RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, human

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN13-208	ENST00000511105	MEIOB	Q8N635	442 aa		7.54	□□□□□ -1.2
PTPN13-208	ENST00000511105	ZNF395	Q9H8N7	513 aa	Predicted RBP	7.54	□□□□□ -1.2
PTPN13-208	ENST00000511105	MTMR7	Q9Y216	660 aa		7.54	□□□□□ -1.2
PTPN13-208	ENST00000511105	EMILIN1	Q9Y6C2	1016 aa		7.54	□□□□□ -1.2
PTPN13-208	ENST00000511105	ACIN1	Q9UKV3	1341 aa	Known RBP	7.53	□□□□□ -1.2
PTPN13-208	ENST00000511105	UPP2	O95045	317 aa		7.53	□□□□□ -1.2
PTPN13-208	ENST00000511105	RELB	Q01201	579 aa		7.53	□□□□□ -1.2
PTPN13-208	ENST00000511105	DZIP3	Q86Y13	1208 aa	Known RBP	7.53	□□□□□ -1.2
PTPN13-208	ENST00000511105	DNMT3L	Q9UJW3	386 aa		7.53	□□□□□ -1.2
PTPN13-208	ENST00000511105	DISP1	Q96F81	1524 aa		7.52	□□□□□ -1.2
PTPN13-208	ENST00000511105	ADCY10	Q96PN6	1610 aa		7.52	□□□□□ -1.2
PTPN13-208	ENST00000511105	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	7.52	□□□□□ -1.21
PTPN13-208	ENST00000511105	ADD1	P35611	737 aa	Known RBP	7.52	□□□□□ -1.21
PTPN13-208	ENST00000511105	SLC16A10	Q8TF71	515 aa		7.52	□□□□□ -1.21
PTPN13-208	ENST00000511105	IQGAP2	Q13576	1575 aa		7.51	□□□□□ -1.21
PTPN13-208	ENST00000511105	HDGFL1	Q5TGJ6	251 aa		7.51	□□□□□ -1.21
PTPN13-208	ENST00000511105	PPP1R12C	Q9BZL4	782 aa		7.51	□□□□□ -1.21
PTPN13-208	ENST00000511105	UACA	Q9BZF9	1416 aa		7.51	□□□□□ -1.21
PTPN13-208	ENST00000511105	SOS2	Q07890	1332 aa	Predicted RBP	7.51	□□□□□ -1.21
PTPN13-208	ENST00000511105	PRX	Q9BXM0	1461 aa		7.5	□□□□□ -1.21
PTPN13-208	ENST00000511105		H3BM21	787 aa		7.5	□□□□□ -1.21
PTPN13-208	ENST00000511105	ERVH48-1	M5A8F1	160 aa		7.5	□□□□□ -1.21
PTPN13-208	ENST00000511105	GIGYF1	O75420	1035 aa	Predicted RBP	7.5	□□□□□ -1.21
PTPN13-208	ENST00000511105	CSB-PGBD3	P0DP91	1061 aa		7.5	□□□□□ -1.21
PTPN13-208	ENST00000511105	ZNF784	Q8NCA9	323 aa	Predicted RBP	7.5	□□□□□ -1.21
PTPN13-208	ENST00000511105	UCN2	Q96RP3	112 aa		7.5	□□□□□ -1.21
PTPN13-208	ENST00000511105	TSEN34	Q9BSV6	310 aa	Known RBP	7.5	□□□□□ -1.21
PTPN13-208	ENST00000511105	PGPEP1	Q9NXJ5	209 aa		7.5	□□□□□ -1.21
PTPN13-208	ENST00000511105	PCDHB9	Q9Y5E1	797 aa		7.5	□□□□□ -1.21
PTPN13-208	ENST00000511105	PLB1	Q6P1J6	1458 aa		7.49	□□□□□ -1.21
PTPN13-208	ENST00000511105	TSPOAP1	O95153	1857 aa		7.49	□□□□□ -1.21
PTPN13-208	ENST00000511105	FBXO45	P0C2W1	286 aa		7.49	□□□□□ -1.21
PTPN13-208	ENST00000511105	SOX11	P35716	441 aa		7.49	□□□□□ -1.21
PTPN13-208	ENST00000511105	CTSO	P43234	321 aa	Predicted RBP	7.49	□□□□□ -1.21
PTPN13-208	ENST00000511105	INSM2	Q96T92	566 aa	Predicted RBP	7.49	□□□□□ -1.21
PTPN13-208	ENST00000511105	ALG2	Q9H553	416 aa		7.49	□□□□□ -1.21
PTPN13-208	ENST00000511105	ASXL2	Q76L83	1435 aa		7.49	□□□□□ -1.21
PTPN13-208	ENST00000511105	ZC3H4	Q9UPT8	1303 aa	Known RBP	7.49	□□□□□ -1.21
PTPN13-208	ENST00000511105	TTLL8	A6PVC2	850 aa		7.48	□□□□□ -1.21
PTPN13-208	ENST00000511105	PPFIA3	O75145	1194 aa		7.48	□□□□□ -1.21
PTPN13-208	ENST00000511105		Q6ZVU0	165 aa		7.48	□□□□□ -1.21
PTPN13-208	ENST00000511105	CYLD	Q9NQC7	956 aa		7.48	□□□□□ -1.21
PTPN13-208	ENST00000511105	ABCC10	Q5T3U5	1492 aa		7.48	□□□□□ -1.21
PTPN13-208	ENST00000511105	PALM3	A6NDB9	673 aa	Predicted RBP	7.47	□□□□□ -1.21
PTPN13-208	ENST00000511105	VAC14	Q08AM6	782 aa		7.47	□□□□□ -1.21
PTPN13-208	ENST00000511105	IRF7	Q92985	503 aa		7.47	□□□□□ -1.21
PTPN13-208	ENST00000511105	GPSM3	Q9Y4H4	160 aa		7.47	□□□□□ -1.21
PTPN13-208	ENST00000511105	KIF13A	Q9H1H9	1805 aa		7.47	□□□□□ -1.21
PTPN13-208	ENST00000511105	LOC105371045	A0A1W2PR82	267 aa		7.46	□□□□□ -1.22
PTPN13-208	ENST00000511105	ZBBX	A8MT70	800 aa		7.46	□□□□□ -1.22
PTPN13-208	ENST00000511105	ATG7	O95352	703 aa		7.46	□□□□□ -1.22
PTPN13-208	ENST00000511105	DHX9	Q08211	1270 aa	Known RBP	7.46	□□□□□ -1.22
PTPN13-208	ENST00000511105	POLM	Q9NP87	494 aa	Predicted RBP	7.46	□□□□□ -1.22
PTPN13-208	ENST00000511105	UGGT2	Q9NYU1	1516 aa		7.46	□□□□□ -1.22
PTPN13-208	ENST00000511105	KIAA0556	O60303	1618 aa		7.45	□□□□□ -1.22
PTPN13-208	ENST00000511105	FHOD3	Q2V2M9	1422 aa		7.45	□□□□□ -1.22
PTPN13-208	ENST00000511105	TMEM88B	A6NKF7	163 aa		7.45	□□□□□ -1.22
PTPN13-208	ENST00000511105	LILRA1	O75019	489 aa		7.45	□□□□□ -1.22
PTPN13-208	ENST00000511105	PTS	Q03393	145 aa		7.45	□□□□□ -1.22
PTPN13-208	ENST00000511105	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.45	□□□□□ -1.22
PTPN13-208	ENST00000511105	GPR161	Q8N6U8	529 aa	Known RBP	7.45	□□□□□ -1.22
PTPN13-208	ENST00000511105	KDF1	Q8NAX2	398 aa	Predicted RBP	7.45	□□□□□ -1.22
PTPN13-208	ENST00000511105	PNMA1	Q8ND90	353 aa		7.45	□□□□□ -1.22
PTPN13-208	ENST00000511105	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.45	□□□□□ -1.22
PTPN13-208	ENST00000511105	CDV3	Q9UKY7	258 aa	Known RBP	7.45	□□□□□ -1.22
PTPN13-208	ENST00000511105	ABCC2	Q92887	1545 aa		7.45	□□□□□ -1.22
PTPN13-208	ENST00000511105	FAM181B	A6NEQ2	426 aa		7.44	□□□□□ -1.22
PTPN13-208	ENST00000511105	SPINT1	O43278	529 aa		7.44	□□□□□ -1.22
PTPN13-208	ENST00000511105	RFX1	P22670	979 aa		7.44	□□□□□ -1.22
PTPN13-208	ENST00000511105	LOR	P23490	312 aa	Predicted RBP	7.44	□□□□□ -1.22
PTPN13-208	ENST00000511105	NBPF20	Q3BBV1	942 aa		7.44	□□□□□ -1.22
PTPN13-208	ENST00000511105	SND1	Q7KZF4	910 aa	Known RBP eCLIP	7.44	□□□□□ -1.22
PTPN13-208	ENST00000511105	AMOTL2	Q9Y2J4	779 aa		7.44	□□□□□ -1.22
PTPN13-208	ENST00000511105	MAFB	Q9Y5Q3	323 aa	Predicted RBP	7.44	□□□□□ -1.22
PTPN13-208	ENST00000511105	DIP2B	Q9P265	1576 aa		7.43	□□□□□ -1.22
PTPN13-208	ENST00000511105	SUZ12	Q15022	739 aa	Known RBP	7.43	□□□□□ -1.22
PTPN13-208	ENST00000511105	IVNS1ABP	Q9Y6Y0	642 aa		7.43	□□□□□ -1.22
PTPN13-208	ENST00000511105	GOLGA3	Q08378	1498 aa		7.43	□□□□□ -1.22
PTPN13-208	ENST00000511105	CTTNBP2	Q8WZ74	1663 aa		7.42	□□□□□ -1.22
PTPN13-208	ENST00000511105	ESPN	B1AK53	854 aa		7.42	□□□□□ -1.22
PTPN13-208	ENST00000511105	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	7.42	□□□□□ -1.22
PTPN13-208	ENST00000511105	GNE	Q9Y223	722 aa	Known RBP	7.42	□□□□□ -1.22
PTPN13-208	ENST00000511105	MAPKBP1	O60336	1514 aa		7.42	□□□□□ -1.22
PTPN13-208	ENST00000511105	RHOQ	P17081	205 aa		7.41	□□□□□ -1.22
PTPN13-208	ENST00000511105	LMOD1	P29536	600 aa	Predicted RBP	7.41	□□□□□ -1.22
PTPN13-208	ENST00000511105	RBM25	P49756	843 aa	Known RBP	7.41	□□□□□ -1.22
PTPN13-208	ENST00000511105	CCDC27	Q2M243	656 aa		7.41	□□□□□ -1.22
PTPN13-208	ENST00000511105	PRICKLE2	Q7Z3G6	844 aa		7.41	□□□□□ -1.22
PTPN13-208	ENST00000511105	NPAS3	Q8IXF0	933 aa		7.41	□□□□□ -1.22
PTPN13-208	ENST00000511105	CCDC155	Q8N6L0	562 aa		7.41	□□□□□ -1.22
PTPN13-208	ENST00000511105	UHRF1BP1L	A0JNW5	1464 aa		7.41	□□□□□ -1.22
PTPN13-208	ENST00000511105	ATP10B	O94823	1461 aa		7.41	□□□□□ -1.22
PTPN13-208	ENST00000511105	COL17A1	Q9UMD9	1497 aa	Predicted RBP	7.41	□□□□□ -1.22
PTPN13-208	ENST00000511105	EPRS	P07814	1512 aa	Known RBP	7.41	□□□□□ -1.22
PTPN13-208	ENST00000511105	KDM5B	Q9UGL1	1544 aa		7.41	□□□□□ -1.22
PTPN13-208	ENST00000511105	ZCCHC11	Q5TAX3	1644 aa	Known RBP	7.41	□□□□□ -1.22
PTPN13-208	ENST00000511105	PLEKHD1	A6NEE1	506 aa		7.4	□□□□□ -1.22
PTPN13-208	ENST00000511105	RAPGEF3	O95398	923 aa		7.4	□□□□□ -1.22
PTPN13-208	ENST00000511105	ADH1A	P07327	375 aa		7.4	□□□□□ -1.22
PTPN13-208	ENST00000511105	PTGIR	P43119	386 aa		7.4	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms