RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 DALRD3Q5D0E6 543 aaKnown RBP19.52■□□□□ 0.72
HMGCR-208ENST00000509431 HDGFL2Q7Z4V5 671 aaPredicted RBP19.52■□□□□ 0.72
HMGCR-208ENST00000509431 LOC102724428A0A0B4J2F2 783 aa19.51■□□□□ 0.71
HMGCR-208ENST00000509431 TATP17735 454 aaPredicted RBP19.51■□□□□ 0.71
HMGCR-208ENST00000509431 SIK1P57059 783 aa19.51■□□□□ 0.71
HMGCR-208ENST00000509431 AIDAQ96BJ3 306 aa19.51■□□□□ 0.71
HMGCR-208ENST00000509431 CREBZFQ9NS37 354 aa19.51■□□□□ 0.71
HMGCR-208ENST00000509431 CD163L1Q9NR16 1453 aa19.51■□□□□ 0.71
HMGCR-208ENST00000509431 AMPHP49418 695 aa19.5■□□□□ 0.71
HMGCR-208ENST00000509431 GLTPD2A6NH11 291 aa19.49■□□□□ 0.71
HMGCR-208ENST00000509431 MLLT1Q03111 559 aaPredicted RBP19.49■□□□□ 0.71
HMGCR-208ENST00000509431 PARP3Q9Y6F1 533 aa19.49■□□□□ 0.71
HMGCR-208ENST00000509431 MAP3K19Q56UN5 1328 aa19.49■□□□□ 0.71
HMGCR-208ENST00000509431 ABHD8Q96I13 439 aa19.48■□□□□ 0.71
HMGCR-208ENST00000509431 TRAPPC3LQ5T215 181 aa19.47■□□□□ 0.71
HMGCR-208ENST00000509431 PIGBQ92521 554 aa19.47■□□□□ 0.71
HMGCR-208ENST00000509431 MKRN1Q9UHC7 482 aaKnown RBP19.47■□□□□ 0.71
HMGCR-208ENST00000509431 RTL1A6NKG5 1358 aa19.46■□□□□ 0.71
HMGCR-208ENST00000509431 KDM6AO15550 1401 aaPredicted RBP19.46■□□□□ 0.71
HMGCR-208ENST00000509431 NBPF6Q5VWK0 638 aa19.46■□□□□ 0.71
HMGCR-208ENST00000509431 NBPF4Q96M43 638 aa19.46■□□□□ 0.71
HMGCR-208ENST00000509431 RTCBQ9Y3I0 505 aaKnown RBP19.46■□□□□ 0.71
HMGCR-208ENST00000509431 SMG6Q86US8 1419 aaKnown RBP19.45■□□□□ 0.7
HMGCR-208ENST00000509431 ADRA2BP18089 450 aa19.45■□□□□ 0.7
HMGCR-208ENST00000509431 RGS19P49795 217 aa19.45■□□□□ 0.7
HMGCR-208ENST00000509431 TERF2IPQ9NYB0 399 aa19.44■□□□□ 0.7
HMGCR-208ENST00000509431 CNTNAP1P78357 1384 aa19.44■□□□□ 0.7
HMGCR-208ENST00000509431 CYP27B1O15528 508 aa19.43■□□□□ 0.7
HMGCR-208ENST00000509431 ATP6V1AP38606 617 aa19.43■□□□□ 0.7
HMGCR-208ENST00000509431 ITPK1Q13572 414 aa19.43■□□□□ 0.7
HMGCR-208ENST00000509431 LMNB1P20700 586 aa19.42■□□□□ 0.7
HMGCR-208ENST00000509431 USHBP1Q8N6Y0 703 aa19.42■□□□□ 0.7
HMGCR-208ENST00000509431 TMC1Q8TDI8 760 aa19.42■□□□□ 0.7
HMGCR-208ENST00000509431 COG3Q96JB2 828 aa19.42■□□□□ 0.7
HMGCR-208ENST00000509431 GYS1P13807 737 aa19.41■□□□□ 0.7
HMGCR-208ENST00000509431 LBX1P52954 281 aa19.4■□□□□ 0.7
HMGCR-208ENST00000509431 NKX1-1Q15270 411 aaPredicted RBP19.4■□□□□ 0.7
HMGCR-208ENST00000509431 RFC4P35249 363 aa19.39■□□□□ 0.69
HMGCR-208ENST00000509431 ARHGEF1Q92888 912 aaKnown RBP19.39■□□□□ 0.69
HMGCR-208ENST00000509431 A0A1W2PP64 1363 aa19.39■□□□□ 0.69
HMGCR-208ENST00000509431 RC3H1Q5TC82 1133 aaKnown RBP19.38■□□□□ 0.69
HMGCR-208ENST00000509431 CHADLQ6NUI6 762 aa19.38■□□□□ 0.69
HMGCR-208ENST00000509431 TIAM2Q8IVF5 1701 aa19.38■□□□□ 0.69
HMGCR-208ENST00000509431 SLC12A5Q9H2X9 1139 aa19.38■□□□□ 0.69
HMGCR-208ENST00000509431 WBP1LQ9NX94 342 aa19.38■□□□□ 0.69
HMGCR-208ENST00000509431 TMOD3Q9NYL9 352 aa19.38■□□□□ 0.69
HMGCR-208ENST00000509431 RASSF7Q02833 373 aa19.37■□□□□ 0.69
HMGCR-208ENST00000509431 DPY19L2Q6NUT2 758 aa19.37■□□□□ 0.69
HMGCR-208ENST00000509431 ASAP1Q9ULH1 1129 aa19.37■□□□□ 0.69
HMGCR-208ENST00000509431 CCDC88AQ3V6T2 1871 aa19.37■□□□□ 0.69
HMGCR-208ENST00000509431 VIRMAQ69YN4 1812 aaKnown RBP19.37■□□□□ 0.69
HMGCR-208ENST00000509431 ZNF831Q5JPB2 1677 aa19.36■□□□□ 0.69
HMGCR-208ENST00000509431 ROCK2O75116 1388 aaKnown RBP19.36■□□□□ 0.69
HMGCR-208ENST00000509431 POTECB2RU33 542 aa19.36■□□□□ 0.69
HMGCR-208ENST00000509431 CNTNAP4Q9C0A0 1308 aa19.34■□□□□ 0.69
HMGCR-208ENST00000509431 CCDC85CA6NKD9 419 aa19.34■□□□□ 0.69
HMGCR-208ENST00000509431 RPS6KA4O75676 772 aa19.34■□□□□ 0.69
HMGCR-208ENST00000509431 CHRNA5P30532 468 aa19.34■□□□□ 0.69
HMGCR-208ENST00000509431 HSPA8P11142 646 aaKnown RBP19.33■□□□□ 0.68
HMGCR-208ENST00000509431 KDRP35968 1356 aa19.32■□□□□ 0.68
HMGCR-208ENST00000509431 FBLN1P23142 703 aa19.32■□□□□ 0.68
HMGCR-208ENST00000509431 VEGFBP49765 207 aa19.32■□□□□ 0.68
HMGCR-208ENST00000509431 ATG3Q9NT62 314 aa19.32■□□□□ 0.68
HMGCR-208ENST00000509431 SPG7Q9UQ90 795 aa19.32■□□□□ 0.68
HMGCR-208ENST00000509431 INSRP06213 1382 aa19.32■□□□□ 0.68
HMGCR-208ENST00000509431 COL5A3P25940 1745 aaPredicted RBP19.31■□□□□ 0.68
HMGCR-208ENST00000509431 PUS7Q96PZ0 661 aaKnown RBP19.31■□□□□ 0.68
HMGCR-208ENST00000509431 RRS1Q15050 365 aaKnown RBP19.3■□□□□ 0.68
HMGCR-208ENST00000509431 PASKQ96RG2 1323 aa19.29■□□□□ 0.68
HMGCR-208ENST00000509431 MAP2K1Q02750 393 aaPredicted RBP19.29■□□□□ 0.68
HMGCR-208ENST00000509431 PDE4DIPQ5VU43 2346 aa19.28■□□□□ 0.68
HMGCR-208ENST00000509431 DICER1Q9UPY3 1922 aaKnown RBP19.28■□□□□ 0.68
HMGCR-208ENST00000509431 TMEM88BA6NKF7 163 aa19.28■□□□□ 0.68
HMGCR-208ENST00000509431 DDR1Q08345 913 aa19.28■□□□□ 0.68
HMGCR-208ENST00000509431 KIF24Q5T7B8 1368 aa19.28■□□□□ 0.68
HMGCR-208ENST00000509431 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.27■□□□□ 0.682e-8■□□□□ 10.4
HMGCR-208ENST00000509431 DLEC1Q9Y238 1755 aa19.27■□□□□ 0.67
HMGCR-208ENST00000509431 MYH14Q7Z406 1995 aaKnown RBP19.26■□□□□ 0.67
HMGCR-208ENST00000509431 FLT4P35916 1363 aa19.26■□□□□ 0.67
HMGCR-208ENST00000509431 USP42Q9H9J4 1324 aaKnown RBP19.25■□□□□ 0.67
HMGCR-208ENST00000509431 FKBP8Q14318 412 aa19.25■□□□□ 0.67
HMGCR-208ENST00000509431 HSP90AB2PQ58FF8 381 aa19.25■□□□□ 0.67
HMGCR-208ENST00000509431 LDHDQ86WU2 507 aa19.25■□□□□ 0.67
HMGCR-208ENST00000509431 TTLL6Q8N841 843 aa19.25■□□□□ 0.67
HMGCR-208ENST00000509431 L3MBTL2Q969R5 705 aa19.25■□□□□ 0.67
HMGCR-208ENST00000509431 NCAPD2Q15021 1401 aa19.25■□□□□ 0.67
HMGCR-208ENST00000509431 POLRMTO00411 1230 aaKnown RBP19.24■□□□□ 0.67
HMGCR-208ENST00000509431 IFNL2Q8IZJ0 200 aa19.24■□□□□ 0.67
HMGCR-208ENST00000509431 SLC4A9Q96Q91 983 aa19.24■□□□□ 0.67
HMGCR-208ENST00000509431 RBM42Q9BTD8 480 aaKnown RBP19.24■□□□□ 0.67
HMGCR-208ENST00000509431 NFKBIEO00221 500 aa19.23■□□□□ 0.67
HMGCR-208ENST00000509431 IQCA1LA6NCM1 817 aa19.22■□□□□ 0.67
HMGCR-208ENST00000509431 RASSF10A6NK89 507 aa19.22■□□□□ 0.67
HMGCR-208ENST00000509431 POTEIP0CG38 1075 aa19.22■□□□□ 0.67
HMGCR-208ENST00000509431 POTEJP0CG39 1038 aa19.22■□□□□ 0.67
HMGCR-208ENST00000509431 TM4SF1P30408 202 aa19.22■□□□□ 0.67
HMGCR-208ENST00000509431 ERFEQ4G0M1 354 aa19.22■□□□□ 0.67
HMGCR-208ENST00000509431 PHKG2P15735 406 aa19.21■□□□□ 0.67
HMGCR-208ENST00000509431 DEFB115Q30KQ5 88 aa19.21■□□□□ 0.67
HMGCR-208ENST00000509431 SRP68Q9UHB9 627 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms