RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 SMIM5Q71RC9 77 aa13.39□□□□□ -0.27
PTPN20-225ENST00000511769 DDX54Q8TDD1 881 aaKnown RBP13.39□□□□□ -0.27
PTPN20-225ENST00000511769 CREBZFQ9NS37 354 aa13.39□□□□□ -0.27
PTPN20-225ENST00000511769 CABP1Q9NZU7 370 aa13.39□□□□□ -0.27
PTPN20-225ENST00000511769 A0A0G2JLW4 131 aa13.38□□□□□ -0.27
PTPN20-225ENST00000511769 HSPA8P11142 646 aaKnown RBP13.38□□□□□ -0.27
PTPN20-225ENST00000511769 NLRP2Q9NX02 1062 aa13.38□□□□□ -0.27
PTPN20-225ENST00000511769 NSD2O96028 1365 aa13.38□□□□□ -0.27
PTPN20-225ENST00000511769 N4BP2Q86UW6 1770 aaPredicted RBP13.37□□□□□ -0.27
PTPN20-225ENST00000511769 KIAA1551Q9HCM1 1747 aa13.37□□□□□ -0.27
PTPN20-225ENST00000511769 ERBB3P21860 1342 aa13.37□□□□□ -0.27
PTPN20-225ENST00000511769 C5P01031 1676 aa13.37□□□□□ -0.27
PTPN20-225ENST00000511769 CNTNAP1P78357 1384 aa13.37□□□□□ -0.27
PTPN20-225ENST00000511769 ANKRD36BQ8N2N9 1353 aa13.37□□□□□ -0.27
PTPN20-225ENST00000511769 DOT1LQ8TEK3 1739 aa13.36□□□□□ -0.27
PTPN20-225ENST00000511769 PHF14O94880 888 aa13.36□□□□□ -0.27
PTPN20-225ENST00000511769 PRKRIP1Q9H875 184 aaPredicted RBP13.36□□□□□ -0.27
PTPN20-225ENST00000511769 KTN1Q86UP2 1357 aaKnown RBP13.35□□□□□ -0.27
PTPN20-225ENST00000511769 VEGFAP15692 232 aaPredicted RBP13.35□□□□□ -0.27
PTPN20-225ENST00000511769 TGFB2P61812 414 aa13.35□□□□□ -0.27
PTPN20-225ENST00000511769 RALBP1Q15311 655 aa13.35□□□□□ -0.27
PTPN20-225ENST00000511769 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
PTPN20-225ENST00000511769 WBP1LQ9NX94 342 aa13.35□□□□□ -0.27
PTPN20-225ENST00000511769 CC2D1BQ5T0F9 858 aaKnown RBP13.34□□□□□ -0.27
PTPN20-225ENST00000511769 CARD14Q9BXL6 1004 aa13.34□□□□□ -0.27
PTPN20-225ENST00000511769 TNRC18O15417 2968 aaPredicted RBP13.33□□□□□ -0.28
PTPN20-225ENST00000511769 CCER2I3L3R5 266 aa13.33□□□□□ -0.28
PTPN20-225ENST00000511769 AMIGO3Q86WK7 504 aa13.33□□□□□ -0.28
PTPN20-225ENST00000511769 KCNH5Q8NCM2 988 aa13.33□□□□□ -0.28
PTPN20-225ENST00000511769 AK7Q96M32 723 aa13.33□□□□□ -0.28
PTPN20-225ENST00000511769 NSD3Q9BZ95 1437 aa13.32□□□□□ -0.28
PTPN20-225ENST00000511769 DPEP1P16444 411 aa13.32□□□□□ -0.28
PTPN20-225ENST00000511769 VEGFBP49765 207 aa13.32□□□□□ -0.28
PTPN20-225ENST00000511769 CGNL1Q0VF96 1302 aa13.32□□□□□ -0.28
PTPN20-225ENST00000511769 TOGARAM1Q9Y4F4 1720 aa13.31□□□□□ -0.28
PTPN20-225ENST00000511769 A0A1W2PP64 1363 aa13.31□□□□□ -0.28
PTPN20-225ENST00000511769 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.31□□□□□ -0.28
PTPN20-225ENST00000511769 AMER1Q5JTC6 1135 aaPredicted RBP13.31□□□□□ -0.28
PTPN20-225ENST00000511769 KIF13BQ9NQT8 1826 aa13.3□□□□□ -0.28
PTPN20-225ENST00000511769 NPC1L1Q9UHC9 1359 aa13.3□□□□□ -0.28
PTPN20-225ENST00000511769 MMP10P09238 476 aa13.3□□□□□ -0.28
PTPN20-225ENST00000511769 PRPF38BQ5VTL8 546 aaKnown RBP13.29□□□□□ -0.28
PTPN20-225ENST00000511769 C4BP0C0L5 1744 aa13.29□□□□□ -0.28
PTPN20-225ENST00000511769 GLTPD2A6NH11 291 aa13.28□□□□□ -0.28
PTPN20-225ENST00000511769 MORC1Q86VD1 984 aa13.28□□□□□ -0.28
PTPN20-225ENST00000511769 MYBBP1AQ9BQG0 1328 aaKnown RBP13.28□□□□□ -0.28
PTPN20-225ENST00000511769 CD163L1Q9NR16 1453 aa13.28□□□□□ -0.28
PTPN20-225ENST00000511769 NFAT5O94916 1531 aa13.27□□□□□ -0.28
PTPN20-225ENST00000511769 ARFGEF1Q9Y6D6 1849 aa13.27□□□□□ -0.29
PTPN20-225ENST00000511769 BRCA1P38398 1863 aaKnown RBP13.27□□□□□ -0.29
PTPN20-225ENST00000511769 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.27□□□□□ -0.29
PTPN20-225ENST00000511769 DCAF5Q96JK2 942 aa13.27□□□□□ -0.29
PTPN20-225ENST00000511769 TAF1LQ8IZX4 1826 aa13.26□□□□□ -0.29
PTPN20-225ENST00000511769 HMGB2P26583 209 aaKnown RBP13.26□□□□□ -0.29
PTPN20-225ENST00000511769 ZBTB12Q9Y330 459 aaPredicted RBP13.26□□□□□ -0.29
PTPN20-225ENST00000511769 ZC3H4Q9UPT8 1303 aaKnown RBP13.26□□□□□ -0.29
PTPN20-225ENST00000511769 EDC4Q6P2E9 1401 aaKnown RBP13.26□□□□□ -0.29
PTPN20-225ENST00000511769 VIRMAQ69YN4 1812 aaKnown RBP13.25□□□□□ -0.29
PTPN20-225ENST00000511769 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
PTPN20-225ENST00000511769 UBR3Q6ZT12 1888 aa13.25□□□□□ -0.29
PTPN20-225ENST00000511769 ANKRD24Q8TF21 1146 aa13.25□□□□□ -0.29
PTPN20-225ENST00000511769 MRS2Q9HD23 443 aa13.25□□□□□ -0.29
PTPN20-225ENST00000511769 PALLDQ8WX93 1383 aa13.24□□□□□ -0.29
PTPN20-225ENST00000511769 FYB1O15117 783 aa13.24□□□□□ -0.29
PTPN20-225ENST00000511769 SSFA2P28290 1259 aa13.24□□□□□ -0.29
PTPN20-225ENST00000511769 RASSF7Q02833 373 aa13.24□□□□□ -0.29
PTPN20-225ENST00000511769 DALRD3Q5D0E6 543 aaKnown RBP13.24□□□□□ -0.29
PTPN20-225ENST00000511769 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
PTPN20-225ENST00000511769 PIM2Q9P1W9 311 aa13.24□□□□□ -0.29
PTPN20-225ENST00000511769 TTC21BQ7Z4L5 1316 aa13.23□□□□□ -0.29
PTPN20-225ENST00000511769 KCNA3P22001 575 aa13.23□□□□□ -0.29
PTPN20-225ENST00000511769 MAP2K1Q02750 393 aaPredicted RBP13.23□□□□□ -0.29
PTPN20-225ENST00000511769 MCOLN1Q9GZU1 580 aa13.23□□□□□ -0.29
PTPN20-225ENST00000511769 GGNBP2Q9H3C7 697 aa13.23□□□□□ -0.29
PTPN20-225ENST00000511769 CCDC87Q9NVE4 849 aa13.23□□□□□ -0.29
PTPN20-225ENST00000511769 SBF1O95248 1867 aa13.22□□□□□ -0.29
PTPN20-225ENST00000511769 POTECB2RU33 542 aa13.22□□□□□ -0.29
PTPN20-225ENST00000511769 PPP2R1AP30153 589 aa13.22□□□□□ -0.29
PTPN20-225ENST00000511769 TTC21AQ8NDW8 1320 aa13.21□□□□□ -0.29
PTPN20-225ENST00000511769 TNNT2P45379 298 aaPredicted RBP13.21□□□□□ -0.29
PTPN20-225ENST00000511769 COG3Q96JB2 828 aa13.21□□□□□ -0.29
PTPN20-225ENST00000511769 MON2Q7Z3U7 1717 aa13.21□□□□□ -0.3
PTPN20-225ENST00000511769 POTEIP0CG38 1075 aa13.2□□□□□ -0.3
PTPN20-225ENST00000511769 POTEJP0CG39 1038 aa13.2□□□□□ -0.3
PTPN20-225ENST00000511769 TIAM2Q8IVF5 1701 aa13.19□□□□□ -0.3
PTPN20-225ENST00000511769 TMEM88BA6NKF7 163 aa13.19□□□□□ -0.3
PTPN20-225ENST00000511769 NME9Q86XW9 330 aa13.19□□□□□ -0.3
PTPN20-225ENST00000511769 KDM6AO15550 1401 aaPredicted RBP13.19□□□□□ -0.3
PTPN20-225ENST00000511769 KIF20BQ96Q89 1820 aa13.19□□□□□ -0.3
PTPN20-225ENST00000511769 LMNB1P20700 586 aa13.18□□□□□ -0.3
PTPN20-225ENST00000511769 CCDC184Q52MB2 194 aa13.18□□□□□ -0.3
PTPN20-225ENST00000511769 C4AP0C0L4 1744 aa13.18□□□□□ -0.3
PTPN20-225ENST00000511769 PASKQ96RG2 1323 aa13.18□□□□□ -0.3
PTPN20-225ENST00000511769 WDR33Q9C0J8 1336 aaKnown RBP13.18□□□□□ -0.3
PTPN20-225ENST00000511769 ZBTB22O15209 634 aa13.17□□□□□ -0.3
PTPN20-225ENST00000511769 GNPATO15228 680 aa13.17□□□□□ -0.3
PTPN20-225ENST00000511769 SOX10P56693 466 aa13.17□□□□□ -0.3
PTPN20-225ENST00000511769 FAM9BQ8IZU0 186 aa13.17□□□□□ -0.3
PTPN20-225ENST00000511769 ZCRB1Q8TBF4 217 aaKnown RBP13.17□□□□□ -0.3
PTPN20-225ENST00000511769 BEGAINQ9BUH8 593 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms