RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 KDM6AO15550 1401 aaPredicted RBP31.82■■■□□ 2.68
ATP2C1-217ENST00000509662 TAF1LQ8IZX4 1826 aa31.8■■■□□ 2.68
ATP2C1-217ENST00000509662 DCAF8L1A6NGE4 600 aa31.8■■■□□ 2.68
ATP2C1-217ENST00000509662 POLD1P28340 1107 aa31.8■■■□□ 2.68
ATP2C1-217ENST00000509662 NUDCQ9Y266 331 aa31.8■■■□□ 2.68
ATP2C1-217ENST00000509662 COL23A1Q86Y22 540 aaPredicted RBP31.79■■■□□ 2.68
ATP2C1-217ENST00000509662 NFATC2IPQ8NCF5 419 aa31.79■■■□□ 2.68
ATP2C1-217ENST00000509662 ARXQ96QS3 562 aa31.79■■■□□ 2.68
ATP2C1-217ENST00000509662 TUBGCP6Q96RT7 1819 aa31.78■■■□□ 2.68
ATP2C1-217ENST00000509662 RBM42Q9BTD8 480 aaKnown RBP31.78■■■□□ 2.68
ATP2C1-217ENST00000509662 MTHFSDQ2M296 383 aaKnown RBP31.76■■■□□ 2.67
ATP2C1-217ENST00000509662 C4BP0C0L5 1744 aa31.75■■■□□ 2.67
ATP2C1-217ENST00000509662 ITPK1Q13572 414 aa31.74■■■□□ 2.67
ATP2C1-217ENST00000509662 LINC00116Q8NCU8 138 aa31.74■■■□□ 2.67
ATP2C1-217ENST00000509662 FHDC1Q9C0D6 1143 aaPredicted RBP31.73■■■□□ 2.67
ATP2C1-217ENST00000509662 PRKRIP1Q9H875 184 aaPredicted RBP31.73■■■□□ 2.67
ATP2C1-217ENST00000509662 MYBBP1AQ9BQG0 1328 aaKnown RBP31.73■■■□□ 2.67
ATP2C1-217ENST00000509662 RNMTO43148 476 aaKnown RBP31.72■■■□□ 2.67
ATP2C1-217ENST00000509662 LGR6Q9HBX8 967 aa31.72■■■□□ 2.67
ATP2C1-217ENST00000509662 GAS2L2Q8NHY3 880 aa31.71■■■□□ 2.67
ATP2C1-217ENST00000509662 SYT17Q9BSW7 474 aa31.71■■■□□ 2.67
ATP2C1-217ENST00000509662 SLC52A2Q9HAB3 445 aa31.71■■■□□ 2.67
ATP2C1-217ENST00000509662 SCN11AQ9UI33 1791 aa31.71■■■□□ 2.67
ATP2C1-217ENST00000509662 SSFA2P28290 1259 aa31.7■■■□□ 2.67
ATP2C1-217ENST00000509662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.68■■■□□ 2.66
ATP2C1-217ENST00000509662 GNPATO15228 680 aa31.68■■■□□ 2.66
ATP2C1-217ENST00000509662 PTCD1O75127 700 aaKnown RBP31.68■■■□□ 2.66
ATP2C1-217ENST00000509662 PHF14O94880 888 aa31.68■■■□□ 2.66
ATP2C1-217ENST00000509662 U2AF1L5P0DN76 240 aaPredicted RBP31.68■■■□□ 2.66
ATP2C1-217ENST00000509662 U2AF1Q01081 240 aaKnown RBP eCLIP31.68■■■□□ 2.66
ATP2C1-217ENST00000509662 SLC4A9Q96Q91 983 aa31.67■■■□□ 2.66
ATP2C1-217ENST00000509662 ZNF831Q5JPB2 1677 aa31.66■■■□□ 2.66
ATP2C1-217ENST00000509662 GNAT3A8MTJ3 354 aa31.65■■■□□ 2.66
ATP2C1-217ENST00000509662 PRKAR2BP31323 418 aa31.65■■■□□ 2.66
ATP2C1-217ENST00000509662 RC3H1Q5TC82 1133 aaKnown RBP31.65■■■□□ 2.66
ATP2C1-217ENST00000509662 COL24A1Q17RW2 1714 aa31.64■■■□□ 2.66
ATP2C1-217ENST00000509662 MSL1Q68DK7 614 aa31.64■■■□□ 2.66
ATP2C1-217ENST00000509662 RSPH6AQ9H0K4 717 aa31.64■■■□□ 2.66
ATP2C1-217ENST00000509662 RTCBQ9Y3I0 505 aaKnown RBP31.64■■■□□ 2.66
ATP2C1-217ENST00000509662 UBR3Q6ZT12 1888 aa31.63■■■□□ 2.65
ATP2C1-217ENST00000509662 FCHSD2O94868 740 aa31.63■■■□□ 2.65
ATP2C1-217ENST00000509662 MAP3K5Q99683 1374 aa31.63■■■□□ 2.65
ATP2C1-217ENST00000509662 AMIGO3Q86WK7 504 aa31.62■■■□□ 2.65
ATP2C1-217ENST00000509662 KLHL34Q8N239 644 aa31.62■■■□□ 2.65
ATP2C1-217ENST00000509662 CNTNAP4Q9C0A0 1308 aa31.6■■■□□ 2.65
ATP2C1-217ENST00000509662 TRAPPC3LQ5T215 181 aa31.6■■■□□ 2.65
ATP2C1-217ENST00000509662 SMIM5Q71RC9 77 aa31.6■■■□□ 2.65
ATP2C1-217ENST00000509662 PHACTR3Q96KR7 559 aa31.6■■■□□ 2.65
ATP2C1-217ENST00000509662 TEFQ10587 303 aa31.59■■■□□ 2.65
ATP2C1-217ENST00000509662 MRC1P22897 1456 aa31.59■■■□□ 2.65
ATP2C1-217ENST00000509662 RPS6KA4O75676 772 aa31.57■■■□□ 2.64
ATP2C1-217ENST00000509662 ADRA2BP18089 450 aa31.57■■■□□ 2.64
ATP2C1-217ENST00000509662 VIRMAQ69YN4 1812 aaKnown RBP31.56■■■□□ 2.64
ATP2C1-217ENST00000509662 SLC39A6Q13433 755 aa31.56■■■□□ 2.64
ATP2C1-217ENST00000509662 IL17REQ8NFR9 667 aa31.56■■■□□ 2.64
ATP2C1-217ENST00000509662 ADAMTS7Q9UKP4 1686 aa31.56■■■□□ 2.64
ATP2C1-217ENST00000509662 NEFMP07197 916 aa31.55■■■□□ 2.64
ATP2C1-217ENST00000509662 TTC5Q8N0Z6 440 aa31.54■■■□□ 2.64
ATP2C1-217ENST00000509662 COL5A3P25940 1745 aaPredicted RBP31.53■■■□□ 2.64
ATP2C1-217ENST00000509662 CRKLP46109 303 aaKnown RBP31.53■■■□□ 2.64
ATP2C1-217ENST00000509662 RFC4P35249 363 aa31.52■■■□□ 2.64
ATP2C1-217ENST00000509662 RTF1Q92541 710 aaKnown RBP31.51■■■□□ 2.63
ATP2C1-217ENST00000509662 ARHGEF1Q92888 912 aaKnown RBP31.51■■■□□ 2.63
ATP2C1-217ENST00000509662 DNAJC10Q8IXB1 793 aa31.5■■■□□ 2.63
ATP2C1-217ENST00000509662 VSIG10Q8N0Z9 540 aa31.5■■■□□ 2.63
ATP2C1-217ENST00000509662 ANP32CO43423 234 aa31.49■■■□□ 2.63
ATP2C1-217ENST00000509662 NLGN1Q8N2Q7 840 aa31.49■■■□□ 2.63
ATP2C1-217ENST00000509662 PNNQ9H307 717 aaKnown RBP31.49■■■□□ 2.63
ATP2C1-217ENST00000509662 CD2APQ9Y5K6 639 aa31.48■■■□□ 2.63
ATP2C1-217ENST00000509662 CCDC87Q9NVE4 849 aa31.47■■■□□ 2.63
ATP2C1-217ENST00000509662 CICQ96RK0 1608 aaPredicted RBP31.46■■■□□ 2.63
ATP2C1-217ENST00000509662 CEMIPQ8WUJ3 1361 aa31.46■■■□□ 2.63
ATP2C1-217ENST00000509662 HTATSF1O43719 755 aaKnown RBP31.46■■■□□ 2.63
ATP2C1-217ENST00000509662 GPR162Q16538 588 aa31.46■■■□□ 2.63
ATP2C1-217ENST00000509662 ZNF790Q6PG37 636 aa31.46■■■□□ 2.63
ATP2C1-217ENST00000509662 MYH14Q7Z406 1995 aaKnown RBP31.46■■■□□ 2.63
ATP2C1-217ENST00000509662 CYP19A1P11511 503 aaPredicted RBP31.45■■■□□ 2.63
ATP2C1-217ENST00000509662 TJP1Q07157 1748 aa31.45■■■□□ 2.63
ATP2C1-217ENST00000509662 INTS5Q6P9B9 1019 aaKnown RBP31.45■■■□□ 2.63
ATP2C1-217ENST00000509662 NLGN2Q8NFZ4 835 aa31.44■■■□□ 2.62
ATP2C1-217ENST00000509662 PLEKHF1Q96S99 279 aa31.44■■■□□ 2.62
ATP2C1-217ENST00000509662 KCPQ6ZWJ8 1503 aa31.44■■■□□ 2.62
ATP2C1-217ENST00000509662 BTBD11A6QL63 1104 aa31.43■■■□□ 2.62
ATP2C1-217ENST00000509662 TEX13AQ9BXU3 409 aaPredicted RBP31.43■■■□□ 2.62
ATP2C1-217ENST00000509662 STARD3NLO95772 234 aa31.42■■■□□ 2.62
ATP2C1-217ENST00000509662 MMP10P09238 476 aa31.42■■■□□ 2.62
ATP2C1-217ENST00000509662 YY1P25490 414 aa31.42■■■□□ 2.62
ATP2C1-217ENST00000509662 PELP1Q8IZL8 1130 aaKnown RBP31.41■■■□□ 2.62
ATP2C1-217ENST00000509662 GYS1P13807 737 aa31.4■■■□□ 2.62
ATP2C1-217ENST00000509662 MCM10Q7L590 875 aa31.4■■■□□ 2.62
ATP2C1-217ENST00000509662 ZNF496Q96IT1 587 aaPredicted RBP31.4■■■□□ 2.62
ATP2C1-217ENST00000509662 FMNL2Q96PY5 1086 aa31.4■■■□□ 2.62
ATP2C1-217ENST00000509662 CCDC184Q52MB2 194 aa31.39■■■□□ 2.62
ATP2C1-217ENST00000509662 SIPA1L3O60292 1781 aaPredicted RBP31.38■■■□□ 2.61
ATP2C1-217ENST00000509662 UBR2Q8IWV8 1755 aa31.38■■■□□ 2.61
ATP2C1-217ENST00000509662 WDR43Q15061 677 aaKnown RBP eCLIP31.37■■■□□ 2.61
ATP2C1-217ENST00000509662 MAPK8IP3Q9UPT6 1336 aa31.37■■■□□ 2.61
ATP2C1-217ENST00000509662 HEG1Q9ULI3 1381 aa31.37■■■□□ 2.61
ATP2C1-217ENST00000509662 USP42Q9H9J4 1324 aaKnown RBP31.36■■■□□ 2.61
ATP2C1-217ENST00000509662 ZPR1O75312 459 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms