RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 CHRM1P11229 460 aaPredicted RBP13.28□□□□□ -0.28
NEK1-205ENST00000510108 EVA1CP58658 441 aa13.28□□□□□ -0.28
NEK1-205ENST00000510108 PLEKHO1Q53GL0 409 aaPredicted RBP13.28□□□□□ -0.28
NEK1-205ENST00000510108 BTG4Q9NY30 223 aa13.28□□□□□ -0.28
NEK1-205ENST00000510108 FANCIQ9NVI1 1328 aa13.28□□□□□ -0.28
NEK1-205ENST00000510108 SCN11AQ9UI33 1791 aa13.28□□□□□ -0.28
NEK1-205ENST00000510108 GNAT3A8MTJ3 354 aa13.27□□□□□ -0.29
NEK1-205ENST00000510108 TATP17735 454 aaPredicted RBP13.27□□□□□ -0.29
NEK1-205ENST00000510108 AKAP4Q5JQC9 854 aa13.27□□□□□ -0.29
NEK1-205ENST00000510108 RAPGEF4Q8WZA2 1011 aa13.27□□□□□ -0.29
NEK1-205ENST00000510108 MRC1P22897 1456 aa13.27□□□□□ -0.29
NEK1-205ENST00000510108 KDM3BQ7LBC6 1761 aa13.26□□□□□ -0.29
NEK1-205ENST00000510108 CT47B1P0C2W7 299 aaPredicted RBP13.26□□□□□ -0.29
NEK1-205ENST00000510108 GNAI1P63096 354 aa13.26□□□□□ -0.29
NEK1-205ENST00000510108 ZNF772Q68DY9 489 aaPredicted RBP13.26□□□□□ -0.29
NEK1-205ENST00000510108 LARP1Q6PKG0 1096 aaKnown RBP13.26□□□□□ -0.29
NEK1-205ENST00000510108 TOM1L2Q6ZVM7 507 aa13.26□□□□□ -0.29
NEK1-205ENST00000510108 KIF12Q96FN5 646 aa13.26□□□□□ -0.29
NEK1-205ENST00000510108 CFAP44Q96MT7 982 aa13.26□□□□□ -0.29
NEK1-205ENST00000510108 CCDC9Q9Y3X0 531 aaKnown RBP13.25□□□□□ -0.29
NEK1-205ENST00000510108 ZNF530Q6P9A1 599 aaPredicted RBP13.24□□□□□ -0.29
NEK1-205ENST00000510108 RTF1Q92541 710 aaKnown RBP13.24□□□□□ -0.29
NEK1-205ENST00000510108 THUMPD2Q9BTF0 503 aaKnown RBP13.24□□□□□ -0.29
NEK1-205ENST00000510108 BABAM1Q9NWV8 329 aa13.24□□□□□ -0.29
NEK1-205ENST00000510108 USP21Q9UK80 565 aa13.24□□□□□ -0.29
NEK1-205ENST00000510108 RCAN3Q9UKA8 241 aa13.24□□□□□ -0.29
NEK1-205ENST00000510108 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
NEK1-205ENST00000510108 MAP3K13O43283 966 aa13.23□□□□□ -0.29
NEK1-205ENST00000510108 IL2RBP14784 551 aa13.23□□□□□ -0.29
NEK1-205ENST00000510108 DCTN1Q14203 1278 aa13.23□□□□□ -0.29
NEK1-205ENST00000510108 MCM10Q7L590 875 aa13.23□□□□□ -0.29
NEK1-205ENST00000510108 STRN4Q9NRL3 753 aa13.23□□□□□ -0.29
NEK1-205ENST00000510108 SPG7Q9UQ90 795 aa13.23□□□□□ -0.29
NEK1-205ENST00000510108 KDM6AO15550 1401 aaPredicted RBP13.22□□□□□ -0.29
NEK1-205ENST00000510108 AFF2P51816 1311 aa13.22□□□□□ -0.29
NEK1-205ENST00000510108 CHL1O00533 1208 aa13.22□□□□□ -0.29
NEK1-205ENST00000510108 FNBP4Q8N3X1 1017 aaPredicted RBP13.22□□□□□ -0.29
NEK1-205ENST00000510108 IL17REQ8NFR9 667 aa13.22□□□□□ -0.29
NEK1-205ENST00000510108 PCDH11XQ9BZA7 1347 aa13.21□□□□□ -0.29
NEK1-205ENST00000510108 PCDH11YQ9BZA8 1340 aa13.21□□□□□ -0.29
NEK1-205ENST00000510108 PHKG2P15735 406 aa13.21□□□□□ -0.29
NEK1-205ENST00000510108 C1orf141Q5JVX7 400 aa13.21□□□□□ -0.29
NEK1-205ENST00000510108 TSR2Q969E8 191 aaKnown RBP13.21□□□□□ -0.29
NEK1-205ENST00000510108 MBIPQ9NS73 344 aa13.21□□□□□ -0.29
NEK1-205ENST00000510108 THRAP3Q9Y2W1 955 aaKnown RBP13.21□□□□□ -0.29
NEK1-205ENST00000510108 SUPT16HQ9Y5B9 1047 aaKnown RBP13.21□□□□□ -0.29
NEK1-205ENST00000510108 TNS2Q63HR2 1409 aa13.21□□□□□ -0.3
NEK1-205ENST00000510108 SPATA31A1Q5TZJ5 1347 aa13.2□□□□□ -0.3
NEK1-205ENST00000510108 UNC5CLQ8IV45 518 aa13.2□□□□□ -0.3
NEK1-205ENST00000510108 IFNL2Q8IZJ0 200 aa13.2□□□□□ -0.3
NEK1-205ENST00000510108 TRPC5Q9UL62 973 aaPredicted RBP13.2□□□□□ -0.3
NEK1-205ENST00000510108 PAPPAQ13219 1627 aa13.2□□□□□ -0.3
NEK1-205ENST00000510108 SPATA31A5Q5VU36 1347 aa13.19□□□□□ -0.3
NEK1-205ENST00000510108 SPATA31A7Q8IWB4 1347 aa13.19□□□□□ -0.3
NEK1-205ENST00000510108 TOGARAM1Q9Y4F4 1720 aa13.19□□□□□ -0.3
NEK1-205ENST00000510108 CYP27B1O15528 508 aa13.19□□□□□ -0.3
NEK1-205ENST00000510108 RNMTO43148 476 aaKnown RBP13.19□□□□□ -0.3
NEK1-205ENST00000510108 HSP90AB1P08238 724 aaKnown RBP13.19□□□□□ -0.3
NEK1-205ENST00000510108 EXOSC9Q06265 439 aaKnown RBP13.19□□□□□ -0.3
NEK1-205ENST00000510108 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
NEK1-205ENST00000510108 ZNF428Q96B54 188 aa13.19□□□□□ -0.3
NEK1-205ENST00000510108 CDCA7Q9BWT1 371 aaPredicted RBP13.19□□□□□ -0.3
NEK1-205ENST00000510108 PCDHB13Q9Y5F0 798 aa13.19□□□□□ -0.3
NEK1-205ENST00000510108 THSD7AQ9UPZ6 1657 aa13.19□□□□□ -0.3
NEK1-205ENST00000510108 A0A0G2JS52 829 aa13.18□□□□□ -0.3
NEK1-205ENST00000510108 RRP1P56182 461 aaKnown RBP13.18□□□□□ -0.3
NEK1-205ENST00000510108 MYT1Q01538 1121 aa13.18□□□□□ -0.3
NEK1-205ENST00000510108 NKX1-1Q15270 411 aaPredicted RBP13.18□□□□□ -0.3
NEK1-205ENST00000510108 BARGINQ6ZT62 677 aa13.18□□□□□ -0.3
NEK1-205ENST00000510108 ZCRB1Q8TBF4 217 aaKnown RBP13.18□□□□□ -0.3
NEK1-205ENST00000510108 SGIP1Q9BQI5 828 aa13.18□□□□□ -0.3
NEK1-205ENST00000510108 SOS1Q07889 1333 aaPredicted RBP13.18□□□□□ -0.3
NEK1-205ENST00000510108 RGL2O15211 777 aa13.17□□□□□ -0.3
NEK1-205ENST00000510108 CLCN6P51797 869 aa13.17□□□□□ -0.3
NEK1-205ENST00000510108 TAF7Q15545 349 aaPredicted RBP13.17□□□□□ -0.3
NEK1-205ENST00000510108 VPS72Q15906 364 aa13.17□□□□□ -0.3
NEK1-205ENST00000510108 RNF25Q96BH1 459 aaPredicted RBP13.17□□□□□ -0.3
NEK1-205ENST00000510108 DCAF5Q96JK2 942 aa13.17□□□□□ -0.3
NEK1-205ENST00000510108 QTRT2Q9H974 415 aaKnown RBP13.17□□□□□ -0.3
NEK1-205ENST00000510108 LGR6Q9HBX8 967 aa13.17□□□□□ -0.3
NEK1-205ENST00000510108 RARSP54136 660 aaKnown RBP13.16□□□□□ -0.3
NEK1-205ENST00000510108 MS4A3Q96HJ5 214 aa13.16□□□□□ -0.3
NEK1-205ENST00000510108 GTF3C3Q9Y5Q9 886 aa13.16□□□□□ -0.3
NEK1-205ENST00000510108 GLI3P10071 1580 aa13.16□□□□□ -0.3
NEK1-205ENST00000510108 ATRNO75882 1429 aa13.16□□□□□ -0.3
NEK1-205ENST00000510108 BRPF1P55201 1214 aaPredicted RBP13.15□□□□□ -0.3
NEK1-205ENST00000510108 ALDH1L2Q3SY69 923 aa13.15□□□□□ -0.3
NEK1-205ENST00000510108 ERICH6BQ5W0A0 696 aa13.15□□□□□ -0.3
NEK1-205ENST00000510108 MPRIPQ6WCQ1 1025 aa13.15□□□□□ -0.3
NEK1-205ENST00000510108 TSPYL4Q9UJ04 414 aa13.15□□□□□ -0.3
NEK1-205ENST00000510108 LAS1LQ9Y4W2 734 aaKnown RBP13.15□□□□□ -0.3
NEK1-205ENST00000510108 UBR2Q8IWV8 1755 aa13.15□□□□□ -0.3
NEK1-205ENST00000510108 VAMP4O75379 141 aa13.14□□□□□ -0.31
NEK1-205ENST00000510108 GABBR2O75899 941 aa13.14□□□□□ -0.31
NEK1-205ENST00000510108 NEFLP07196 543 aa13.14□□□□□ -0.31
NEK1-205ENST00000510108 RXRBP28702 533 aa13.14□□□□□ -0.31
NEK1-205ENST00000510108 IFNL1Q8IU54 200 aa13.14□□□□□ -0.31
NEK1-205ENST00000510108 USP35Q9P2H5 1018 aa13.14□□□□□ -0.31
NEK1-205ENST00000510108 RBM6P78332 1123 aaKnown RBP13.13□□□□□ -0.31
NEK1-205ENST00000510108 TEFQ10587 303 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms