RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 MBIPQ9NS73 344 aa21.61■■□□□ 1.05
SCAMP1-203ENST00000510030 SIPA1L3O60292 1781 aaPredicted RBP21.61■■□□□ 1.05
SCAMP1-203ENST00000510030 A0A0G2JS52 829 aa21.6■■□□□ 1.05
SCAMP1-203ENST00000510030 MYT1Q01538 1121 aa21.6■■□□□ 1.05
SCAMP1-203ENST00000510030 NKX1-1Q15270 411 aaPredicted RBP21.6■■□□□ 1.05
SCAMP1-203ENST00000510030 FAM98CQ17RN3 349 aaKnown RBP21.6■■□□□ 1.05
SCAMP1-203ENST00000510030 FAM182BQ5T319 152 aa21.6■■□□□ 1.05
SCAMP1-203ENST00000510030 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.6■■□□□ 1.05
SCAMP1-203ENST00000510030 TSPYL4Q9UJ04 414 aa21.6■■□□□ 1.05
SCAMP1-203ENST00000510030 CYP27B1O15528 508 aa21.59■■□□□ 1.05
SCAMP1-203ENST00000510030 MPRIPQ6WCQ1 1025 aa21.59■■□□□ 1.05
SCAMP1-203ENST00000510030 TSR2Q969E8 191 aaKnown RBP21.59■■□□□ 1.05
SCAMP1-203ENST00000510030 KDM3BQ7LBC6 1761 aa21.58■■□□□ 1.04
SCAMP1-203ENST00000510030 KDM6AO15550 1401 aaPredicted RBP21.57■■□□□ 1.04
SCAMP1-203ENST00000510030 ERVV-2B6SEH9 535 aa21.57■■□□□ 1.04
SCAMP1-203ENST00000510030 DDB1Q16531 1140 aa21.57■■□□□ 1.04
SCAMP1-203ENST00000510030 EXOSC9Q06265 439 aaKnown RBP21.56■■□□□ 1.04
SCAMP1-203ENST00000510030 KRT27Q7Z3Y8 459 aa21.55■■□□□ 1.04
SCAMP1-203ENST00000510030 SLC52A2Q9HAB3 445 aa21.55■■□□□ 1.04
SCAMP1-203ENST00000510030 SUPT16HQ9Y5B9 1047 aaKnown RBP21.55■■□□□ 1.04
SCAMP1-203ENST00000510030 RNF123Q5XPI4 1314 aa21.55■■□□□ 1.04
SCAMP1-203ENST00000510030 BTBD11A6QL63 1104 aa21.54■■□□□ 1.04
SCAMP1-203ENST00000510030 ALDH1L2Q3SY69 923 aa21.54■■□□□ 1.04
SCAMP1-203ENST00000510030 DDX54Q8TDD1 881 aaKnown RBP21.54■■□□□ 1.04
SCAMP1-203ENST00000510030 LGR6Q9HBX8 967 aa21.54■■□□□ 1.04
SCAMP1-203ENST00000510030 THSD7AQ9UPZ6 1657 aa21.53■■□□□ 1.04
SCAMP1-203ENST00000510030 ONECUT3O60422 494 aaPredicted RBP21.53■■□□□ 1.04
SCAMP1-203ENST00000510030 HOXB7P09629 217 aa21.52■■□□□ 1.04
SCAMP1-203ENST00000510030 CABP4P57796 275 aa21.52■■□□□ 1.04
SCAMP1-203ENST00000510030 TWISTNBQ3B726 338 aaPredicted RBP21.52■■□□□ 1.04
SCAMP1-203ENST00000510030 CCDC125Q86Z20 511 aa21.51■■□□□ 1.03
SCAMP1-203ENST00000510030 RRP1P56182 461 aaKnown RBP21.5■■□□□ 1.03
SCAMP1-203ENST00000510030 KIF16BQ96L93 1317 aa21.5■■□□□ 1.03
SCAMP1-203ENST00000510030 RARSP54136 660 aaKnown RBP21.49■■□□□ 1.03
SCAMP1-203ENST00000510030 TTC5Q8N0Z6 440 aa21.49■■□□□ 1.03
SCAMP1-203ENST00000510030 MS4A1P11836 297 aa21.48■■□□□ 1.03
SCAMP1-203ENST00000510030 ERICH6BQ5W0A0 696 aa21.48■■□□□ 1.03
SCAMP1-203ENST00000510030 TMOD3Q9NYL9 352 aa21.47■■□□□ 1.03
SCAMP1-203ENST00000510030 TOGARAM1Q9Y4F4 1720 aa21.46■■□□□ 1.03
SCAMP1-203ENST00000510030 VAMP4O75379 141 aa21.46■■□□□ 1.03
SCAMP1-203ENST00000510030 CANXP27824 592 aaKnown RBP21.46■■□□□ 1.03
SCAMP1-203ENST00000510030 BRPF1P55201 1214 aaPredicted RBP21.46■■□□□ 1.03
SCAMP1-203ENST00000510030 NFATC2IPQ8NCF5 419 aa21.46■■□□□ 1.03
SCAMP1-203ENST00000510030 SMC4Q9NTJ3 1288 aa21.46■■□□□ 1.03
SCAMP1-203ENST00000510030 PAPPAQ13219 1627 aa21.46■■□□□ 1.03
SCAMP1-203ENST00000510030 CACNA1FO60840 1977 aa21.46■■□□□ 1.03
SCAMP1-203ENST00000510030 PSDA5PKW4 1024 aaPredicted RBP21.45■■□□□ 1.02
SCAMP1-203ENST00000510030 IPO8O15397 1037 aaKnown RBP21.45■■□□□ 1.02
SCAMP1-203ENST00000510030 SF3B2Q13435 895 aaKnown RBP21.45■■□□□ 1.02
SCAMP1-203ENST00000510030 ZNF790Q6PG37 636 aa21.45■■□□□ 1.02
SCAMP1-203ENST00000510030 DOT1LQ8TEK3 1739 aa21.44■■□□□ 1.02
SCAMP1-203ENST00000510030 EIF4A1P60842 406 aaKnown RBP21.44■■□□□ 1.02
SCAMP1-203ENST00000510030 C8orf58Q8NAV2 365 aa21.44■■□□□ 1.02
SCAMP1-203ENST00000510030 MIS18AQ9NYP9 233 aa21.44■■□□□ 1.02
SCAMP1-203ENST00000510030 ITGB4P16144 1822 aa21.43■■□□□ 1.02
SCAMP1-203ENST00000510030 CCDC30Q5VVM6 783 aa21.43■■□□□ 1.02
SCAMP1-203ENST00000510030 STK31Q9BXU1 1019 aa21.43■■□□□ 1.02
SCAMP1-203ENST00000510030 BCL9O00512 1426 aa21.43■■□□□ 1.02
SCAMP1-203ENST00000510030 UBR2Q8IWV8 1755 aa21.43■■□□□ 1.02
SCAMP1-203ENST00000510030 EN1Q05925 392 aaPredicted RBP21.42■■□□□ 1.02
SCAMP1-203ENST00000510030 FMNL2Q96PY5 1086 aa21.42■■□□□ 1.02
SCAMP1-203ENST00000510030 HEG1Q9ULI3 1381 aa21.41■■□□□ 1.02
SCAMP1-203ENST00000510030 TSPYL6Q8N831 410 aa21.41■■□□□ 1.02
SCAMP1-203ENST00000510030 SSH1Q8WYL5 1049 aa21.41■■□□□ 1.02
SCAMP1-203ENST00000510030 PDE3AQ14432 1141 aa21.4■■□□□ 1.02
SCAMP1-203ENST00000510030 TNS1Q9HBL0 1735 aaKnown RBP21.4■■□□□ 1.02
SCAMP1-203ENST00000510030 LAMB4A4D0S4 1761 aa21.39■■□□□ 1.01
SCAMP1-203ENST00000510030 ELL2O00472 640 aaPredicted RBP21.39■■□□□ 1.01
SCAMP1-203ENST00000510030 ZKSCAN2Q63HK3 967 aa21.39■■□□□ 1.01
SCAMP1-203ENST00000510030 MARCH10Q8NA82 808 aaPredicted RBP21.39■■□□□ 1.01
SCAMP1-203ENST00000510030 ARHGAP45Q92619 1136 aa21.39■■□□□ 1.01
SCAMP1-203ENST00000510030 BCAR3O75815 825 aa21.38■■□□□ 1.01
SCAMP1-203ENST00000510030 GTF3C3Q9Y5Q9 886 aa21.38■■□□□ 1.01
SCAMP1-203ENST00000510030 SNRPA1P09661 255 aaKnown RBP21.37■■□□□ 1.01
SCAMP1-203ENST00000510030 HDGFL1Q5TGJ6 251 aa21.37■■□□□ 1.01
SCAMP1-203ENST00000510030 PTPRCP08575 1304 aa21.36■■□□□ 1.01
SCAMP1-203ENST00000510030 GIGYF1O75420 1035 aaPredicted RBP21.36■■□□□ 1.01
SCAMP1-203ENST00000510030 BAG6P46379 1132 aa21.36■■□□□ 1.01
SCAMP1-203ENST00000510030 FRAT1Q92837 279 aaPredicted RBP21.36■■□□□ 1.01
SCAMP1-203ENST00000510030 TRIM37O94972 964 aa21.35■■□□□ 1.01
SCAMP1-203ENST00000510030 FKBP8Q14318 412 aa21.35■■□□□ 1.01
SCAMP1-203ENST00000510030 VSIG10Q8N0Z9 540 aa21.35■■□□□ 1.01
SCAMP1-203ENST00000510030 MRPL50Q8N5N7 158 aaKnown RBP21.35■■□□□ 1.01
SCAMP1-203ENST00000510030 TEX13AQ9BXU3 409 aaPredicted RBP21.35■■□□□ 1.01
SCAMP1-203ENST00000510030 NHSQ6T4R5 1651 aa21.34■■□□□ 1.01
SCAMP1-203ENST00000510030 AAMPQ13685 434 aa21.34■■□□□ 1.01
SCAMP1-203ENST00000510030 EZH2Q15910 746 aaKnown RBP21.34■■□□□ 1.01
SCAMP1-203ENST00000510030 KRT24Q2M2I5 525 aa21.34■■□□□ 1.01
SCAMP1-203ENST00000510030 FTSJ3Q8IY81 847 aaKnown RBP21.34■■□□□ 1.01
SCAMP1-203ENST00000510030 SMARCC1Q92922 1105 aaPredicted RBP21.34■■□□□ 1.01
SCAMP1-203ENST00000510030 SYTL4Q96C24 671 aaPredicted RBP21.34■■□□□ 1.01
SCAMP1-203ENST00000510030 BCL2L13Q9BXK5 485 aa21.34■■□□□ 1.01
SCAMP1-203ENST00000510030 API5Q9BZZ5 524 aaKnown RBP21.34■■□□□ 1.01
SCAMP1-203ENST00000510030 KCPQ6ZWJ8 1503 aa21.34■■□□□ 1.01
SCAMP1-203ENST00000510030 ERBB4Q15303 1308 aa21.33■■□□□ 1.01
SCAMP1-203ENST00000510030 SLC39A6Q13433 755 aa21.33■■□□□ 1.01
SCAMP1-203ENST00000510030 ATF7IPQ6VMQ6 1270 aa21.33■■□□□ 1.01
SCAMP1-203ENST00000510030 PIGBQ92521 554 aa21.33■■□□□ 1.01
SCAMP1-203ENST00000510030 ZNF496Q96IT1 587 aaPredicted RBP21.33■■□□□ 1.01
SCAMP1-203ENST00000510030 DBF4Q9UBU7 674 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms