RNA–Protein interactions for RNA: ENST00000511697.1

CALCOCO2-219, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-219ENST00000511697 SMARCC1Q92922 1105 aaPredicted RBP13.65□□□□□ -0.22
CALCOCO2-219ENST00000511697 AK7Q96M32 723 aa13.65□□□□□ -0.22
CALCOCO2-219ENST00000511697 POLKQ9UBT6 870 aa13.65□□□□□ -0.22
CALCOCO2-219ENST00000511697 YBX3P16989 372 aaKnown RBP eCLIP13.64□□□□□ -0.237e-12■□□□□ 11.1
CALCOCO2-219ENST00000511697 AMIGO3Q86WK7 504 aa13.64□□□□□ -0.23
CALCOCO2-219ENST00000511697 EIF4A2Q14240 407 aaKnown RBP13.63□□□□□ -0.23
CALCOCO2-219ENST00000511697 NKX1-1Q15270 411 aaPredicted RBP13.63□□□□□ -0.23
CALCOCO2-219ENST00000511697 FLAD1Q8NFF5 587 aa13.63□□□□□ -0.23
CALCOCO2-219ENST00000511697 TMOD3Q9NYL9 352 aa13.63□□□□□ -0.23
CALCOCO2-219ENST00000511697 CLSPNQ9HAW4 1339 aa13.63□□□□□ -0.23
CALCOCO2-219ENST00000511697 LINC00116Q8NCU8 138 aa13.62□□□□□ -0.23
CALCOCO2-219ENST00000511697 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.61□□□□□ -0.23
CALCOCO2-219ENST00000511697 LOC102724428A0A0B4J2F2 783 aa13.61□□□□□ -0.23
CALCOCO2-219ENST00000511697 HSPA5P11021 654 aaKnown RBP13.61□□□□□ -0.23
CALCOCO2-219ENST00000511697 PHKG2P15735 406 aa13.61□□□□□ -0.23
CALCOCO2-219ENST00000511697 HMGB2P26583 209 aaKnown RBP13.61□□□□□ -0.23
CALCOCO2-219ENST00000511697 SIK1P57059 783 aa13.61□□□□□ -0.23
CALCOCO2-219ENST00000511697 IFNL2Q8IZJ0 200 aa13.61□□□□□ -0.23
CALCOCO2-219ENST00000511697 ASAP1Q9ULH1 1129 aa13.61□□□□□ -0.23
CALCOCO2-219ENST00000511697 EIF4G2P78344 907 aaKnown RBP eCLIP13.6□□□□□ -0.23
CALCOCO2-219ENST00000511697 PANK3Q9H999 370 aa13.6□□□□□ -0.23
CALCOCO2-219ENST00000511697 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.6□□□□□ -0.234e-12■□□□□ 8.2
CALCOCO2-219ENST00000511697 WWC3Q9ULE0 1092 aa13.6□□□□□ -0.23
CALCOCO2-219ENST00000511697 SENP3-EIF4A1A0A087X0R7 540 aa13.59□□□□□ -0.23
CALCOCO2-219ENST00000511697 GNPATO15228 680 aa13.59□□□□□ -0.23
CALCOCO2-219ENST00000511697 GRIN3BO60391 1043 aa13.59□□□□□ -0.23
CALCOCO2-219ENST00000511697 ATP6V1AP38606 617 aa13.59□□□□□ -0.23
CALCOCO2-219ENST00000511697 C1QTNF8P60827 252 aa13.59□□□□□ -0.23
CALCOCO2-219ENST00000511697 ITPK1Q13572 414 aa13.59□□□□□ -0.23
CALCOCO2-219ENST00000511697 CD2APQ9Y5K6 639 aa13.59□□□□□ -0.23
CALCOCO2-219ENST00000511697 GIGYF1O75420 1035 aaPredicted RBP13.58□□□□□ -0.24
CALCOCO2-219ENST00000511697 ATG3Q9NT62 314 aa13.58□□□□□ -0.24
CALCOCO2-219ENST00000511697 IGSF1Q8N6C5 1336 aa13.58□□□□□ -0.24
CALCOCO2-219ENST00000511697 SSFA2P28290 1259 aa13.57□□□□□ -0.24
CALCOCO2-219ENST00000511697 CCER1Q8TC90 406 aaPredicted RBP13.56□□□□□ -0.24
CALCOCO2-219ENST00000511697 COL5A3P25940 1745 aaPredicted RBP13.56□□□□□ -0.24
CALCOCO2-219ENST00000511697 ZNF530Q6P9A1 599 aaPredicted RBP13.55□□□□□ -0.24
CALCOCO2-219ENST00000511697 MORC1Q86VD1 984 aa13.55□□□□□ -0.24
CALCOCO2-219ENST00000511697 RBM42Q9BTD8 480 aaKnown RBP13.55□□□□□ -0.24
CALCOCO2-219ENST00000511697 CEP350Q5VT06 3117 aa13.55□□□□□ -0.24
CALCOCO2-219ENST00000511697 KDRP35968 1356 aa13.55□□□□□ -0.24
CALCOCO2-219ENST00000511697 KDM6AO15550 1401 aaPredicted RBP13.55□□□□□ -0.24
CALCOCO2-219ENST00000511697 PLEKHO1Q53GL0 409 aaPredicted RBP13.54□□□□□ -0.24
CALCOCO2-219ENST00000511697 AEBP1Q8IUX7 1158 aa13.54□□□□□ -0.24
CALCOCO2-219ENST00000511697 DCAF5Q96JK2 942 aa13.54□□□□□ -0.24
CALCOCO2-219ENST00000511697 PLEKHG2Q9H7P9 1386 aa13.54□□□□□ -0.24
CALCOCO2-219ENST00000511697 ATP10DQ9P241 1426 aa13.54□□□□□ -0.24
CALCOCO2-219ENST00000511697 ZNF831Q5JPB2 1677 aa13.53□□□□□ -0.24
CALCOCO2-219ENST00000511697 N4BP2Q86UW6 1770 aaPredicted RBP13.53□□□□□ -0.24
CALCOCO2-219ENST00000511697 ERVV-2B6SEH9 535 aa13.53□□□□□ -0.24
CALCOCO2-219ENST00000511697 HSP90AB1P08238 724 aaKnown RBP13.53□□□□□ -0.24
CALCOCO2-219ENST00000511697 SLC4A9Q96Q91 983 aa13.53□□□□□ -0.24
CALCOCO2-219ENST00000511697 CICQ96RK0 1608 aaPredicted RBP13.53□□□□□ -0.24
CALCOCO2-219ENST00000511697 C4AP0C0L4 1744 aa13.53□□□□□ -0.24
CALCOCO2-219ENST00000511697 MYH14Q7Z406 1995 aaKnown RBP13.52□□□□□ -0.24
CALCOCO2-219ENST00000511697 MMP10P09238 476 aa13.52□□□□□ -0.25
CALCOCO2-219ENST00000511697 CABP4P57796 275 aa13.52□□□□□ -0.25
CALCOCO2-219ENST00000511697 RTCBQ9Y3I0 505 aaKnown RBP13.52□□□□□ -0.25
CALCOCO2-219ENST00000511697 KIF13BQ9NQT8 1826 aa13.52□□□□□ -0.25
CALCOCO2-219ENST00000511697 MTHFSP49914 203 aa13.51□□□□□ -0.25
CALCOCO2-219ENST00000511697 AMOTQ4VCS5 1084 aa13.51□□□□□ -0.25
CALCOCO2-219ENST00000511697 C1orf141Q5JVX7 400 aa13.51□□□□□ -0.25
CALCOCO2-219ENST00000511697 TRAPPC3LQ5T215 181 aa13.51□□□□□ -0.25
CALCOCO2-219ENST00000511697 SULT6B1Q6IMI4 303 aa13.51□□□□□ -0.25
CALCOCO2-219ENST00000511697 ZNF526Q8TF50 670 aaPredicted RBP13.51□□□□□ -0.25
CALCOCO2-219ENST00000511697 KNSTRNQ9Y448 316 aa13.51□□□□□ -0.25
CALCOCO2-219ENST00000511697 VIRMAQ69YN4 1812 aaKnown RBP13.5□□□□□ -0.25
CALCOCO2-219ENST00000511697 SCN11AQ9UI33 1791 aa13.5□□□□□ -0.25
CALCOCO2-219ENST00000511697 KIAA1551Q9HCM1 1747 aa13.5□□□□□ -0.25
CALCOCO2-219ENST00000511697 ADCY9O60503 1353 aa13.49□□□□□ -0.25
CALCOCO2-219ENST00000511697 PTCD1O75127 700 aaKnown RBP13.49□□□□□ -0.25
CALCOCO2-219ENST00000511697 GPBP1L1Q9HC44 474 aaPredicted RBP13.49□□□□□ -0.25
CALCOCO2-219ENST00000511697 TJP1Q07157 1748 aa13.49□□□□□ -0.25
CALCOCO2-219ENST00000511697 PXDNLA1KZ92 1463 aa13.48□□□□□ -0.25
CALCOCO2-219ENST00000511697 CNTNAP4Q9C0A0 1308 aa13.48□□□□□ -0.25
CALCOCO2-219ENST00000511697 IL13P35225 146 aa13.48□□□□□ -0.25
CALCOCO2-219ENST00000511697 NFATC2IPQ8NCF5 419 aa13.48□□□□□ -0.25
CALCOCO2-219ENST00000511697 ARHGEF1Q92888 912 aaKnown RBP13.48□□□□□ -0.25
CALCOCO2-219ENST00000511697 RFC4P35249 363 aa13.47□□□□□ -0.25
CALCOCO2-219ENST00000511697 RC3H1Q5TC82 1133 aaKnown RBP13.47□□□□□ -0.25
CALCOCO2-219ENST00000511697 NLGN1Q8N2Q7 840 aa13.47□□□□□ -0.25
CALCOCO2-219ENST00000511697 C10orf71Q711Q0 1435 aa13.47□□□□□ -0.25
CALCOCO2-219ENST00000511697 KIF7Q2M1P5 1343 aa13.46□□□□□ -0.25
CALCOCO2-219ENST00000511697 A0A0G2JLW4 131 aa13.46□□□□□ -0.25
CALCOCO2-219ENST00000511697 RPS6KA4O75676 772 aa13.46□□□□□ -0.25
CALCOCO2-219ENST00000511697 GYS1P13807 737 aa13.46□□□□□ -0.25
CALCOCO2-219ENST00000511697 AMER1Q5JTC6 1135 aaPredicted RBP13.46□□□□□ -0.25
CALCOCO2-219ENST00000511697 BRCA1P38398 1863 aaKnown RBP13.46□□□□□ -0.26
CALCOCO2-219ENST00000511697 HMOX1P09601 288 aa13.45□□□□□ -0.26
CALCOCO2-219ENST00000511697 CRKLP46109 303 aaKnown RBP13.45□□□□□ -0.26
CALCOCO2-219ENST00000511697 BCS1LQ9Y276 419 aa13.45□□□□□ -0.26
CALCOCO2-219ENST00000511697 PARP3Q9Y6F1 533 aa13.45□□□□□ -0.26
CALCOCO2-219ENST00000511697 CCDC87Q9NVE4 849 aa13.44□□□□□ -0.26
CALCOCO2-219ENST00000511697 SRP68Q9UHB9 627 aaKnown RBP13.44□□□□□ -0.26
CALCOCO2-219ENST00000511697 SPDYE2BA6NHP3 402 aa13.43□□□□□ -0.26
CALCOCO2-219ENST00000511697 SPDYE6P0CI01 402 aa13.43□□□□□ -0.26
CALCOCO2-219ENST00000511697 DPEP1P16444 411 aa13.43□□□□□ -0.26
CALCOCO2-219ENST00000511697 TGFB2P61812 414 aa13.43□□□□□ -0.26
CALCOCO2-219ENST00000511697 CNGB1Q14028 1251 aaPredicted RBP13.43□□□□□ -0.26
CALCOCO2-219ENST00000511697 SPDYE2Q495Y8 402 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms