RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 UTRNP46939 3433 aa17.03■□□□□ 0.32
PDPN-208ENST00000509009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.02■□□□□ 0.32
PDPN-208ENST00000509009 PHF14O94880 888 aa17.01■□□□□ 0.31
PDPN-208ENST00000509009 SLC4A9Q96Q91 983 aa17.01■□□□□ 0.31
PDPN-208ENST00000509009 C5P01031 1676 aa17.01■□□□□ 0.31
PDPN-208ENST00000509009 SSFA2P28290 1259 aa17■□□□□ 0.31
PDPN-208ENST00000509009 CABP4P57796 275 aa17■□□□□ 0.31
PDPN-208ENST00000509009 TAF1LQ8IZX4 1826 aa16.99■□□□□ 0.31
PDPN-208ENST00000509009 C1orf141Q5JVX7 400 aa16.99■□□□□ 0.31
PDPN-208ENST00000509009 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
PDPN-208ENST00000509009 RBM42Q9BTD8 480 aaKnown RBP16.99■□□□□ 0.31
PDPN-208ENST00000509009 KDRP35968 1356 aa16.99■□□□□ 0.31
PDPN-208ENST00000509009 C4BP0C0L5 1744 aa16.99■□□□□ 0.31
PDPN-208ENST00000509009 GNPATO15228 680 aa16.98■□□□□ 0.31
PDPN-208ENST00000509009 PELP1Q8IZL8 1130 aaKnown RBP16.98■□□□□ 0.31
PDPN-208ENST00000509009 ZNF784Q8NCA9 323 aaPredicted RBP16.98■□□□□ 0.31
PDPN-208ENST00000509009 NFATC2IPQ8NCF5 419 aa16.98■□□□□ 0.31
PDPN-208ENST00000509009 CD2APQ9Y5K6 639 aa16.98■□□□□ 0.31
PDPN-208ENST00000509009 KDM6AO15550 1401 aaPredicted RBP16.97■□□□□ 0.31
PDPN-208ENST00000509009 RC3H1Q5TC82 1133 aaKnown RBP16.97■□□□□ 0.31
PDPN-208ENST00000509009 HMOX1P09601 288 aa16.95■□□□□ 0.3
PDPN-208ENST00000509009 YBX3P16989 372 aaKnown RBP eCLIP16.95■□□□□ 0.3
PDPN-208ENST00000509009 TRAPPC3LQ5T215 181 aa16.95■□□□□ 0.3
PDPN-208ENST00000509009 DIAPH1O60610 1272 aaKnown RBP16.94■□□□□ 0.3
PDPN-208ENST00000509009 PTCD1O75127 700 aaKnown RBP16.94■□□□□ 0.3
PDPN-208ENST00000509009 AKAP4Q5JQC9 854 aa16.94■□□□□ 0.3
PDPN-208ENST00000509009 LGR6Q9HBX8 967 aa16.94■□□□□ 0.3
PDPN-208ENST00000509009 RTCBQ9Y3I0 505 aaKnown RBP16.94■□□□□ 0.3
PDPN-208ENST00000509009 GOLGB1Q14789 3259 aaKnown RBP16.94■□□□□ 0.3
PDPN-208ENST00000509009 GRIN3BO60391 1043 aa16.93■□□□□ 0.3
PDPN-208ENST00000509009 RPS6KA4O75676 772 aa16.93■□□□□ 0.3
PDPN-208ENST00000509009 UBR3Q6ZT12 1888 aa16.93■□□□□ 0.3
PDPN-208ENST00000509009 NPC1L1Q9UHC9 1359 aa16.92■□□□□ 0.3
PDPN-208ENST00000509009 CNGB1Q14028 1251 aaPredicted RBP16.92■□□□□ 0.3
PDPN-208ENST00000509009 ARHGEF1Q92888 912 aaKnown RBP16.92■□□□□ 0.3
PDPN-208ENST00000509009 MTHFSDQ2M296 383 aaKnown RBP16.91■□□□□ 0.3
PDPN-208ENST00000509009 CNTNAP4Q9C0A0 1308 aa16.91■□□□□ 0.3
PDPN-208ENST00000509009 RNMTO43148 476 aaKnown RBP16.9■□□□□ 0.3
PDPN-208ENST00000509009 MMP10P09238 476 aa16.9■□□□□ 0.3
PDPN-208ENST00000509009 ADRA2BP18089 450 aa16.9■□□□□ 0.3
PDPN-208ENST00000509009 NLGN1Q8N2Q7 840 aa16.9■□□□□ 0.3
PDPN-208ENST00000509009 SLC52A2Q9HAB3 445 aa16.9■□□□□ 0.3
PDPN-208ENST00000509009 CHD4Q14839 1912 aa16.9■□□□□ 0.3
PDPN-208ENST00000509009 RFC4P35249 363 aa16.88■□□□□ 0.29
PDPN-208ENST00000509009 CRKLP46109 303 aaKnown RBP16.88■□□□□ 0.29
PDPN-208ENST00000509009 GYS1P13807 737 aa16.87■□□□□ 0.29
PDPN-208ENST00000509009 ZNF831Q5JPB2 1677 aa16.86■□□□□ 0.29
PDPN-208ENST00000509009 SLC39A6Q13433 755 aa16.86■□□□□ 0.29
PDPN-208ENST00000509009 INTS5Q6P9B9 1019 aaKnown RBP16.86■□□□□ 0.29
PDPN-208ENST00000509009 U2SURPO15042 1029 aaKnown RBP16.85■□□□□ 0.29
PDPN-208ENST00000509009 DNAJC10Q8IXB1 793 aa16.85■□□□□ 0.29
PDPN-208ENST00000509009 WWC3Q9ULE0 1092 aa16.84■□□□□ 0.29
PDPN-208ENST00000509009 MYH14Q7Z406 1995 aaKnown RBP16.84■□□□□ 0.29
PDPN-208ENST00000509009 COL3A1P02461 1466 aaPredicted RBP16.82■□□□□ 0.28
PDPN-208ENST00000509009 CYP19A1P11511 503 aaPredicted RBP16.82■□□□□ 0.28
PDPN-208ENST00000509009 TGFB2P61812 414 aa16.82■□□□□ 0.28
PDPN-208ENST00000509009 IL17REQ8NFR9 667 aa16.82■□□□□ 0.28
PDPN-208ENST00000509009 CCDC87Q9NVE4 849 aa16.82■□□□□ 0.28
PDPN-208ENST00000509009 SRP68Q9UHB9 627 aaKnown RBP16.82■□□□□ 0.28
PDPN-208ENST00000509009 PARP3Q9Y6F1 533 aa16.82■□□□□ 0.28
PDPN-208ENST00000509009 SCN11AQ9UI33 1791 aa16.82■□□□□ 0.28
PDPN-208ENST00000509009 A0A0G2JLW4 131 aa16.81■□□□□ 0.28
PDPN-208ENST00000509009 FKBP8Q14318 412 aa16.81■□□□□ 0.28
PDPN-208ENST00000509009 USP42Q9H9J4 1324 aaKnown RBP16.8■□□□□ 0.28
PDPN-208ENST00000509009 COL5A3P25940 1745 aaPredicted RBP16.8■□□□□ 0.28
PDPN-208ENST00000509009 GNAT3A8MTJ3 354 aa16.8■□□□□ 0.28
PDPN-208ENST00000509009 VSIG10Q8N0Z9 540 aa16.8■□□□□ 0.28
PDPN-208ENST00000509009 GAS2L2Q8NHY3 880 aa16.8■□□□□ 0.28
PDPN-208ENST00000509009 PHACTR3Q96KR7 559 aa16.8■□□□□ 0.28
PDPN-208ENST00000509009 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
PDPN-208ENST00000509009 PPP2R1AP30153 589 aa16.79■□□□□ 0.28
PDPN-208ENST00000509009 TM4SF1P30408 202 aa16.79■□□□□ 0.28
PDPN-208ENST00000509009 C1QTNF8P60827 252 aa16.79■□□□□ 0.28
PDPN-208ENST00000509009 DPEP1P16444 411 aa16.78■□□□□ 0.28
PDPN-208ENST00000509009 RSPH6AQ9H0K4 717 aa16.78■□□□□ 0.28
PDPN-208ENST00000509009 NUDCQ9Y266 331 aa16.78■□□□□ 0.28
PDPN-208ENST00000509009 MRC1P22897 1456 aa16.78■□□□□ 0.28
PDPN-208ENST00000509009 SOS1Q07889 1333 aaPredicted RBP16.77■□□□□ 0.28
PDPN-208ENST00000509009 ZPR1O75312 459 aa16.77■□□□□ 0.28
PDPN-208ENST00000509009 PRKAR2BP31323 418 aa16.77■□□□□ 0.28
PDPN-208ENST00000509009 DDR1Q08345 913 aa16.77■□□□□ 0.28
PDPN-208ENST00000509009 TEFQ10587 303 aa16.77■□□□□ 0.28
PDPN-208ENST00000509009 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
PDPN-208ENST00000509009 KCNA3P22001 575 aa16.76■□□□□ 0.27
PDPN-208ENST00000509009 USPL1Q5W0Q7 1092 aa16.76■□□□□ 0.27
PDPN-208ENST00000509009 NARFQ9UHQ1 456 aa16.76■□□□□ 0.27
PDPN-208ENST00000509009 GIGYF1O75420 1035 aaPredicted RBP16.75■□□□□ 0.27
PDPN-208ENST00000509009 ZNF790Q6PG37 636 aa16.75■□□□□ 0.27
PDPN-208ENST00000509009 TTC5Q8N0Z6 440 aa16.75■□□□□ 0.27
PDPN-208ENST00000509009 ZNF496Q96IT1 587 aaPredicted RBP16.75■□□□□ 0.27
PDPN-208ENST00000509009 BCS1LQ9Y276 419 aa16.75■□□□□ 0.27
PDPN-208ENST00000509009 ZBTB1Q9Y2K1 713 aa16.75■□□□□ 0.27
PDPN-208ENST00000509009 C10orf71Q711Q0 1435 aa16.75■□□□□ 0.27
PDPN-208ENST00000509009 TJP1Q07157 1748 aa16.75■□□□□ 0.27
PDPN-208ENST00000509009 KCPQ6ZWJ8 1503 aa16.75■□□□□ 0.27
PDPN-208ENST00000509009 ADAMTS7Q9UKP4 1686 aa16.75■□□□□ 0.27
PDPN-208ENST00000509009 CICQ96RK0 1608 aaPredicted RBP16.74■□□□□ 0.27
PDPN-208ENST00000509009 POLRMTO00411 1230 aaKnown RBP16.74■□□□□ 0.27
PDPN-208ENST00000509009 FCHSD2O94868 740 aa16.74■□□□□ 0.27
PDPN-208ENST00000509009 STARD3NLO95772 234 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms