RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 SLC15A2Q16348 729 aa9.47□□□□□ -0.89
PDLIM5-215ENST00000511586 IL17REQ8NFR9 667 aa9.47□□□□□ -0.89
PDLIM5-215ENST00000511586 NUP188Q5SRE5 1749 aa9.47□□□□□ -0.89
PDLIM5-215ENST00000511586 ITGB4P16144 1822 aa9.47□□□□□ -0.89
PDLIM5-215ENST00000511586 NFE2L2Q16236 605 aa9.46□□□□□ -0.9
PDLIM5-215ENST00000511586 AKT1S1Q96B36 256 aa9.46□□□□□ -0.9
PDLIM5-215ENST00000511586 RBM42Q9BTD8 480 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-215ENST00000511586 ADAMTS8Q9UP79 889 aa9.46□□□□□ -0.9
PDLIM5-215ENST00000511586 PTCD1O75127 700 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-215ENST00000511586 ATP6V1AP38606 617 aa9.45□□□□□ -0.9
PDLIM5-215ENST00000511586 RUNDC1Q96C34 613 aa9.45□□□□□ -0.9
PDLIM5-215ENST00000511586 TFCP2L1Q9NZI6 479 aa9.45□□□□□ -0.9
PDLIM5-215ENST00000511586 CEMIPQ8WUJ3 1361 aa9.45□□□□□ -0.9
PDLIM5-215ENST00000511586 SLC39A6Q13433 755 aa9.44□□□□□ -0.9
PDLIM5-215ENST00000511586 ZNF827Q17R98 1081 aa9.44□□□□□ -0.9
PDLIM5-215ENST00000511586 CCDC184Q52MB2 194 aa9.44□□□□□ -0.9
PDLIM5-215ENST00000511586 MCM10Q7L590 875 aa9.44□□□□□ -0.9
PDLIM5-215ENST00000511586 CCDC146Q8IYE0 955 aa9.44□□□□□ -0.9
PDLIM5-215ENST00000511586 MRS2Q9HD23 443 aa9.44□□□□□ -0.9
PDLIM5-215ENST00000511586 MRC1P22897 1456 aa9.44□□□□□ -0.9
PDLIM5-215ENST00000511586 LY75O60449 1722 aa9.44□□□□□ -0.9
PDLIM5-215ENST00000511586 SCN11AQ9UI33 1791 aa9.44□□□□□ -0.9
PDLIM5-215ENST00000511586 ADAMTS7Q9UKP4 1686 aa9.43□□□□□ -0.9
PDLIM5-215ENST00000511586 BTBD11A6QL63 1104 aa9.43□□□□□ -0.9
PDLIM5-215ENST00000511586 TMPOP42166 694 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-215ENST00000511586 RIPK4P57078 832 aa9.43□□□□□ -0.9
PDLIM5-215ENST00000511586 ITPK1Q13572 414 aa9.43□□□□□ -0.9
PDLIM5-215ENST00000511586 DCTN1Q14203 1278 aa9.43□□□□□ -0.9
PDLIM5-215ENST00000511586 TTC5Q8N0Z6 440 aa9.43□□□□□ -0.9
PDLIM5-215ENST00000511586 AK7Q96M32 723 aa9.43□□□□□ -0.9
PDLIM5-215ENST00000511586 PAPPAQ13219 1627 aa9.42□□□□□ -0.9
PDLIM5-215ENST00000511586 LMOD3Q0VAK6 560 aa9.42□□□□□ -0.9
PDLIM5-215ENST00000511586 TAF7Q15545 349 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-215ENST00000511586 ZNF790Q6PG37 636 aa9.42□□□□□ -0.9
PDLIM5-215ENST00000511586 LINC00116Q8NCU8 138 aa9.42□□□□□ -0.9
PDLIM5-215ENST00000511586 PNISRQ8TF01 805 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-215ENST00000511586 SLC4A9Q96Q91 983 aa9.42□□□□□ -0.9
PDLIM5-215ENST00000511586 PDGFDQ9GZP0 370 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-215ENST00000511586 NEUROD2Q15784 382 aa9.41□□□□□ -0.9
PDLIM5-215ENST00000511586 RC3H1Q5TC82 1133 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-215ENST00000511586 VSIG10Q8N0Z9 540 aa9.41□□□□□ -0.9
PDLIM5-215ENST00000511586 FLAD1Q8NFF5 587 aa9.41□□□□□ -0.9
PDLIM5-215ENST00000511586 SPON1Q9HCB6 807 aa9.41□□□□□ -0.9
PDLIM5-215ENST00000511586 PNPLA7Q6ZV29 1317 aa9.4□□□□□ -0.9
PDLIM5-215ENST00000511586 MSH5O43196 834 aa9.4□□□□□ -0.9
PDLIM5-215ENST00000511586 SLC16A10Q8TF71 515 aa9.4□□□□□ -0.9
PDLIM5-215ENST00000511586 ZNF496Q96IT1 587 aaPredicted RBP9.4□□□□□ -0.9
PDLIM5-215ENST00000511586 FMNL2Q96PY5 1086 aa9.4□□□□□ -0.9
PDLIM5-215ENST00000511586 RRP7AQ9Y3A4 280 aaKnown RBP9.4□□□□□ -0.9
PDLIM5-215ENST00000511586 C5P01031 1676 aa9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 CNTNAP4Q9C0A0 1308 aa9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 APAF1O14727 1248 aa9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 GNPATO15228 680 aa9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 KCNQ3O43525 872 aa9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 PHF14O94880 888 aa9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 ZBTB7AO95365 584 aa9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 SSFA2P28290 1259 aa9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 DIEXFQ68CQ4 756 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 COL23A1Q86Y22 540 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 DNAJC10Q8IXB1 793 aa9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 THUMPD2Q9BTF0 503 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 TEX13AQ9BXU3 409 aaPredicted RBP9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 MTFR1LQ9H019 292 aa9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 RTCBQ9Y3I0 505 aaKnown RBP9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 ZNF831Q5JPB2 1677 aa9.39□□□□□ -0.91
PDLIM5-215ENST00000511586 KCPQ6ZWJ8 1503 aa9.38□□□□□ -0.91
PDLIM5-215ENST00000511586 RPS6KA4O75676 772 aa9.38□□□□□ -0.91
PDLIM5-215ENST00000511586 STARD3NLO95772 234 aa9.38□□□□□ -0.91
PDLIM5-215ENST00000511586 CYP19A1P11511 503 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-215ENST00000511586 CRKLP46109 303 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-215ENST00000511586 TRAPPC3LQ5T215 181 aa9.38□□□□□ -0.91
PDLIM5-215ENST00000511586 MIS18AQ9NYP9 233 aa9.38□□□□□ -0.91
PDLIM5-215ENST00000511586 TRIM35Q9UPQ4 493 aa9.38□□□□□ -0.91
PDLIM5-215ENST00000511586 ATF5Q9Y2D1 282 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-215ENST00000511586 C4BP0C0L5 1744 aa9.38□□□□□ -0.91
PDLIM5-215ENST00000511586 HEG1Q9ULI3 1381 aa9.37□□□□□ -0.91
PDLIM5-215ENST00000511586 SNRPA1P09661 255 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-215ENST00000511586 ADRA2BP18089 450 aa9.37□□□□□ -0.91
PDLIM5-215ENST00000511586 INTS5Q6P9B9 1019 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-215ENST00000511586 SMIM5Q71RC9 77 aa9.37□□□□□ -0.91
PDLIM5-215ENST00000511586 AMIGO3Q86WK7 504 aa9.37□□□□□ -0.91
PDLIM5-215ENST00000511586 CCDC87Q9NVE4 849 aa9.37□□□□□ -0.91
PDLIM5-215ENST00000511586 BABAM1Q9NWV8 329 aa9.37□□□□□ -0.91
PDLIM5-215ENST00000511586 TSPYL4Q9UJ04 414 aa9.37□□□□□ -0.91
PDLIM5-215ENST00000511586 VIRMAQ69YN4 1812 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-215ENST00000511586 TAF1LQ8IZX4 1826 aa9.37□□□□□ -0.91
PDLIM5-215ENST00000511586 FAM9BQ8IZU0 186 aa9.36□□□□□ -0.91
PDLIM5-215ENST00000511586 PPP1R1BQ9UD71 204 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-215ENST00000511586 SIPA1L3O60292 1781 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-215ENST00000511586 CASZ1Q86V15 1759 aa9.36□□□□□ -0.91
PDLIM5-215ENST00000511586 DLG5Q8TDM6 1919 aa9.35□□□□□ -0.91
PDLIM5-215ENST00000511586 CCER2I3L3R5 266 aa9.35□□□□□ -0.91
PDLIM5-215ENST00000511586 POLD1P28340 1107 aa9.35□□□□□ -0.91
PDLIM5-215ENST00000511586 RFC4P35249 363 aa9.35□□□□□ -0.91
PDLIM5-215ENST00000511586 PTGER2P43116 358 aa9.35□□□□□ -0.91
PDLIM5-215ENST00000511586 EIF4A1P60842 406 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-215ENST00000511586 CALD1Q05682 793 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-215ENST00000511586 QSER1Q2KHR3 1735 aa9.35□□□□□ -0.91
PDLIM5-215ENST00000511586 ARHGEF1Q92888 912 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms