RNA–Protein interactions for RNA: ENST00000510598.5

LEMD2-208, Transcript of LEM domain containing 2, humanhuman

TSL 1 (best)

Gene LEMD2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-208ENST00000510598 SMIM5Q71RC9 77 aa12.57□□□□□ -0.4
LEMD2-208ENST00000510598 SPG7Q9UQ90 795 aa12.57□□□□□ -0.4
LEMD2-208ENST00000510598 GNPATO15228 680 aa12.56□□□□□ -0.4
LEMD2-208ENST00000510598 TOMM70O94826 608 aa12.56□□□□□ -0.4
LEMD2-208ENST00000510598 TGFB2P61812 414 aa12.56□□□□□ -0.4
LEMD2-208ENST00000510598 TMF1P82094 1093 aa12.56□□□□□ -0.4
LEMD2-208ENST00000510598 DNAJC5GQ8N7S2 189 aa12.56□□□□□ -0.4
LEMD2-208ENST00000510598 EMILIN1Q9Y6C2 1016 aa12.56□□□□□ -0.4
LEMD2-208ENST00000510598 TNRC6CQ9HCJ0 1690 aaKnown RBP12.56□□□□□ -0.4
LEMD2-208ENST00000510598 WASHC2AQ641Q2 1341 aa12.56□□□□□ -0.4
LEMD2-208ENST00000510598 MMP10P09238 476 aa12.55□□□□□ -0.4
LEMD2-208ENST00000510598 TMOD3Q9NYL9 352 aa12.55□□□□□ -0.4
LEMD2-208ENST00000510598 ADAMTS7Q9UKP4 1686 aa12.54□□□□□ -0.4
LEMD2-208ENST00000510598 PHKG2P15735 406 aa12.54□□□□□ -0.4
LEMD2-208ENST00000510598 WWC3Q9ULE0 1092 aa12.54□□□□□ -0.4
LEMD2-208ENST00000510598 ASAP1Q9ULH1 1129 aa12.54□□□□□ -0.4
LEMD2-208ENST00000510598 ADRA2BP18089 450 aa12.53□□□□□ -0.4
LEMD2-208ENST00000510598 ATP6V1AP38606 617 aa12.53□□□□□ -0.4
LEMD2-208ENST00000510598 CDCA8Q53HL2 280 aa12.53□□□□□ -0.4
LEMD2-208ENST00000510598 IFNL2Q8IZJ0 200 aa12.53□□□□□ -0.4
LEMD2-208ENST00000510598 NLGN1Q8N2Q7 840 aa12.53□□□□□ -0.4
LEMD2-208ENST00000510598 EYA1Q99502 592 aa12.53□□□□□ -0.4
LEMD2-208ENST00000510598 CARD14Q9BXL6 1004 aa12.53□□□□□ -0.4
LEMD2-208ENST00000510598 ATG3Q9NT62 314 aa12.53□□□□□ -0.4
LEMD2-208ENST00000510598 CNTNAP4Q9C0A0 1308 aa12.53□□□□□ -0.4
LEMD2-208ENST00000510598 TJP1Q07157 1748 aa12.53□□□□□ -0.4
LEMD2-208ENST00000510598 DLEC1Q9Y238 1755 aa12.52□□□□□ -0.41
LEMD2-208ENST00000510598 RC3H1Q5TC82 1133 aaKnown RBP12.52□□□□□ -0.41
LEMD2-208ENST00000510598 RBM46Q8TBY0 533 aaKnown RBP12.51□□□□□ -0.41
LEMD2-208ENST00000510598 SLC4A9Q96Q91 983 aa12.51□□□□□ -0.41
LEMD2-208ENST00000510598 RTCBQ9Y3I0 505 aaKnown RBP12.51□□□□□ -0.41
LEMD2-208ENST00000510598 SCN11AQ9UI33 1791 aa12.51□□□□□ -0.41
LEMD2-208ENST00000510598 VIRMAQ69YN4 1812 aaKnown RBP12.51□□□□□ -0.41
LEMD2-208ENST00000510598 GYS1P13807 737 aa12.5□□□□□ -0.41
LEMD2-208ENST00000510598 TRAPPC3LQ5T215 181 aa12.5□□□□□ -0.41
LEMD2-208ENST00000510598 NMRK2Q9NPI5 230 aa12.5□□□□□ -0.41
LEMD2-208ENST00000510598 CCDC87Q9NVE4 849 aa12.5□□□□□ -0.41
LEMD2-208ENST00000510598 BCS1LQ9Y276 419 aa12.5□□□□□ -0.41
LEMD2-208ENST00000510598 AFDNP55196 1824 aaKnown RBP12.49□□□□□ -0.41
LEMD2-208ENST00000510598 NRXN2Q9P2S2 1712 aa12.49□□□□□ -0.41
LEMD2-208ENST00000510598 KDM6AO15550 1401 aaPredicted RBP12.49□□□□□ -0.41
LEMD2-208ENST00000510598 A0A0G2JLW4 131 aa12.49□□□□□ -0.41
LEMD2-208ENST00000510598 ERVV-2B6SEH9 535 aa12.49□□□□□ -0.41
LEMD2-208ENST00000510598 RPS6KA4O75676 772 aa12.49□□□□□ -0.41
LEMD2-208ENST00000510598 DPEP1P16444 411 aa12.49□□□□□ -0.41
LEMD2-208ENST00000510598 KCNA3P22001 575 aa12.49□□□□□ -0.41
LEMD2-208ENST00000510598 JMYQ8N9B5 988 aa12.49□□□□□ -0.41
LEMD2-208ENST00000510598 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
LEMD2-208ENST00000510598 ARHGEF1Q92888 912 aaKnown RBP12.48□□□□□ -0.41
LEMD2-208ENST00000510598 POLKQ9UBT6 870 aa12.48□□□□□ -0.41
LEMD2-208ENST00000510598 KCPQ6ZWJ8 1503 aa12.47□□□□□ -0.41
LEMD2-208ENST00000510598 FCHSD2O94868 740 aa12.47□□□□□ -0.41
LEMD2-208ENST00000510598 FSTL1Q12841 308 aa12.47□□□□□ -0.41
LEMD2-208ENST00000510598 ARHGAP27Q6ZUM4 889 aa12.47□□□□□ -0.41
LEMD2-208ENST00000510598 KLRG1Q96E93 195 aa12.47□□□□□ -0.41
LEMD2-208ENST00000510598 DCAF5Q96JK2 942 aa12.47□□□□□ -0.41
LEMD2-208ENST00000510598 TIAM2Q8IVF5 1701 aa12.46□□□□□ -0.41
LEMD2-208ENST00000510598 PPM1GO15355 546 aaPredicted RBP12.46□□□□□ -0.41
LEMD2-208ENST00000510598 HSP90AB1P08238 724 aaKnown RBP12.46□□□□□ -0.41
LEMD2-208ENST00000510598 EIF4A2Q14240 407 aaKnown RBP12.46□□□□□ -0.41
LEMD2-208ENST00000510598 C9orf131Q5VYM1 1079 aa12.46□□□□□ -0.41
LEMD2-208ENST00000510598 PARP3Q9Y6F1 533 aa12.46□□□□□ -0.41
LEMD2-208ENST00000510598 RFC4P35249 363 aa12.45□□□□□ -0.42
LEMD2-208ENST00000510598 DICER1Q9UPY3 1922 aaKnown RBP12.45□□□□□ -0.42
LEMD2-208ENST00000510598 KDM2BQ8NHM5 1336 aa12.44□□□□□ -0.42
LEMD2-208ENST00000510598 USP42Q9H9J4 1324 aaKnown RBP12.44□□□□□ -0.42
LEMD2-208ENST00000510598 ZC3H4Q9UPT8 1303 aaKnown RBP12.44□□□□□ -0.42
LEMD2-208ENST00000510598 PIM2Q9P1W9 311 aa12.44□□□□□ -0.42
LEMD2-208ENST00000510598 DDR1Q08345 913 aa12.43□□□□□ -0.42
LEMD2-208ENST00000510598 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
LEMD2-208ENST00000510598 MRC1P22897 1456 aa12.42□□□□□ -0.42
LEMD2-208ENST00000510598 CRKLP46109 303 aaKnown RBP12.42□□□□□ -0.42
LEMD2-208ENST00000510598 AMOTQ4VCS5 1084 aa12.42□□□□□ -0.42
LEMD2-208ENST00000510598 DALRD3Q5D0E6 543 aaKnown RBP12.42□□□□□ -0.42
LEMD2-208ENST00000510598 C16orf71Q8IYS4 520 aaPredicted RBP12.42□□□□□ -0.42
LEMD2-208ENST00000510598 UBR2Q8IWV8 1755 aa12.41□□□□□ -0.42
LEMD2-208ENST00000510598 FKBP8Q14318 412 aa12.41□□□□□ -0.42
LEMD2-208ENST00000510598 PLEKHO1Q53GL0 409 aaPredicted RBP12.41□□□□□ -0.42
LEMD2-208ENST00000510598 RNF181Q9P0P0 153 aa12.41□□□□□ -0.42
LEMD2-208ENST00000510598 FER1L6Q2WGJ9 1857 aa12.4□□□□□ -0.42
LEMD2-208ENST00000510598 POLRMTO00411 1230 aaKnown RBP12.4□□□□□ -0.42
LEMD2-208ENST00000510598 TM4SF1P30408 202 aa12.4□□□□□ -0.42
LEMD2-208ENST00000510598 CABP4P57796 275 aa12.4□□□□□ -0.42
LEMD2-208ENST00000510598 HTRA3P83110 453 aa12.4□□□□□ -0.42
LEMD2-208ENST00000510598 COL13A1Q5TAT6 717 aaPredicted RBP12.4□□□□□ -0.42
LEMD2-208ENST00000510598 ZNF530Q6P9A1 599 aaPredicted RBP12.4□□□□□ -0.42
LEMD2-208ENST00000510598 SRP68Q9UHB9 627 aaKnown RBP12.4□□□□□ -0.42
LEMD2-208ENST00000510598 ANKRD31Q8N7Z5 1873 aa12.4□□□□□ -0.42
LEMD2-208ENST00000510598 SMC1BQ8NDV3 1235 aa12.39□□□□□ -0.43
LEMD2-208ENST00000510598 CHRNA5P30532 468 aa12.38□□□□□ -0.43
LEMD2-208ENST00000510598 INTS5Q6P9B9 1019 aaKnown RBP12.38□□□□□ -0.43
LEMD2-208ENST00000510598 RRAGCQ9HB90 399 aa12.38□□□□□ -0.43
LEMD2-208ENST00000510598 ARFGEF2Q9Y6D5 1785 aa12.38□□□□□ -0.43
LEMD2-208ENST00000510598 SOS1Q07889 1333 aaPredicted RBP12.37□□□□□ -0.43
LEMD2-208ENST00000510598 PTCD1O75127 700 aaKnown RBP12.37□□□□□ -0.43
LEMD2-208ENST00000510598 MTHFSP49914 203 aa12.37□□□□□ -0.43
LEMD2-208ENST00000510598 SCN7AQ01118 1682 aa12.37□□□□□ -0.43
LEMD2-208ENST00000510598 PCNTO95613 3336 aa12.37□□□□□ -0.43
LEMD2-208ENST00000510598 COL11A2P13942 1736 aaPredicted RBP12.37□□□□□ -0.43
LEMD2-208ENST00000510598 PRELPP51888 382 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms