RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 MKRN1Q9UHC7 482 aaKnown RBP5.63□□□□□ -1.51
RNF4-211ENST00000509206 USP47Q96K76 1375 aa5.63□□□□□ -1.51
RNF4-211ENST00000509206 TNS2Q63HR2 1409 aa5.63□□□□□ -1.51
RNF4-211ENST00000509206 PPIP5K1Q6PFW1 1433 aa5.63□□□□□ -1.51
RNF4-211ENST00000509206 AKAP12Q02952 1782 aa5.62□□□□□ -1.51
RNF4-211ENST00000509206 A0A0G2JLW4 131 aa5.62□□□□□ -1.51
RNF4-211ENST00000509206 VEGFAP15692 232 aaPredicted RBP5.62□□□□□ -1.51
RNF4-211ENST00000509206 TGFB2P61812 414 aa5.62□□□□□ -1.51
RNF4-211ENST00000509206 TPRNQ4KMQ1 711 aa5.62□□□□□ -1.51
RNF4-211ENST00000509206 ZNF467Q7Z7K2 595 aaPredicted RBP5.62□□□□□ -1.51
RNF4-211ENST00000509206 RNF181Q9P0P0 153 aa5.62□□□□□ -1.51
RNF4-211ENST00000509206 PLEKHG2Q9H7P9 1386 aa5.62□□□□□ -1.51
RNF4-211ENST00000509206 SPATA31E1Q6ZUB1 1445 aa5.62□□□□□ -1.51
RNF4-211ENST00000509206 LMO7Q8WWI1 1683 aa5.62□□□□□ -1.51
RNF4-211ENST00000509206 LBX1P52954 281 aa5.61□□□□□ -1.51
RNF4-211ENST00000509206 NBR1Q14596 966 aa5.61□□□□□ -1.51
RNF4-211ENST00000509206 PPARGC1BQ86YN6 1023 aaKnown RBP5.61□□□□□ -1.51
RNF4-211ENST00000509206 IFNL1Q8IU54 200 aa5.61□□□□□ -1.51
RNF4-211ENST00000509206 ARHGEF28Q8N1W1 1705 aaKnown RBP5.61□□□□□ -1.51
RNF4-211ENST00000509206 MPHOSPH9Q99550 1183 aa5.61□□□□□ -1.51
RNF4-211ENST00000509206 CABP2Q9NPB3 220 aa5.61□□□□□ -1.51
RNF4-211ENST00000509206 CABP1Q9NZU7 370 aa5.61□□□□□ -1.51
RNF4-211ENST00000509206 PCNTO95613 3336 aa5.61□□□□□ -1.51
RNF4-211ENST00000509206 NHSQ6T4R5 1651 aa5.6□□□□□ -1.51
RNF4-211ENST00000509206 PAPPAQ13219 1627 aa5.6□□□□□ -1.51
RNF4-211ENST00000509206 DCAF11Q8TEB1 546 aa5.6□□□□□ -1.51
RNF4-211ENST00000509206 PCDHB8Q9UN66 801 aa5.6□□□□□ -1.51
RNF4-211ENST00000509206 KCPQ6ZWJ8 1503 aa5.59□□□□□ -1.51
RNF4-211ENST00000509206 CPSF1Q10570 1443 aaKnown RBP5.59□□□□□ -1.51
RNF4-211ENST00000509206 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.59□□□□□ -1.51
RNF4-211ENST00000509206 MMP10P09238 476 aa5.59□□□□□ -1.51
RNF4-211ENST00000509206 DPEP1P16444 411 aa5.59□□□□□ -1.51
RNF4-211ENST00000509206 DALRD3Q5D0E6 543 aaKnown RBP5.59□□□□□ -1.51
RNF4-211ENST00000509206 SMIM5Q71RC9 77 aa5.59□□□□□ -1.51
RNF4-211ENST00000509206 ZCRB1Q8TBF4 217 aaKnown RBP5.59□□□□□ -1.51
RNF4-211ENST00000509206 ANKRD24Q8TF21 1146 aa5.59□□□□□ -1.51
RNF4-211ENST00000509206 LTV1Q96GA3 475 aaPredicted RBP5.59□□□□□ -1.51
RNF4-211ENST00000509206 BEGAINQ9BUH8 593 aa5.59□□□□□ -1.51
RNF4-211ENST00000509206 CCDC87Q9NVE4 849 aa5.59□□□□□ -1.51
RNF4-211ENST00000509206 PIM2Q9P1W9 311 aa5.59□□□□□ -1.51
RNF4-211ENST00000509206 ITSN1Q15811 1721 aa5.59□□□□□ -1.51
RNF4-211ENST00000509206 ANKRD36BQ8N2N9 1353 aa5.58□□□□□ -1.52
RNF4-211ENST00000509206 BTAF1O14981 1849 aa5.58□□□□□ -1.52
RNF4-211ENST00000509206 TIE1P35590 1138 aa5.58□□□□□ -1.52
RNF4-211ENST00000509206 RGS19P49795 217 aa5.58□□□□□ -1.52
RNF4-211ENST00000509206 PDAP1Q13442 181 aaKnown RBP5.58□□□□□ -1.52
RNF4-211ENST00000509206 DPY19L2Q6NUT2 758 aa5.58□□□□□ -1.52
RNF4-211ENST00000509206 PARP3Q9Y6F1 533 aa5.58□□□□□ -1.52
RNF4-211ENST00000509206 QSER1Q2KHR3 1735 aa5.57□□□□□ -1.52
RNF4-211ENST00000509206 ERBB3P21860 1342 aa5.57□□□□□ -1.52
RNF4-211ENST00000509206 TTC21BQ7Z4L5 1316 aa5.57□□□□□ -1.52
RNF4-211ENST00000509206 TRPM1Q7Z4N2 1603 aa5.57□□□□□ -1.52
RNF4-211ENST00000509206 GLTPD2A6NH11 291 aa5.57□□□□□ -1.52
RNF4-211ENST00000509206 POTEIP0CG38 1075 aa5.57□□□□□ -1.52
RNF4-211ENST00000509206 SSFA2P28290 1259 aa5.57□□□□□ -1.52
RNF4-211ENST00000509206 MPRIPQ6WCQ1 1025 aa5.57□□□□□ -1.52
RNF4-211ENST00000509206 NLGN1Q8N2Q7 840 aa5.57□□□□□ -1.52
RNF4-211ENST00000509206 SMARCC1Q92922 1105 aaPredicted RBP5.57□□□□□ -1.52
RNF4-211ENST00000509206 STAC3Q96MF2 364 aa5.57□□□□□ -1.52
RNF4-211ENST00000509206 TMEM106CQ9BVX2 250 aa5.57□□□□□ -1.52
RNF4-211ENST00000509206 BMP2KQ9NSY1 1161 aaPredicted RBP5.57□□□□□ -1.52
RNF4-211ENST00000509206 TRPC6Q9Y210 931 aa5.57□□□□□ -1.52
RNF4-211ENST00000509206 COL24A1Q17RW2 1714 aa5.57□□□□□ -1.52
RNF4-211ENST00000509206 NSD3Q9BZ95 1437 aa5.57□□□□□ -1.52
RNF4-211ENST00000509206 TTLL13PA6NNM8 815 aa5.56□□□□□ -1.52
RNF4-211ENST00000509206 GNPATO15228 680 aa5.56□□□□□ -1.52
RNF4-211ENST00000509206 ATMINO43313 823 aaPredicted RBP5.56□□□□□ -1.52
RNF4-211ENST00000509206 VEGFBP49765 207 aa5.56□□□□□ -1.52
RNF4-211ENST00000509206 TMF1P82094 1093 aa5.56□□□□□ -1.52
RNF4-211ENST00000509206 MAP2K1Q02750 393 aaPredicted RBP5.56□□□□□ -1.52
RNF4-211ENST00000509206 GOLGA2Q08379 1002 aa5.56□□□□□ -1.52
RNF4-211ENST00000509206 TRAPPC3LQ5T215 181 aa5.56□□□□□ -1.52
RNF4-211ENST00000509206 WBP1LQ9NX94 342 aa5.56□□□□□ -1.52
RNF4-211ENST00000509206 ABCC6O95255 1503 aa5.56□□□□□ -1.52
RNF4-211ENST00000509206 C10orf71Q711Q0 1435 aa5.56□□□□□ -1.52
RNF4-211ENST00000509206 TTC21AQ8NDW8 1320 aa5.55□□□□□ -1.52
RNF4-211ENST00000509206 ZC3H4Q9UPT8 1303 aaKnown RBP5.55□□□□□ -1.52
RNF4-211ENST00000509206 HSPA8P11142 646 aaKnown RBP5.55□□□□□ -1.52
RNF4-211ENST00000509206 LMNB1P20700 586 aa5.55□□□□□ -1.52
RNF4-211ENST00000509206 PSEN1P49768 467 aa5.55□□□□□ -1.52
RNF4-211ENST00000509206 ATN1P54259 1190 aaPredicted RBP5.55□□□□□ -1.52
RNF4-211ENST00000509206 ASTLQ6HA08 431 aaPredicted RBP5.55□□□□□ -1.52
RNF4-211ENST00000509206 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.55□□□□□ -1.52
RNF4-211ENST00000509206 CNTNAP1P78357 1384 aa5.55□□□□□ -1.52
RNF4-211ENST00000509206 PALLDQ8WX93 1383 aa5.55□□□□□ -1.52
RNF4-211ENST00000509206 SLIT3O75094 1523 aa5.54□□□□□ -1.52
RNF4-211ENST00000509206 PXDNLA1KZ92 1463 aa5.54□□□□□ -1.52
RNF4-211ENST00000509206 WNK3Q9BYP7 1800 aa5.54□□□□□ -1.52
RNF4-211ENST00000509206 TMEM88BA6NKF7 163 aa5.54□□□□□ -1.52
RNF4-211ENST00000509206 RFC4P35249 363 aa5.54□□□□□ -1.52
RNF4-211ENST00000509206 DEFB115Q30KQ5 88 aa5.54□□□□□ -1.52
RNF4-211ENST00000509206 RAPGEF4Q8WZA2 1011 aa5.54□□□□□ -1.52
RNF4-211ENST00000509206 DCAF5Q96JK2 942 aa5.54□□□□□ -1.52
RNF4-211ENST00000509206 TRIM35Q9UPQ4 493 aa5.54□□□□□ -1.52
RNF4-211ENST00000509206 ADGRB1O14514 1584 aa5.54□□□□□ -1.52
RNF4-211ENST00000509206 CENPJQ9HC77 1338 aaPredicted RBP5.53□□□□□ -1.52
RNF4-211ENST00000509206 COL18A1P39060 1754 aa5.53□□□□□ -1.52
RNF4-211ENST00000509206 ATP6V1AP38606 617 aa5.53□□□□□ -1.52
RNF4-211ENST00000509206 AMPHP49418 695 aa5.53□□□□□ -1.52
RNF4-211ENST00000509206 GRM1Q13255 1194 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms