RNA–Protein interactions for RNA: ENST00000509632.5

SDHA-212, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-212ENST00000509632 ITPK1Q13572 414 aa29.45■■■□□ 2.31
SDHA-212ENST00000509632 C1orf141Q5JVX7 400 aa29.44■■■□□ 2.3
SDHA-212ENST00000509632 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.43■■■□□ 2.3
SDHA-212ENST00000509632 CABP4P57796 275 aa29.43■■■□□ 2.3
SDHA-212ENST00000509632 NLGN2Q8NFZ4 835 aa29.43■■■□□ 2.3
SDHA-212ENST00000509632 PELP1Q8IZL8 1130 aaKnown RBP29.42■■■□□ 2.3
SDHA-212ENST00000509632 RBM42Q9BTD8 480 aaKnown RBP29.42■■■□□ 2.3
SDHA-212ENST00000509632 TAF1LQ8IZX4 1826 aa29.42■■■□□ 2.3
SDHA-212ENST00000509632 CNGB1Q14028 1251 aaPredicted RBP29.41■■■□□ 2.3
SDHA-212ENST00000509632 COL24A1Q17RW2 1714 aa29.41■■■□□ 2.3
SDHA-212ENST00000509632 C4BP0C0L5 1744 aa29.4■■■□□ 2.3
SDHA-212ENST00000509632 SSFA2P28290 1259 aa29.39■■■□□ 2.3
SDHA-212ENST00000509632 GNPATO15228 680 aa29.38■■■□□ 2.29
SDHA-212ENST00000509632 SLC4A9Q96Q91 983 aa29.37■■■□□ 2.29
SDHA-212ENST00000509632 KDRP35968 1356 aa29.37■■■□□ 2.29
SDHA-212ENST00000509632 KDM6AO15550 1401 aaPredicted RBP29.37■■■□□ 2.29
SDHA-212ENST00000509632 NFATC2IPQ8NCF5 419 aa29.36■■■□□ 2.29
SDHA-212ENST00000509632 HMOX1P09601 288 aa29.35■■■□□ 2.29
SDHA-212ENST00000509632 UTRNP46939 3433 aa29.35■■■□□ 2.29
SDHA-212ENST00000509632 DIAPH1O60610 1272 aaKnown RBP29.34■■■□□ 2.29
SDHA-212ENST00000509632 CD2APQ9Y5K6 639 aa29.33■■■□□ 2.29
SDHA-212ENST00000509632 PTCD1O75127 700 aaKnown RBP29.32■■■□□ 2.28
SDHA-212ENST00000509632 AKAP4Q5JQC9 854 aa29.32■■■□□ 2.28
SDHA-212ENST00000509632 TRAPPC3LQ5T215 181 aa29.31■■■□□ 2.28
SDHA-212ENST00000509632 RTCBQ9Y3I0 505 aaKnown RBP29.31■■■□□ 2.28
SDHA-212ENST00000509632 ZNF784Q8NCA9 323 aaPredicted RBP29.3■■■□□ 2.28
SDHA-212ENST00000509632 UBR3Q6ZT12 1888 aa29.29■■■□□ 2.28
SDHA-212ENST00000509632 RC3H1Q5TC82 1133 aaKnown RBP29.29■■■□□ 2.28
SDHA-212ENST00000509632 LGR6Q9HBX8 967 aa29.28■■■□□ 2.28
SDHA-212ENST00000509632 NPC1L1Q9UHC9 1359 aa29.27■■■□□ 2.28
SDHA-212ENST00000509632 YBX3P16989 372 aaKnown RBP eCLIP29.27■■■□□ 2.28
SDHA-212ENST00000509632 GRIN3BO60391 1043 aa29.25■■■□□ 2.27
SDHA-212ENST00000509632 RPS6KA4O75676 772 aa29.25■■■□□ 2.27
SDHA-212ENST00000509632 MTHFSDQ2M296 383 aaKnown RBP29.25■■■□□ 2.27
SDHA-212ENST00000509632 ARHGEF1Q92888 912 aaKnown RBP29.25■■■□□ 2.27
SDHA-212ENST00000509632 CNTNAP4Q9C0A0 1308 aa29.23■■■□□ 2.27
SDHA-212ENST00000509632 U2SURPO15042 1029 aaKnown RBP29.23■■■□□ 2.27
SDHA-212ENST00000509632 RNMTO43148 476 aaKnown RBP29.23■■■□□ 2.27
SDHA-212ENST00000509632 SLC52A2Q9HAB3 445 aa29.23■■■□□ 2.27
SDHA-212ENST00000509632 CHD4Q14839 1912 aa29.22■■■□□ 2.27
SDHA-212ENST00000509632 MMP10P09238 476 aa29.21■■■□□ 2.27
SDHA-212ENST00000509632 ADRA2BP18089 450 aa29.21■■■□□ 2.27
SDHA-212ENST00000509632 RFC4P35249 363 aa29.21■■■□□ 2.27
SDHA-212ENST00000509632 NLGN1Q8N2Q7 840 aa29.21■■■□□ 2.27
SDHA-212ENST00000509632 CRKLP46109 303 aaKnown RBP29.19■■■□□ 2.26
SDHA-212ENST00000509632 SLC39A6Q13433 755 aa29.17■■■□□ 2.26
SDHA-212ENST00000509632 GOLGB1Q14789 3259 aaKnown RBP29.17■■■□□ 2.26
SDHA-212ENST00000509632 WWC3Q9ULE0 1092 aa29.16■■■□□ 2.26
SDHA-212ENST00000509632 ZNF831Q5JPB2 1677 aa29.15■■■□□ 2.26
SDHA-212ENST00000509632 GYS1P13807 737 aa29.15■■■□□ 2.26
SDHA-212ENST00000509632 DNAJC10Q8IXB1 793 aa29.14■■■□□ 2.26
SDHA-212ENST00000509632 INTS5Q6P9B9 1019 aaKnown RBP29.13■■■□□ 2.25
SDHA-212ENST00000509632 CFAP53Q96M91 514 aa29.13■■■□□ 2.25
SDHA-212ENST00000509632 SCN11AQ9UI33 1791 aa29.13■■■□□ 2.25
SDHA-212ENST00000509632 MYH14Q7Z406 1995 aaKnown RBP29.12■■■□□ 2.25
SDHA-212ENST00000509632 COL3A1P02461 1466 aaPredicted RBP29.11■■■□□ 2.25
SDHA-212ENST00000509632 GAS2L2Q8NHY3 880 aa29.1■■■□□ 2.25
SDHA-212ENST00000509632 SRP68Q9UHB9 627 aaKnown RBP29.1■■■□□ 2.25
SDHA-212ENST00000509632 COL5A3P25940 1745 aaPredicted RBP29.09■■■□□ 2.25
SDHA-212ENST00000509632 PARP3Q9Y6F1 533 aa29.09■■■□□ 2.25
SDHA-212ENST00000509632 GNAT3A8MTJ3 354 aa29.08■■■□□ 2.25
SDHA-212ENST00000509632 IL17REQ8NFR9 667 aa29.08■■■□□ 2.25
SDHA-212ENST00000509632 CCDC87Q9NVE4 849 aa29.08■■■□□ 2.25
SDHA-212ENST00000509632 CYP19A1P11511 503 aaPredicted RBP29.07■■■□□ 2.24
SDHA-212ENST00000509632 PPP2R1AP30153 589 aa29.07■■■□□ 2.24
SDHA-212ENST00000509632 NUDCQ9Y266 331 aa29.07■■■□□ 2.24
SDHA-212ENST00000509632 TGFB2P61812 414 aa29.06■■■□□ 2.24
SDHA-212ENST00000509632 A0A0G2JLW4 131 aa29.05■■■□□ 2.24
SDHA-212ENST00000509632 TEFQ10587 303 aa29.05■■■□□ 2.24
SDHA-212ENST00000509632 FKBP8Q14318 412 aa29.05■■■□□ 2.24
SDHA-212ENST00000509632 PHACTR3Q96KR7 559 aa29.05■■■□□ 2.24
SDHA-212ENST00000509632 USP42Q9H9J4 1324 aaKnown RBP29.04■■■□□ 2.24
SDHA-212ENST00000509632 PRKAR2BP31323 418 aa29.04■■■□□ 2.24
SDHA-212ENST00000509632 VSIG10Q8N0Z9 540 aa29.04■■■□□ 2.24
SDHA-212ENST00000509632 MRC1P22897 1456 aa29.04■■■□□ 2.24
SDHA-212ENST00000509632 ZPR1O75312 459 aa29.03■■■□□ 2.24
SDHA-212ENST00000509632 TTC5Q8N0Z6 440 aa29.03■■■□□ 2.24
SDHA-212ENST00000509632 U2AF1L5P0DN76 240 aaPredicted RBP29.02■■■□□ 2.24
SDHA-212ENST00000509632 U2AF1Q01081 240 aaKnown RBP eCLIP29.02■■■□□ 2.24
SDHA-212ENST00000509632 RSPH6AQ9H0K4 717 aa29.02■■■□□ 2.24
SDHA-212ENST00000509632 CICQ96RK0 1608 aaPredicted RBP29.01■■■□□ 2.23
SDHA-212ENST00000509632 TJP1Q07157 1748 aa29■■■□□ 2.23
SDHA-212ENST00000509632 SOS1Q07889 1333 aaPredicted RBP29■■■□□ 2.23
SDHA-212ENST00000509632 USPL1Q5W0Q7 1092 aa29■■■□□ 2.23
SDHA-212ENST00000509632 DPEP1P16444 411 aa28.99■■■□□ 2.23
SDHA-212ENST00000509632 ZBTB1Q9Y2K1 713 aa28.99■■■□□ 2.23
SDHA-212ENST00000509632 CANXP27824 592 aaKnown RBP28.98■■■□□ 2.23
SDHA-212ENST00000509632 C1QTNF8P60827 252 aa28.98■■■□□ 2.23
SDHA-212ENST00000509632 DDR1Q08345 913 aa28.98■■■□□ 2.23
SDHA-212ENST00000509632 ZNF790Q6PG37 636 aa28.98■■■□□ 2.23
SDHA-212ENST00000509632 BCS1LQ9Y276 419 aa28.98■■■□□ 2.23
SDHA-212ENST00000509632 KCPQ6ZWJ8 1503 aa28.98■■■□□ 2.23
SDHA-212ENST00000509632 PXDNLA1KZ92 1463 aa28.97■■■□□ 2.23
SDHA-212ENST00000509632 STARD3NLO95772 234 aa28.97■■■□□ 2.23
SDHA-212ENST00000509632 TM4SF1P30408 202 aa28.97■■■□□ 2.23
SDHA-212ENST00000509632 ZNF496Q96IT1 587 aaPredicted RBP28.97■■■□□ 2.23
SDHA-212ENST00000509632 ADAMTS7Q9UKP4 1686 aa28.96■■■□□ 2.23
SDHA-212ENST00000509632 C10orf71Q711Q0 1435 aa28.96■■■□□ 2.23
SDHA-212ENST00000509632 GIGYF1O75420 1035 aaPredicted RBP28.96■■■□□ 2.23
SDHA-212ENST00000509632 FCHSD2O94868 740 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms