10Q8N0Z9 540 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms