RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 TATP17735 454 aaPredicted RBP17.1■□□□□ 0.33
COPS4-210ENST00000511708 SIK1P57059 783 aa17.1■□□□□ 0.33
COPS4-210ENST00000511708 SMC1BQ8NDV3 1235 aa17.1■□□□□ 0.33
COPS4-210ENST00000511708 PIGBQ92521 554 aa17.1■□□□□ 0.33
COPS4-210ENST00000511708 KCNA3P22001 575 aa17.09■□□□□ 0.33
COPS4-210ENST00000511708 RRAGCQ9HB90 399 aa17.09■□□□□ 0.33
COPS4-210ENST00000511708 GNPATO15228 680 aa17.08■□□□□ 0.32
COPS4-210ENST00000511708 ITPK1Q13572 414 aa17.08■□□□□ 0.32
COPS4-210ENST00000511708 COG3Q96JB2 828 aa17.08■□□□□ 0.32
COPS4-210ENST00000511708 NKX1-1Q15270 411 aaPredicted RBP17.06■□□□□ 0.32
COPS4-210ENST00000511708 NLGN1Q8N2Q7 840 aa17.06■□□□□ 0.32
COPS4-210ENST00000511708 DCAF5Q96JK2 942 aa17.06■□□□□ 0.32
COPS4-210ENST00000511708 SMG6Q86US8 1419 aaKnown RBP17.05■□□□□ 0.32
COPS4-210ENST00000511708 PUS7Q96PZ0 661 aaKnown RBP17.05■□□□□ 0.32
COPS4-210ENST00000511708 CCDC87Q9NVE4 849 aa17.05■□□□□ 0.32
COPS4-210ENST00000511708 RNF181Q9P0P0 153 aa17.05■□□□□ 0.32
COPS4-210ENST00000511708 ZNF831Q5JPB2 1677 aa17.04■□□□□ 0.32
COPS4-210ENST00000511708 TMF1P82094 1093 aa17.04■□□□□ 0.32
COPS4-210ENST00000511708 RRS1Q15050 365 aaKnown RBP17.04■□□□□ 0.32
COPS4-210ENST00000511708 COL5A3P25940 1745 aaPredicted RBP17.03■□□□□ 0.32
COPS4-210ENST00000511708 INSRP06213 1382 aa17.02■□□□□ 0.32
COPS4-210ENST00000511708 ATP6V1AP38606 617 aa17.02■□□□□ 0.32
COPS4-210ENST00000511708 PIM2Q9P1W9 311 aa17.02■□□□□ 0.32
COPS4-210ENST00000511708 ASAP1Q9ULH1 1129 aa17.02■□□□□ 0.32
COPS4-210ENST00000511708 NCAPD2Q15021 1401 aa17.02■□□□□ 0.31
COPS4-210ENST00000511708 ZC3H4Q9UPT8 1303 aaKnown RBP17.01■□□□□ 0.31
COPS4-210ENST00000511708 MYH14Q7Z406 1995 aaKnown RBP17.01■□□□□ 0.31
COPS4-210ENST00000511708 GYS1P13807 737 aa17.01■□□□□ 0.31
COPS4-210ENST00000511708 TRAPPC3LQ5T215 181 aa17.01■□□□□ 0.31
COPS4-210ENST00000511708 KDM6AO15550 1401 aaPredicted RBP17.01■□□□□ 0.31
COPS4-210ENST00000511708 KDRP35968 1356 aa17.01■□□□□ 0.31
COPS4-210ENST00000511708 RTCBQ9Y3I0 505 aaKnown RBP17■□□□□ 0.31
COPS4-210ENST00000511708 CCDC88AQ3V6T2 1871 aa16.99■□□□□ 0.31
COPS4-210ENST00000511708 ADRA2BP18089 450 aa16.99■□□□□ 0.31
COPS4-210ENST00000511708 HSP90AB2PQ58FF8 381 aa16.99■□□□□ 0.31
COPS4-210ENST00000511708 DALRD3Q5D0E6 543 aaKnown RBP16.99■□□□□ 0.31
COPS4-210ENST00000511708 ARHGEF1Q92888 912 aaKnown RBP16.99■□□□□ 0.31
COPS4-210ENST00000511708 PARP3Q9Y6F1 533 aa16.99■□□□□ 0.31
COPS4-210ENST00000511708 VEGFAP15692 232 aaPredicted RBP16.98■□□□□ 0.31
COPS4-210ENST00000511708 TMOD3Q9NYL9 352 aa16.98■□□□□ 0.31
COPS4-210ENST00000511708 KIF24Q5T7B8 1368 aa16.98■□□□□ 0.31
COPS4-210ENST00000511708 TIAM2Q8IVF5 1701 aa16.97■□□□□ 0.31
COPS4-210ENST00000511708 ATG3Q9NT62 314 aa16.97■□□□□ 0.31
COPS4-210ENST00000511708 PCDH10Q9P2E7 1040 aa16.97■□□□□ 0.31
COPS4-210ENST00000511708 FLT4P35916 1363 aa16.97■□□□□ 0.31
COPS4-210ENST00000511708 GLTPD2A6NH11 291 aa16.96■□□□□ 0.31
COPS4-210ENST00000511708 RC3H1Q5TC82 1133 aaKnown RBP16.96■□□□□ 0.31
COPS4-210ENST00000511708 SLC4A9Q96Q91 983 aa16.96■□□□□ 0.31
COPS4-210ENST00000511708 FYB1O15117 783 aa16.95■□□□□ 0.3
COPS4-210ENST00000511708 PRDM10Q9NQV6 1147 aa16.95■□□□□ 0.3
COPS4-210ENST00000511708 CNTNAP4Q9C0A0 1308 aa16.95■□□□□ 0.3
COPS4-210ENST00000511708 RPS6KA4O75676 772 aa16.94■□□□□ 0.3
COPS4-210ENST00000511708 SPG7Q9UQ90 795 aa16.94■□□□□ 0.3
COPS4-210ENST00000511708 FOXN1O15353 648 aa16.93■□□□□ 0.3
COPS4-210ENST00000511708 CHRNA5P30532 468 aa16.93■□□□□ 0.3
COPS4-210ENST00000511708 RFC4P35249 363 aa16.93■□□□□ 0.3
COPS4-210ENST00000511708 RASSF7Q02833 373 aa16.93■□□□□ 0.3
COPS4-210ENST00000511708 SIN3AQ96ST3 1273 aa16.93■□□□□ 0.3
COPS4-210ENST00000511708 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
COPS4-210ENST00000511708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.93■□□□□ 0.3
COPS4-210ENST00000511708 KIF20BQ96Q89 1820 aa16.93■□□□□ 0.3
COPS4-210ENST00000511708 DLEC1Q9Y238 1755 aa16.92■□□□□ 0.3
COPS4-210ENST00000511708 TONSLQ96HA7 1378 aa16.92■□□□□ 0.3
COPS4-210ENST00000511708 POTECB2RU33 542 aa16.92■□□□□ 0.3
COPS4-210ENST00000511708 DDR1Q08345 913 aa16.92■□□□□ 0.3
COPS4-210ENST00000511708 GGNBP2Q9H3C7 697 aa16.92■□□□□ 0.3
COPS4-210ENST00000511708 ANKRD26Q9UPS8 1709 aa16.91■□□□□ 0.3
COPS4-210ENST00000511708 LMNB1P20700 586 aa16.91■□□□□ 0.3
COPS4-210ENST00000511708 CREBZFQ9NS37 354 aa16.91■□□□□ 0.3
COPS4-210ENST00000511708 ADAMTS7Q9UKP4 1686 aa16.91■□□□□ 0.3
COPS4-210ENST00000511708 DICER1Q9UPY3 1922 aaKnown RBP16.9■□□□□ 0.3
COPS4-210ENST00000511708 PHKG2P15735 406 aa16.9■□□□□ 0.3
COPS4-210ENST00000511708 AFDNP55196 1824 aaKnown RBP16.9■□□□□ 0.3
COPS4-210ENST00000511708 VIRMAQ69YN4 1812 aaKnown RBP16.89■□□□□ 0.29
COPS4-210ENST00000511708 FKBP8Q14318 412 aa16.89■□□□□ 0.29
COPS4-210ENST00000511708 IFNL2Q8IZJ0 200 aa16.89■□□□□ 0.29
COPS4-210ENST00000511708 TESK2Q96S53 571 aa16.89■□□□□ 0.29
COPS4-210ENST00000511708 MKRN1Q9UHC7 482 aaKnown RBP16.89■□□□□ 0.29
COPS4-210ENST00000511708 FAM161AQ3B820 660 aa16.88■□□□□ 0.29
COPS4-210ENST00000511708 USP42Q9H9J4 1324 aaKnown RBP16.88■□□□□ 0.29
COPS4-210ENST00000511708 NRXN2Q9P2S2 1712 aa16.87■□□□□ 0.29
COPS4-210ENST00000511708 RBM42Q9BTD8 480 aaKnown RBP16.87■□□□□ 0.29
COPS4-210ENST00000511708 SRP68Q9UHB9 627 aaKnown RBP16.87■□□□□ 0.29
COPS4-210ENST00000511708 CNTNAP1P78357 1384 aa16.87■□□□□ 0.29
COPS4-210ENST00000511708 POLRMTO00411 1230 aaKnown RBP16.86■□□□□ 0.29
COPS4-210ENST00000511708 CTCFP49711 727 aaPredicted RBP16.86■□□□□ 0.29
COPS4-210ENST00000511708 TM4SF1P30408 202 aa16.85■□□□□ 0.29
COPS4-210ENST00000511708 EMILIN1Q9Y6C2 1016 aa16.85■□□□□ 0.29
COPS4-210ENST00000511708 TJP1Q07157 1748 aa16.84■□□□□ 0.29
COPS4-210ENST00000511708 ERVV-2B6SEH9 535 aa16.84■□□□□ 0.29
COPS4-210ENST00000511708 EYA1Q99502 592 aa16.84■□□□□ 0.29
COPS4-210ENST00000511708 NFKBIEO00221 500 aa16.83■□□□□ 0.28
COPS4-210ENST00000511708 NEUROD1Q13562 356 aa16.83■□□□□ 0.28
COPS4-210ENST00000511708 CHADLQ6NUI6 762 aa16.83■□□□□ 0.28
COPS4-210ENST00000511708 ABHD8Q96I13 439 aa16.83■□□□□ 0.28
COPS4-210ENST00000511708 FER1L6Q2WGJ9 1857 aa16.82■□□□□ 0.28
COPS4-210ENST00000511708 CRKLP46109 303 aaKnown RBP16.82■□□□□ 0.28
COPS4-210ENST00000511708 WASHC2AQ641Q2 1341 aa16.81■□□□□ 0.28
COPS4-210ENST00000511708 WBP1LQ9NX94 342 aa16.81■□□□□ 0.28
COPS4-210ENST00000511708 PASKQ96RG2 1323 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms