RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 SGIP1Q9BQI5 828 aa25.05■■□□□ 1.6
UBE3D-207ENST00000509102 NUDCQ9Y266 331 aa25.05■■□□□ 1.6
UBE3D-207ENST00000509102 TAF1LQ8IZX4 1826 aa25.05■■□□□ 1.6
UBE3D-207ENST00000509102 TUBGCP6Q96RT7 1819 aa25.05■■□□□ 1.6
UBE3D-207ENST00000509102 C4BP0C0L5 1744 aa25.04■■□□□ 1.6
UBE3D-207ENST00000509102 COL3A1P02461 1466 aaPredicted RBP25.03■■□□□ 1.6
UBE3D-207ENST00000509102 COL23A1Q86Y22 540 aaPredicted RBP25.03■■□□□ 1.6
UBE3D-207ENST00000509102 RBM42Q9BTD8 480 aaKnown RBP25.03■■□□□ 1.6
UBE3D-207ENST00000509102 FHDC1Q9C0D6 1143 aaPredicted RBP25.03■■□□□ 1.6
UBE3D-207ENST00000509102 NFATC2IPQ8NCF5 419 aa25.01■■□□□ 1.59
UBE3D-207ENST00000509102 PPP2R1AP30153 589 aa25■■□□□ 1.59
UBE3D-207ENST00000509102 LINC00116Q8NCU8 138 aa25■■□□□ 1.59
UBE3D-207ENST00000509102 SYT17Q9BSW7 474 aa25■■□□□ 1.59
UBE3D-207ENST00000509102 PHF14O94880 888 aa24.99■■□□□ 1.59
UBE3D-207ENST00000509102 SSFA2P28290 1259 aa24.99■■□□□ 1.59
UBE3D-207ENST00000509102 MTHFSDQ2M296 383 aaKnown RBP24.99■■□□□ 1.59
UBE3D-207ENST00000509102 GNPATO15228 680 aa24.98■■□□□ 1.59
UBE3D-207ENST00000509102 ITPK1Q13572 414 aa24.98■■□□□ 1.59
UBE3D-207ENST00000509102 KLHL34Q8N239 644 aa24.98■■□□□ 1.59
UBE3D-207ENST00000509102 GAS2L2Q8NHY3 880 aa24.98■■□□□ 1.59
UBE3D-207ENST00000509102 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.97■■□□□ 1.59
UBE3D-207ENST00000509102 MAP3K5Q99683 1374 aa24.96■■□□□ 1.59
UBE3D-207ENST00000509102 SCN11AQ9UI33 1791 aa24.96■■□□□ 1.59
UBE3D-207ENST00000509102 SLC52A2Q9HAB3 445 aa24.96■■□□□ 1.59
UBE3D-207ENST00000509102 RNMTO43148 476 aaKnown RBP24.95■■□□□ 1.58
UBE3D-207ENST00000509102 PTCD1O75127 700 aaKnown RBP24.95■■□□□ 1.58
UBE3D-207ENST00000509102 ZNF831Q5JPB2 1677 aa24.94■■□□□ 1.58
UBE3D-207ENST00000509102 MSL1Q68DK7 614 aa24.94■■□□□ 1.58
UBE3D-207ENST00000509102 RTCBQ9Y3I0 505 aaKnown RBP24.94■■□□□ 1.58
UBE3D-207ENST00000509102 COL24A1Q17RW2 1714 aa24.93■■□□□ 1.58
UBE3D-207ENST00000509102 U2AF1L5P0DN76 240 aaPredicted RBP24.93■■□□□ 1.58
UBE3D-207ENST00000509102 U2AF1Q01081 240 aaKnown RBP eCLIP24.93■■□□□ 1.58
UBE3D-207ENST00000509102 LGR6Q9HBX8 967 aa24.93■■□□□ 1.58
UBE3D-207ENST00000509102 UBR3Q6ZT12 1888 aa24.92■■□□□ 1.58
UBE3D-207ENST00000509102 GNAT3A8MTJ3 354 aa24.92■■□□□ 1.58
UBE3D-207ENST00000509102 RC3H1Q5TC82 1133 aaKnown RBP24.92■■□□□ 1.58
UBE3D-207ENST00000509102 PRKAR2BP31323 418 aa24.91■■□□□ 1.58
UBE3D-207ENST00000509102 MRC1P22897 1456 aa24.9■■□□□ 1.58
UBE3D-207ENST00000509102 CNTNAP4Q9C0A0 1308 aa24.9■■□□□ 1.58
UBE3D-207ENST00000509102 TRAPPC3LQ5T215 181 aa24.9■■□□□ 1.58
UBE3D-207ENST00000509102 SLC4A9Q96Q91 983 aa24.9■■□□□ 1.58
UBE3D-207ENST00000509102 NEFMP07197 916 aa24.89■■□□□ 1.58
UBE3D-207ENST00000509102 TEFQ10587 303 aa24.89■■□□□ 1.58
UBE3D-207ENST00000509102 RSPH6AQ9H0K4 717 aa24.89■■□□□ 1.58
UBE3D-207ENST00000509102 FCHSD2O94868 740 aa24.88■■□□□ 1.57
UBE3D-207ENST00000509102 AMIGO3Q86WK7 504 aa24.88■■□□□ 1.57
UBE3D-207ENST00000509102 TTC5Q8N0Z6 440 aa24.87■■□□□ 1.57
UBE3D-207ENST00000509102 SMIM5Q71RC9 77 aa24.86■■□□□ 1.57
UBE3D-207ENST00000509102 COL5A3P25940 1745 aaPredicted RBP24.86■■□□□ 1.57
UBE3D-207ENST00000509102 RPS6KA4O75676 772 aa24.85■■□□□ 1.57
UBE3D-207ENST00000509102 RFC4P35249 363 aa24.85■■□□□ 1.57
UBE3D-207ENST00000509102 ADAMTS7Q9UKP4 1686 aa24.85■■□□□ 1.57
UBE3D-207ENST00000509102 VIRMAQ69YN4 1812 aaKnown RBP24.84■■□□□ 1.57
UBE3D-207ENST00000509102 CRKLP46109 303 aaKnown RBP24.84■■□□□ 1.57
UBE3D-207ENST00000509102 DDX10Q13206 875 aaKnown RBP24.84■■□□□ 1.57
UBE3D-207ENST00000509102 RALBP1Q15311 655 aa24.84■■□□□ 1.57
UBE3D-207ENST00000509102 RTF1Q92541 710 aaKnown RBP24.84■■□□□ 1.57
UBE3D-207ENST00000509102 ZEB1P37275 1124 aaPredicted RBP24.83■■□□□ 1.57
UBE3D-207ENST00000509102 SLC39A6Q13433 755 aa24.83■■□□□ 1.57
UBE3D-207ENST00000509102 GPR162Q16538 588 aa24.83■■□□□ 1.57
UBE3D-207ENST00000509102 PHACTR3Q96KR7 559 aa24.83■■□□□ 1.57
UBE3D-207ENST00000509102 YY1P25490 414 aa24.82■■□□□ 1.56
UBE3D-207ENST00000509102 CD2APQ9Y5K6 639 aa24.82■■□□□ 1.56
UBE3D-207ENST00000509102 VSIG10Q8N0Z9 540 aa24.81■■□□□ 1.56
UBE3D-207ENST00000509102 NLGN1Q8N2Q7 840 aa24.81■■□□□ 1.56
UBE3D-207ENST00000509102 ARHGEF1Q92888 912 aaKnown RBP24.81■■□□□ 1.56
UBE3D-207ENST00000509102 PNNQ9H307 717 aaKnown RBP24.81■■□□□ 1.56
UBE3D-207ENST00000509102 CICQ96RK0 1608 aaPredicted RBP24.81■■□□□ 1.56
UBE3D-207ENST00000509102 PELP1Q8IZL8 1130 aaKnown RBP24.8■■□□□ 1.56
UBE3D-207ENST00000509102 IL17REQ8NFR9 667 aa24.8■■□□□ 1.56
UBE3D-207ENST00000509102 DNAJC10Q8IXB1 793 aa24.79■■□□□ 1.56
UBE3D-207ENST00000509102 CCDC87Q9NVE4 849 aa24.79■■□□□ 1.56
UBE3D-207ENST00000509102 TJP1Q07157 1748 aa24.78■■□□□ 1.56
UBE3D-207ENST00000509102 NLGN2Q8NFZ4 835 aa24.78■■□□□ 1.56
UBE3D-207ENST00000509102 CEMIPQ8WUJ3 1361 aa24.77■■□□□ 1.56
UBE3D-207ENST00000509102 KCPQ6ZWJ8 1503 aa24.76■■□□□ 1.55
UBE3D-207ENST00000509102 STARD3NLO95772 234 aa24.76■■□□□ 1.55
UBE3D-207ENST00000509102 MMP10P09238 476 aa24.76■■□□□ 1.55
UBE3D-207ENST00000509102 ZNF790Q6PG37 636 aa24.76■■□□□ 1.55
UBE3D-207ENST00000509102 BTBD11A6QL63 1104 aa24.75■■□□□ 1.55
UBE3D-207ENST00000509102 HTATSF1O43719 755 aaKnown RBP24.75■■□□□ 1.55
UBE3D-207ENST00000509102 TEX13AQ9BXU3 409 aaPredicted RBP24.75■■□□□ 1.55
UBE3D-207ENST00000509102 MYH14Q7Z406 1995 aaKnown RBP24.74■■□□□ 1.55
UBE3D-207ENST00000509102 CYP19A1P11511 503 aaPredicted RBP24.74■■□□□ 1.55
UBE3D-207ENST00000509102 INTS5Q6P9B9 1019 aaKnown RBP24.74■■□□□ 1.55
UBE3D-207ENST00000509102 FMNL2Q96PY5 1086 aa24.74■■□□□ 1.55
UBE3D-207ENST00000509102 MAPK8IP3Q9UPT6 1336 aa24.74■■□□□ 1.55
UBE3D-207ENST00000509102 ZPR1O75312 459 aa24.73■■□□□ 1.55
UBE3D-207ENST00000509102 GYS1P13807 737 aa24.73■■□□□ 1.55
UBE3D-207ENST00000509102 PARP3Q9Y6F1 533 aa24.72■■□□□ 1.55
UBE3D-207ENST00000509102 UBR2Q8IWV8 1755 aa24.72■■□□□ 1.55
UBE3D-207ENST00000509102 HEG1Q9ULI3 1381 aa24.71■■□□□ 1.55
UBE3D-207ENST00000509102 MYBBP1AQ9BQG0 1328 aaKnown RBP24.71■■□□□ 1.55
UBE3D-207ENST00000509102 USP42Q9H9J4 1324 aaKnown RBP24.71■■□□□ 1.55
UBE3D-207ENST00000509102 GRIN3BO60391 1043 aa24.71■■□□□ 1.55
UBE3D-207ENST00000509102 MCM10Q7L590 875 aa24.71■■□□□ 1.55
UBE3D-207ENST00000509102 ZNF496Q96IT1 587 aaPredicted RBP24.71■■□□□ 1.55
UBE3D-207ENST00000509102 C4AP0C0L4 1744 aa24.7■■□□□ 1.54
UBE3D-207ENST00000509102 SOS1Q07889 1333 aaPredicted RBP24.7■■□□□ 1.54
UBE3D-207ENST00000509102 NPM2Q86SE8 214 aaKnown RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms