RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 ITPK1Q13572 414 aa15.68■□□□□ 0.1
HMGXB3-203ENST00000510472 LY75O60449 1722 aa15.68■□□□□ 0.1
HMGXB3-203ENST00000510472 ITGB4P16144 1822 aa15.67■□□□□ 0.1
HMGXB3-203ENST00000510472 CEMIPQ8WUJ3 1361 aa15.66■□□□□ 0.1
HMGXB3-203ENST00000510472 MAP3K5Q99683 1374 aa15.66■□□□□ 0.1
HMGXB3-203ENST00000510472 PNPLA7Q6ZV29 1317 aa15.66■□□□□ 0.1
HMGXB3-203ENST00000510472 MRC1P22897 1456 aa15.65■□□□□ 0.1
HMGXB3-203ENST00000510472 LINC00116Q8NCU8 138 aa15.65■□□□□ 0.1
HMGXB3-203ENST00000510472 ADAMTS7Q9UKP4 1686 aa15.64■□□□□ 0.09
HMGXB3-203ENST00000510472 HTATSF1O43719 755 aaKnown RBP15.64■□□□□ 0.09
HMGXB3-203ENST00000510472 ATP6V1AP38606 617 aa15.64■□□□□ 0.09
HMGXB3-203ENST00000510472 SPON1Q9HCB6 807 aa15.64■□□□□ 0.09
HMGXB3-203ENST00000510472 TFCP2L1Q9NZI6 479 aa15.64■□□□□ 0.09
HMGXB3-203ENST00000510472 PTGER2P43116 358 aa15.63■□□□□ 0.09
HMGXB3-203ENST00000510472 AMIGO3Q86WK7 504 aa15.63■□□□□ 0.09
HMGXB3-203ENST00000510472 SGIP1Q9BQI5 828 aa15.63■□□□□ 0.09
HMGXB3-203ENST00000510472 MTFR1LQ9H019 292 aa15.63■□□□□ 0.09
HMGXB3-203ENST00000510472 PTCD1O75127 700 aaKnown RBP15.62■□□□□ 0.09
HMGXB3-203ENST00000510472 ZBTB7AO95365 584 aa15.62■□□□□ 0.09
HMGXB3-203ENST00000510472 SLC39A6Q13433 755 aa15.62■□□□□ 0.09
HMGXB3-203ENST00000510472 COL23A1Q86Y22 540 aaPredicted RBP15.62■□□□□ 0.09
HMGXB3-203ENST00000510472 SLC16A10Q8TF71 515 aa15.62■□□□□ 0.09
HMGXB3-203ENST00000510472 RBM42Q9BTD8 480 aaKnown RBP15.62■□□□□ 0.09
HMGXB3-203ENST00000510472 PNNQ9H307 717 aaKnown RBP15.62■□□□□ 0.09
HMGXB3-203ENST00000510472 LRP5O75197 1615 aa15.61■□□□□ 0.09
HMGXB3-203ENST00000510472 RC3H1Q5TC82 1133 aaKnown RBP15.61■□□□□ 0.09
HMGXB3-203ENST00000510472 CASZ1Q86V15 1759 aa15.61■□□□□ 0.09
HMGXB3-203ENST00000510472 SCN11AQ9UI33 1791 aa15.6■□□□□ 0.09
HMGXB3-203ENST00000510472 NFE2L2Q16236 605 aa15.6■□□□□ 0.09
HMGXB3-203ENST00000510472 ADAMTS8Q9UP79 889 aa15.6■□□□□ 0.09
HMGXB3-203ENST00000510472 ATF5Q9Y2D1 282 aaPredicted RBP15.6■□□□□ 0.09
HMGXB3-203ENST00000510472 TEFQ10587 303 aa15.59■□□□□ 0.09
HMGXB3-203ENST00000510472 DCTN1Q14203 1278 aa15.59■□□□□ 0.09
HMGXB3-203ENST00000510472 MCM10Q7L590 875 aa15.59■□□□□ 0.09
HMGXB3-203ENST00000510472 FLAD1Q8NFF5 587 aa15.59■□□□□ 0.09
HMGXB3-203ENST00000510472 AK7Q96M32 723 aa15.59■□□□□ 0.09
HMGXB3-203ENST00000510472 SSFA2P28290 1259 aa15.58■□□□□ 0.08
HMGXB3-203ENST00000510472 CCDC184Q52MB2 194 aa15.58■□□□□ 0.08
HMGXB3-203ENST00000510472 ZNF790Q6PG37 636 aa15.58■□□□□ 0.08
HMGXB3-203ENST00000510472 SMIM5Q71RC9 77 aa15.58■□□□□ 0.08
HMGXB3-203ENST00000510472 VSIG10Q8N0Z9 540 aa15.58■□□□□ 0.08
HMGXB3-203ENST00000510472 RTF1Q92541 710 aaKnown RBP15.58■□□□□ 0.08
HMGXB3-203ENST00000510472 CNTNAP4Q9C0A0 1308 aa15.58■□□□□ 0.08
HMGXB3-203ENST00000510472 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.57■□□□□ 0.08
HMGXB3-203ENST00000510472 NEFMP07197 916 aa15.57■□□□□ 0.08
HMGXB3-203ENST00000510472 ZNF831Q5JPB2 1677 aa15.57■□□□□ 0.08
HMGXB3-203ENST00000510472 KCNQ3O43525 872 aa15.56■□□□□ 0.08
HMGXB3-203ENST00000510472 RPS6KA4O75676 772 aa15.56■□□□□ 0.08
HMGXB3-203ENST00000510472 INTS5Q6P9B9 1019 aaKnown RBP15.56■□□□□ 0.08
HMGXB3-203ENST00000510472 DNAJC10Q8IXB1 793 aa15.56■□□□□ 0.08
HMGXB3-203ENST00000510472 ZNF496Q96IT1 587 aaPredicted RBP15.56■□□□□ 0.08
HMGXB3-203ENST00000510472 KCPQ6ZWJ8 1503 aa15.56■□□□□ 0.08
HMGXB3-203ENST00000510472 C4BP0C0L5 1744 aa15.55■□□□□ 0.08
HMGXB3-203ENST00000510472 BTBD11A6QL63 1104 aa15.55■□□□□ 0.08
HMGXB3-203ENST00000510472 GNPATO15228 680 aa15.55■□□□□ 0.08
HMGXB3-203ENST00000510472 CYP19A1P11511 503 aaPredicted RBP15.55■□□□□ 0.08
HMGXB3-203ENST00000510472 TMPOP42166 694 aaKnown RBP15.55■□□□□ 0.08
HMGXB3-203ENST00000510472 CRKLP46109 303 aaKnown RBP15.55■□□□□ 0.08
HMGXB3-203ENST00000510472 WDR43Q15061 677 aaKnown RBP eCLIP15.55■□□□□ 0.08
HMGXB3-203ENST00000510472 TAF7Q15545 349 aaPredicted RBP15.55■□□□□ 0.08
HMGXB3-203ENST00000510472 RUNDC1Q96C34 613 aa15.55■□□□□ 0.08
HMGXB3-203ENST00000510472 C5P01031 1676 aa15.54■□□□□ 0.08
HMGXB3-203ENST00000510472 MAPK8IP3Q9UPT6 1336 aa15.54■□□□□ 0.08
HMGXB3-203ENST00000510472 ANP32CO43423 234 aa15.54■□□□□ 0.08
HMGXB3-203ENST00000510472 RTCBQ9Y3I0 505 aaKnown RBP15.54■□□□□ 0.08
HMGXB3-203ENST00000510472 TAF1LQ8IZX4 1826 aa15.54■□□□□ 0.08
HMGXB3-203ENST00000510472 QSER1Q2KHR3 1735 aa15.54■□□□□ 0.08
HMGXB3-203ENST00000510472 ADRA2BP18089 450 aa15.53■□□□□ 0.08
HMGXB3-203ENST00000510472 RIPK4P57078 832 aa15.53■□□□□ 0.08
HMGXB3-203ENST00000510472 CCDC146Q8IYE0 955 aa15.53■□□□□ 0.08
HMGXB3-203ENST00000510472 TTC5Q8N0Z6 440 aa15.53■□□□□ 0.08
HMGXB3-203ENST00000510472 ARHGEF1Q92888 912 aaKnown RBP15.53■□□□□ 0.08
HMGXB3-203ENST00000510472 HEG1Q9ULI3 1381 aa15.52■□□□□ 0.08
HMGXB3-203ENST00000510472 PHF14O94880 888 aa15.52■□□□□ 0.08
HMGXB3-203ENST00000510472 TRAPPC3LQ5T215 181 aa15.52■□□□□ 0.08
HMGXB3-203ENST00000510472 PNISRQ8TF01 805 aaKnown RBP15.52■□□□□ 0.08
HMGXB3-203ENST00000510472 THUMPD2Q9BTF0 503 aaKnown RBP15.52■□□□□ 0.08
HMGXB3-203ENST00000510472 MSH5O43196 834 aa15.51■□□□□ 0.07
HMGXB3-203ENST00000510472 FMNL2Q96PY5 1086 aa15.51■□□□□ 0.07
HMGXB3-203ENST00000510472 ARXQ96QS3 562 aa15.51■□□□□ 0.07
HMGXB3-203ENST00000510472 TEX13AQ9BXU3 409 aaPredicted RBP15.51■□□□□ 0.07
HMGXB3-203ENST00000510472 CCDC87Q9NVE4 849 aa15.51■□□□□ 0.07
HMGXB3-203ENST00000510472 TRIM35Q9UPQ4 493 aa15.51■□□□□ 0.07
HMGXB3-203ENST00000510472 CICQ96RK0 1608 aaPredicted RBP15.5■□□□□ 0.07
HMGXB3-203ENST00000510472 MIS18AQ9NYP9 233 aa15.5■□□□□ 0.07
HMGXB3-203ENST00000510472 PPP1R1BQ9UD71 204 aaPredicted RBP15.5■□□□□ 0.07
HMGXB3-203ENST00000510472 TUBGCP6Q96RT7 1819 aa15.5■□□□□ 0.07
HMGXB3-203ENST00000510472 STARD3NLO95772 234 aa15.49■□□□□ 0.07
HMGXB3-203ENST00000510472 MSL1Q68DK7 614 aa15.49■□□□□ 0.07
HMGXB3-203ENST00000510472 RRP7AQ9Y3A4 280 aaKnown RBP15.49■□□□□ 0.07
HMGXB3-203ENST00000510472 SIPA1L3O60292 1781 aaPredicted RBP15.49■□□□□ 0.07
HMGXB3-203ENST00000510472 UBR3Q6ZT12 1888 aa15.48■□□□□ 0.07
HMGXB3-203ENST00000510472 SOS1Q07889 1333 aaPredicted RBP15.48■□□□□ 0.07
HMGXB3-203ENST00000510472 POLD1P28340 1107 aa15.48■□□□□ 0.07
HMGXB3-203ENST00000510472 SYT17Q9BSW7 474 aa15.48■□□□□ 0.07
HMGXB3-203ENST00000510472 FHDC1Q9C0D6 1143 aaPredicted RBP15.48■□□□□ 0.07
HMGXB3-203ENST00000510472 ZBTB1Q9Y2K1 713 aa15.48■□□□□ 0.07
HMGXB3-203ENST00000510472 USP16Q9Y5T5 823 aa15.48■□□□□ 0.07
HMGXB3-203ENST00000510472 COL5A3P25940 1745 aaPredicted RBP15.48■□□□□ 0.07
HMGXB3-203ENST00000510472 COL24A1Q17RW2 1714 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms