RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 LOC102724428A0A0B4J2F2 783 aa14.93□□□□□ -0.02
RNF4-212ENST00000509258 SSFA2P28290 1259 aa14.93□□□□□ -0.02
RNF4-212ENST00000509258 SIK1P57059 783 aa14.93□□□□□ -0.02
RNF4-212ENST00000509258 KNSTRNQ9Y448 316 aa14.93□□□□□ -0.02
RNF4-212ENST00000509258 MYH14Q7Z406 1995 aaKnown RBP14.93□□□□□ -0.02
RNF4-212ENST00000509258 COL5A3P25940 1745 aaPredicted RBP14.92□□□□□ -0.02
RNF4-212ENST00000509258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.92□□□□□ -0.02
RNF4-212ENST00000509258 PHF14O94880 888 aa14.92□□□□□ -0.02
RNF4-212ENST00000509258 IL13P35225 146 aa14.91□□□□□ -0.02
RNF4-212ENST00000509258 IFNL2Q8IZJ0 200 aa14.91□□□□□ -0.02
RNF4-212ENST00000509258 ASAP1Q9ULH1 1129 aa14.91□□□□□ -0.02
RNF4-212ENST00000509258 COL3A1P02461 1466 aaPredicted RBP14.9□□□□□ -0.02
RNF4-212ENST00000509258 LINC00116Q8NCU8 138 aa14.9□□□□□ -0.02
RNF4-212ENST00000509258 KDRP35968 1356 aa14.89□□□□□ -0.03
RNF4-212ENST00000509258 GNPATO15228 680 aa14.89□□□□□ -0.03
RNF4-212ENST00000509258 ITPK1Q13572 414 aa14.89□□□□□ -0.03
RNF4-212ENST00000509258 CC2D1BQ5T0F9 858 aaKnown RBP14.89□□□□□ -0.03
RNF4-212ENST00000509258 ATP10DQ9P241 1426 aa14.89□□□□□ -0.03
RNF4-212ENST00000509258 ZNF831Q5JPB2 1677 aa14.88□□□□□ -0.03
RNF4-212ENST00000509258 ATP6V1AP38606 617 aa14.88□□□□□ -0.03
RNF4-212ENST00000509258 MTHFSP49914 203 aa14.88□□□□□ -0.03
RNF4-212ENST00000509258 SULT6B1Q6IMI4 303 aa14.88□□□□□ -0.03
RNF4-212ENST00000509258 SLC4A9Q96Q91 983 aa14.88□□□□□ -0.03
RNF4-212ENST00000509258 TJP1Q07157 1748 aa14.88□□□□□ -0.03
RNF4-212ENST00000509258 CNGB1Q14028 1251 aaPredicted RBP14.87□□□□□ -0.03
RNF4-212ENST00000509258 ATG3Q9NT62 314 aa14.87□□□□□ -0.03
RNF4-212ENST00000509258 ADCY9O60503 1353 aa14.86□□□□□ -0.03
RNF4-212ENST00000509258 HSP90AB1P08238 724 aaKnown RBP14.86□□□□□ -0.03
RNF4-212ENST00000509258 ZNF530Q6P9A1 599 aaPredicted RBP14.86□□□□□ -0.03
RNF4-212ENST00000509258 ADAMTS7Q9UKP4 1686 aa14.86□□□□□ -0.03
RNF4-212ENST00000509258 C4AP0C0L4 1744 aa14.86□□□□□ -0.03
RNF4-212ENST00000509258 DCAF5Q96JK2 942 aa14.85□□□□□ -0.03
RNF4-212ENST00000509258 ERVV-2B6SEH9 535 aa14.84□□□□□ -0.03
RNF4-212ENST00000509258 HMOX1P09601 288 aa14.84□□□□□ -0.03
RNF4-212ENST00000509258 GPBP1L1Q9HC44 474 aaPredicted RBP14.84□□□□□ -0.03
RNF4-212ENST00000509258 PLEKHO1Q53GL0 409 aaPredicted RBP14.83□□□□□ -0.04
RNF4-212ENST00000509258 RTCBQ9Y3I0 505 aaKnown RBP14.83□□□□□ -0.04
RNF4-212ENST00000509258 CICQ96RK0 1608 aaPredicted RBP14.83□□□□□ -0.04
RNF4-212ENST00000509258 NPC1L1Q9UHC9 1359 aa14.83□□□□□ -0.04
RNF4-212ENST00000509258 MMP10P09238 476 aa14.82□□□□□ -0.04
RNF4-212ENST00000509258 ADRA2BP18089 450 aa14.82□□□□□ -0.04
RNF4-212ENST00000509258 AMOTQ4VCS5 1084 aa14.82□□□□□ -0.04
RNF4-212ENST00000509258 WWC3Q9ULE0 1092 aa14.82□□□□□ -0.04
RNF4-212ENST00000509258 SIPA1L3O60292 1781 aaPredicted RBP14.82□□□□□ -0.04
RNF4-212ENST00000509258 CEP350Q5VT06 3117 aa14.81□□□□□ -0.04
RNF4-212ENST00000509258 TRAPPC3LQ5T215 181 aa14.81□□□□□ -0.04
RNF4-212ENST00000509258 NLGN1Q8N2Q7 840 aa14.81□□□□□ -0.04
RNF4-212ENST00000509258 RBM42Q9BTD8 480 aaKnown RBP14.81□□□□□ -0.04
RNF4-212ENST00000509258 CNTNAP4Q9C0A0 1308 aa14.81□□□□□ -0.04
RNF4-212ENST00000509258 PXDNLA1KZ92 1463 aa14.81□□□□□ -0.04
RNF4-212ENST00000509258 MRC1P22897 1456 aa14.81□□□□□ -0.04
RNF4-212ENST00000509258 KIAA1551Q9HCM1 1747 aa14.8□□□□□ -0.04
RNF4-212ENST00000509258 UBR2Q8IWV8 1755 aa14.8□□□□□ -0.04
RNF4-212ENST00000509258 CABP4P57796 275 aa14.8□□□□□ -0.04
RNF4-212ENST00000509258 C10orf71Q711Q0 1435 aa14.8□□□□□ -0.04
RNF4-212ENST00000509258 C1orf141Q5JVX7 400 aa14.79□□□□□ -0.04
RNF4-212ENST00000509258 RC3H1Q5TC82 1133 aaKnown RBP14.79□□□□□ -0.04
RNF4-212ENST00000509258 ZNF526Q8TF50 670 aaPredicted RBP14.79□□□□□ -0.04
RNF4-212ENST00000509258 LGR6Q9HBX8 967 aa14.79□□□□□ -0.04
RNF4-212ENST00000509258 KIF13BQ9NQT8 1826 aa14.79□□□□□ -0.04
RNF4-212ENST00000509258 TGFB2P61812 414 aa14.78□□□□□ -0.04
RNF4-212ENST00000509258 NFATC2IPQ8NCF5 419 aa14.78□□□□□ -0.04
RNF4-212ENST00000509258 KCPQ6ZWJ8 1503 aa14.77□□□□□ -0.04
RNF4-212ENST00000509258 DIAPH1O60610 1272 aaKnown RBP14.77□□□□□ -0.05
RNF4-212ENST00000509258 RPS6KA4O75676 772 aa14.77□□□□□ -0.05
RNF4-212ENST00000509258 RFC4P35249 363 aa14.77□□□□□ -0.05
RNF4-212ENST00000509258 MTHFSDQ2M296 383 aaKnown RBP14.77□□□□□ -0.05
RNF4-212ENST00000509258 ARHGEF1Q92888 912 aaKnown RBP14.77□□□□□ -0.05
RNF4-212ENST00000509258 N4BP2Q86UW6 1770 aaPredicted RBP14.77□□□□□ -0.05
RNF4-212ENST00000509258 GYS1P13807 737 aa14.76□□□□□ -0.05
RNF4-212ENST00000509258 CCDC87Q9NVE4 849 aa14.76□□□□□ -0.05
RNF4-212ENST00000509258 DLG5Q8TDM6 1919 aa14.75□□□□□ -0.05
RNF4-212ENST00000509258 PTCD1O75127 700 aaKnown RBP14.75□□□□□ -0.05
RNF4-212ENST00000509258 AKAP4Q5JQC9 854 aa14.75□□□□□ -0.05
RNF4-212ENST00000509258 PARP3Q9Y6F1 533 aa14.75□□□□□ -0.05
RNF4-212ENST00000509258 RNMTO43148 476 aaKnown RBP14.74□□□□□ -0.05
RNF4-212ENST00000509258 HSPA6P17066 643 aa14.74□□□□□ -0.05
RNF4-212ENST00000509258 IFFO2Q5TF58 517 aa14.74□□□□□ -0.05
RNF4-212ENST00000509258 BCS1LQ9Y276 419 aa14.74□□□□□ -0.05
RNF4-212ENST00000509258 BRCA1P38398 1863 aaKnown RBP14.74□□□□□ -0.05
RNF4-212ENST00000509258 A0A0G2JLW4 131 aa14.73□□□□□ -0.05
RNF4-212ENST00000509258 CRKLP46109 303 aaKnown RBP14.73□□□□□ -0.05
RNF4-212ENST00000509258 SLC39A6Q13433 755 aa14.73□□□□□ -0.05
RNF4-212ENST00000509258 USP42Q9H9J4 1324 aaKnown RBP14.72□□□□□ -0.05
RNF4-212ENST00000509258 U2SURPO15042 1029 aaKnown RBP14.72□□□□□ -0.05
RNF4-212ENST00000509258 PPP2R1AP30153 589 aa14.72□□□□□ -0.05
RNF4-212ENST00000509258 SLC52A2Q9HAB3 445 aa14.72□□□□□ -0.05
RNF4-212ENST00000509258 AFDNP55196 1824 aaKnown RBP14.71□□□□□ -0.05
RNF4-212ENST00000509258 KIF3CO14782 793 aa14.71□□□□□ -0.05
RNF4-212ENST00000509258 DPEP1P16444 411 aa14.71□□□□□ -0.05
RNF4-212ENST00000509258 PHACTR3Q96KR7 559 aa14.71□□□□□ -0.05
RNF4-212ENST00000509258 FCHSD2O94868 740 aa14.7□□□□□ -0.06
RNF4-212ENST00000509258 INTS5Q6P9B9 1019 aaKnown RBP14.7□□□□□ -0.06
RNF4-212ENST00000509258 DNAJC10Q8IXB1 793 aa14.7□□□□□ -0.06
RNF4-212ENST00000509258 RSPH6AQ9H0K4 717 aa14.7□□□□□ -0.06
RNF4-212ENST00000509258 ARHGAP27Q6ZUM4 889 aa14.69□□□□□ -0.06
RNF4-212ENST00000509258 IL17REQ8NFR9 667 aa14.69□□□□□ -0.06
RNF4-212ENST00000509258 SRP68Q9UHB9 627 aaKnown RBP14.69□□□□□ -0.06
RNF4-212ENST00000509258 FKBP8Q14318 412 aa14.68□□□□□ -0.06
RNF4-212ENST00000509258 PRKAR2BP31323 418 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms