RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 NKTRP30414 1462 aaKnown RBP12.38□□□□□ -0.43
NEK1-206ENST00000510533 KIF18AQ8NI77 898 aa12.38□□□□□ -0.43
NEK1-206ENST00000510533 THEMISQ8N1K5 641 aaPredicted RBP12.38□□□□□ -0.43
NEK1-206ENST00000510533 CRACR2AQ9BSW2 395 aa12.38□□□□□ -0.43
NEK1-206ENST00000510533 ABCC11Q96J66 1382 aa12.37□□□□□ -0.43
NEK1-206ENST00000510533 JAKMIP3Q5VZ66 844 aa12.37□□□□□ -0.43
NEK1-206ENST00000510533 THUMPD2Q9BTF0 503 aaKnown RBP12.37□□□□□ -0.43
NEK1-206ENST00000510533 SSFA2P28290 1259 aa12.37□□□□□ -0.43
NEK1-206ENST00000510533 TBC1D2Q9BYX2 928 aa12.37□□□□□ -0.43
NEK1-206ENST00000510533 TAF3Q5VWG9 929 aa12.37□□□□□ -0.43
NEK1-206ENST00000510533 TNPO1Q92973 898 aaKnown RBP12.37□□□□□ -0.43
NEK1-206ENST00000510533 MIS18AQ9NYP9 233 aa12.36□□□□□ -0.43
NEK1-206ENST00000510533 EZRP15311 586 aaKnown RBP12.36□□□□□ -0.43
NEK1-206ENST00000510533 PIBF1Q8WXW3 757 aa12.36□□□□□ -0.43
NEK1-206ENST00000510533 CLIP2Q9UDT6 1046 aa12.36□□□□□ -0.43
NEK1-206ENST00000510533 HECW1Q76N89 1606 aa12.36□□□□□ -0.43
NEK1-206ENST00000510533 KIF5CO60282 957 aa12.36□□□□□ -0.43
NEK1-206ENST00000510533 SPA17Q15506 151 aa12.36□□□□□ -0.43
NEK1-206ENST00000510533 MCM10Q7L590 875 aa12.36□□□□□ -0.43
NEK1-206ENST00000510533 SKAP1Q86WV1 359 aa12.36□□□□□ -0.43
NEK1-206ENST00000510533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.36□□□□□ -0.43
NEK1-206ENST00000510533 SPINK5Q9NQ38 1064 aaPredicted RBP12.35□□□□□ -0.43
NEK1-206ENST00000510533 AKAP2Q9Y2D5 859 aa12.35□□□□□ -0.43
NEK1-206ENST00000510533 CTAGE5O15320 804 aa12.35□□□□□ -0.43
NEK1-206ENST00000510533 TOP1P11387 765 aaKnown RBP12.35□□□□□ -0.43
NEK1-206ENST00000510533 CASQ1P31415 396 aa12.35□□□□□ -0.43
NEK1-206ENST00000510533 IGHMBP2P38935 993 aaKnown RBP12.35□□□□□ -0.43
NEK1-206ENST00000510533 XPCQ01831 940 aaPredicted RBP12.35□□□□□ -0.43
NEK1-206ENST00000510533 URI1O94763 535 aaPredicted RBP12.35□□□□□ -0.43
NEK1-206ENST00000510533 C8orf76Q96K31 380 aa12.35□□□□□ -0.43
NEK1-206ENST00000510533 BOLA2Q9H3K6 86 aa12.35□□□□□ -0.43
NEK1-206ENST00000510533 LIMCH1Q9UPQ0 1083 aa12.35□□□□□ -0.43
NEK1-206ENST00000510533 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
NEK1-206ENST00000510533 HMGB1P09429 215 aaKnown RBP12.34□□□□□ -0.43
NEK1-206ENST00000510533 GBP2P32456 591 aaPredicted RBP12.34□□□□□ -0.43
NEK1-206ENST00000510533 ZNF76P36508 570 aa12.34□□□□□ -0.43
NEK1-206ENST00000510533 CCDC85AQ96PX6 553 aaPredicted RBP12.34□□□□□ -0.43
NEK1-206ENST00000510533 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
NEK1-206ENST00000510533 MAP9Q49MG5 647 aa12.34□□□□□ -0.43
NEK1-206ENST00000510533 METTL24Q5JXM2 366 aa12.34□□□□□ -0.43
NEK1-206ENST00000510533 LRPPRCP42704 1394 aaKnown RBP12.34□□□□□ -0.43
NEK1-206ENST00000510533 NUDT16Q96DE0 195 aaKnown RBP12.34□□□□□ -0.43
NEK1-206ENST00000510533 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
NEK1-206ENST00000510533 SUPT6HQ7KZ85 1726 aaKnown RBP12.34□□□□□ -0.43
NEK1-206ENST00000510533 CBX1P83916 185 aa12.34□□□□□ -0.43
NEK1-206ENST00000510533 KIF4BQ2VIQ3 1234 aa12.34□□□□□ -0.43
NEK1-206ENST00000510533 LARP1Q6PKG0 1096 aaKnown RBP12.34□□□□□ -0.43
NEK1-206ENST00000510533 USP25Q9UHP3 1055 aa12.34□□□□□ -0.43
NEK1-206ENST00000510533 CCDC61Q9Y6R9 512 aa12.34□□□□□ -0.43
NEK1-206ENST00000510533 RBM5P52756 815 aaKnown RBP eCLIP12.33□□□□□ -0.43
NEK1-206ENST00000510533 FKBP15Q5T1M5 1219 aa12.33□□□□□ -0.43
NEK1-206ENST00000510533 CGNQ9P2M7 1197 aaKnown RBP12.33□□□□□ -0.43
NEK1-206ENST00000510533 CCDC196A0A1B0GTZ2 297 aa12.33□□□□□ -0.44
NEK1-206ENST00000510533 SHTN1A0MZ66 631 aa12.33□□□□□ -0.44
NEK1-206ENST00000510533 KLHL10Q6JEL2 608 aa12.33□□□□□ -0.44
NEK1-206ENST00000510533 NAIPQ13075 1403 aa12.33□□□□□ -0.44
NEK1-206ENST00000510533 NEMFO60524 1076 aa12.33□□□□□ -0.44
NEK1-206ENST00000510533 TNNT1P13805 278 aa12.33□□□□□ -0.44
NEK1-206ENST00000510533 MCM3P25205 808 aa12.33□□□□□ -0.44
NEK1-206ENST00000510533 USP5P45974 858 aa12.33□□□□□ -0.44
NEK1-206ENST00000510533 DDX19AQ9NUU7 478 aaKnown RBP12.33□□□□□ -0.44
NEK1-206ENST00000510533 ABCF2Q9UG63 623 aa12.33□□□□□ -0.44
NEK1-206ENST00000510533 PPP1R12BO60237 982 aaPredicted RBP12.33□□□□□ -0.44
NEK1-206ENST00000510533 PHAXQ9H814 394 aaKnown RBP12.33□□□□□ -0.44
NEK1-206ENST00000510533 INCENPQ9NQS7 918 aa12.33□□□□□ -0.44
NEK1-206ENST00000510533 IFIT1P09914 478 aaKnown RBP12.32□□□□□ -0.44
NEK1-206ENST00000510533 ZSCAN29Q8IWY8 852 aaPredicted RBP12.32□□□□□ -0.44
NEK1-206ENST00000510533 PRDM11Q9NQV5 511 aa12.32□□□□□ -0.44
NEK1-206ENST00000510533 CKAP2LQ8IYA6 745 aa12.32□□□□□ -0.44
NEK1-206ENST00000510533 DHX37Q8IY37 1157 aaKnown RBP12.32□□□□□ -0.44
NEK1-206ENST00000510533 SLC26A8Q96RN1 970 aa12.32□□□□□ -0.44
NEK1-206ENST00000510533 DESP17661 470 aa12.31□□□□□ -0.44
NEK1-206ENST00000510533 TAF7Q15545 349 aaPredicted RBP12.31□□□□□ -0.44
NEK1-206ENST00000510533 ZNF287Q9HBT7 754 aa12.31□□□□□ -0.44
NEK1-206ENST00000510533 GUCY1B3Q02153 619 aa12.31□□□□□ -0.44
NEK1-206ENST00000510533 TSG101Q99816 390 aa12.31□□□□□ -0.44
NEK1-206ENST00000510533 NAPBQ9H115 298 aa12.31□□□□□ -0.44
NEK1-206ENST00000510533 STARD3NLO95772 234 aa12.31□□□□□ -0.44
NEK1-206ENST00000510533 MCM5P33992 734 aa12.31□□□□□ -0.44
NEK1-206ENST00000510533 KCNH5Q8NCM2 988 aa12.31□□□□□ -0.44
NEK1-206ENST00000510533 SEC63Q9UGP8 760 aaKnown RBP12.31□□□□□ -0.44
NEK1-206ENST00000510533 SSR1P43307 286 aaKnown RBP12.3□□□□□ -0.44
NEK1-206ENST00000510533 GSDMDP57764 484 aa12.3□□□□□ -0.44
NEK1-206ENST00000510533 CACNA2D4Q7Z3S7 1137 aa12.3□□□□□ -0.44
NEK1-206ENST00000510533 MINDY4BA8MYZ0 360 aa12.3□□□□□ -0.44
NEK1-206ENST00000510533 C11orf95C9JLR9 678 aaPredicted RBP12.3□□□□□ -0.44
NEK1-206ENST00000510533 CETN2P41208 172 aa12.3□□□□□ -0.44
NEK1-206ENST00000510533 MYD88Q99836 296 aa12.3□□□□□ -0.44
NEK1-206ENST00000510533 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
NEK1-206ENST00000510533 TRIM27P14373 513 aa12.3□□□□□ -0.44
NEK1-206ENST00000510533 C16orf45Q96MC5 204 aaPredicted RBP12.3□□□□□ -0.44
NEK1-206ENST00000510533 CCDC8Q9H0W5 538 aaPredicted RBP12.3□□□□□ -0.44
NEK1-206ENST00000510533 PRDM10Q9NQV6 1147 aa12.3□□□□□ -0.44
NEK1-206ENST00000510533 F6X3S4 739 aa12.3□□□□□ -0.44
NEK1-206ENST00000510533 BMP2KLQ5H9B9 411 aa12.3□□□□□ -0.44
NEK1-206ENST00000510533 FSIP1Q8NA03 581 aa12.3□□□□□ -0.44
NEK1-206ENST00000510533 CNNM3Q8NE01 707 aa12.3□□□□□ -0.44
NEK1-206ENST00000510533 TRMT1Q9NXH9 659 aaKnown RBP12.3□□□□□ -0.44
NEK1-206ENST00000510533 MATR3P43243 847 aaKnown RBP eCLIP12.29□□□□□ -0.441e-6■■■■■ 28.3
NEK1-206ENST00000510533 DYDC1Q8WWB3 177 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms