RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 TRAPPC3LQ5T215 181 aa13.8□□□□□ -0.2
SH3D21-206ENST00000508854 ZNF526Q8TF50 670 aaPredicted RBP13.8□□□□□ -0.2
SH3D21-206ENST00000508854 POLKQ9UBT6 870 aa13.8□□□□□ -0.2
SH3D21-206ENST00000508854 ANKRD26Q9UPS8 1709 aa13.8□□□□□ -0.2
SH3D21-206ENST00000508854 MMP10P09238 476 aa13.79□□□□□ -0.2
SH3D21-206ENST00000508854 AMIGO3Q86WK7 504 aa13.79□□□□□ -0.2
SH3D21-206ENST00000508854 ATG3Q9NT62 314 aa13.79□□□□□ -0.2
SH3D21-206ENST00000508854 ITPK1Q13572 414 aa13.78□□□□□ -0.2
SH3D21-206ENST00000508854 PLEKHO1Q53GL0 409 aaPredicted RBP13.78□□□□□ -0.2
SH3D21-206ENST00000508854 RC3H1Q5TC82 1133 aaKnown RBP13.78□□□□□ -0.2
SH3D21-206ENST00000508854 TRIM26Q12899 539 aaPredicted RBP13.77□□□□□ -0.21
SH3D21-206ENST00000508854 EIF4A2Q14240 407 aaKnown RBP13.77□□□□□ -0.21
SH3D21-206ENST00000508854 AMOTQ4VCS5 1084 aa13.77□□□□□ -0.21
SH3D21-206ENST00000508854 DCAF5Q96JK2 942 aa13.77□□□□□ -0.21
SH3D21-206ENST00000508854 CCDC87Q9NVE4 849 aa13.77□□□□□ -0.21
SH3D21-206ENST00000508854 RFC4P35249 363 aa13.76□□□□□ -0.21
SH3D21-206ENST00000508854 SMIM5Q71RC9 77 aa13.76□□□□□ -0.21
SH3D21-206ENST00000508854 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
SH3D21-206ENST00000508854 ZNF831Q5JPB2 1677 aa13.75□□□□□ -0.21
SH3D21-206ENST00000508854 CNTNAP4Q9C0A0 1308 aa13.75□□□□□ -0.21
SH3D21-206ENST00000508854 WWC3Q9ULE0 1092 aa13.75□□□□□ -0.21
SH3D21-206ENST00000508854 PARP3Q9Y6F1 533 aa13.75□□□□□ -0.21
SH3D21-206ENST00000508854 RPS6KA4O75676 772 aa13.74□□□□□ -0.21
SH3D21-206ENST00000508854 TNNT2P45379 298 aaPredicted RBP13.74□□□□□ -0.21
SH3D21-206ENST00000508854 CABP4P57796 275 aa13.74□□□□□ -0.21
SH3D21-206ENST00000508854 ARHGEF1Q92888 912 aaKnown RBP13.74□□□□□ -0.21
SH3D21-206ENST00000508854 POLR3GLQ9BT43 218 aa13.74□□□□□ -0.21
SH3D21-206ENST00000508854 BCS1LQ9Y276 419 aa13.74□□□□□ -0.21
SH3D21-206ENST00000508854 KIF13BQ9NQT8 1826 aa13.74□□□□□ -0.21
SH3D21-206ENST00000508854 KDRP35968 1356 aa13.73□□□□□ -0.21
SH3D21-206ENST00000508854 CLSPNQ9HAW4 1339 aa13.73□□□□□ -0.21
SH3D21-206ENST00000508854 CICQ96RK0 1608 aaPredicted RBP13.73□□□□□ -0.21
SH3D21-206ENST00000508854 KIF3CO14782 793 aa13.73□□□□□ -0.21
SH3D21-206ENST00000508854 APLP1P51693 650 aa13.73□□□□□ -0.21
SH3D21-206ENST00000508854 C1orf141Q5JVX7 400 aa13.73□□□□□ -0.21
SH3D21-206ENST00000508854 ARHGAP27Q6ZUM4 889 aa13.73□□□□□ -0.21
SH3D21-206ENST00000508854 PXDNLA1KZ92 1463 aa13.73□□□□□ -0.21
SH3D21-206ENST00000508854 A0A0G2JLW4 131 aa13.72□□□□□ -0.21
SH3D21-206ENST00000508854 TOMM70O94826 608 aa13.72□□□□□ -0.21
SH3D21-206ENST00000508854 MTHFSP49914 203 aa13.72□□□□□ -0.21
SH3D21-206ENST00000508854 ZNF530Q6P9A1 599 aaPredicted RBP13.72□□□□□ -0.21
SH3D21-206ENST00000508854 FCHSD2O94868 740 aa13.71□□□□□ -0.21
SH3D21-206ENST00000508854 GYS1P13807 737 aa13.71□□□□□ -0.21
SH3D21-206ENST00000508854 C10orf71Q711Q0 1435 aa13.71□□□□□ -0.22
SH3D21-206ENST00000508854 SLC4A9Q96Q91 983 aa13.7□□□□□ -0.22
SH3D21-206ENST00000508854 PIM2Q9P1W9 311 aa13.7□□□□□ -0.22
SH3D21-206ENST00000508854 DPEP1P16444 411 aa13.69□□□□□ -0.22
SH3D21-206ENST00000508854 EIF4G2P78344 907 aaKnown RBP eCLIP13.69□□□□□ -0.22
SH3D21-206ENST00000508854 C16orf71Q8IYS4 520 aaPredicted RBP13.69□□□□□ -0.22
SH3D21-206ENST00000508854 PANK3Q9H999 370 aa13.69□□□□□ -0.22
SH3D21-206ENST00000508854 C4AP0C0L4 1744 aa13.69□□□□□ -0.22
SH3D21-206ENST00000508854 N4BP2Q86UW6 1770 aaPredicted RBP13.68□□□□□ -0.22
SH3D21-206ENST00000508854 COL5A3P25940 1745 aaPredicted RBP13.68□□□□□ -0.22
SH3D21-206ENST00000508854 PTCD1O75127 700 aaKnown RBP13.68□□□□□ -0.22
SH3D21-206ENST00000508854 MORC1Q86VD1 984 aa13.68□□□□□ -0.22
SH3D21-206ENST00000508854 NFATC2IPQ8NCF5 419 aa13.68□□□□□ -0.22
SH3D21-206ENST00000508854 CRKLP46109 303 aaKnown RBP13.67□□□□□ -0.22
SH3D21-206ENST00000508854 DALRD3Q5D0E6 543 aaKnown RBP13.67□□□□□ -0.22
SH3D21-206ENST00000508854 KDM2BQ8NHM5 1336 aa13.66□□□□□ -0.22
SH3D21-206ENST00000508854 KDM6AO15550 1401 aaPredicted RBP13.66□□□□□ -0.22
SH3D21-206ENST00000508854 RBM46Q8TBY0 533 aaKnown RBP13.66□□□□□ -0.22
SH3D21-206ENST00000508854 KIAA1551Q9HCM1 1747 aa13.66□□□□□ -0.22
SH3D21-206ENST00000508854 USP42Q9H9J4 1324 aaKnown RBP13.65□□□□□ -0.22
SH3D21-206ENST00000508854 ZPR1O75312 459 aa13.65□□□□□ -0.22
SH3D21-206ENST00000508854 C9orf131Q5VYM1 1079 aa13.65□□□□□ -0.22
SH3D21-206ENST00000508854 SULT6B1Q6IMI4 303 aa13.65□□□□□ -0.22
SH3D21-206ENST00000508854 KNSTRNQ9Y448 316 aa13.65□□□□□ -0.22
SH3D21-206ENST00000508854 KCNA3P22001 575 aa13.64□□□□□ -0.23
SH3D21-206ENST00000508854 FSTL1Q12841 308 aa13.64□□□□□ -0.23
SH3D21-206ENST00000508854 AKAP4Q5JQC9 854 aa13.64□□□□□ -0.23
SH3D21-206ENST00000508854 ARFGEF1Q9Y6D6 1849 aa13.64□□□□□ -0.23
SH3D21-206ENST00000508854 MYH14Q7Z406 1995 aaKnown RBP13.63□□□□□ -0.23
SH3D21-206ENST00000508854 BRCA1P38398 1863 aaKnown RBP13.63□□□□□ -0.23
SH3D21-206ENST00000508854 FKBP8Q14318 412 aa13.63□□□□□ -0.23
SH3D21-206ENST00000508854 NMRK2Q9NPI5 230 aa13.63□□□□□ -0.23
SH3D21-206ENST00000508854 HSPA5P11021 654 aaKnown RBP13.62□□□□□ -0.23
SH3D21-206ENST00000508854 TM4SF1P30408 202 aa13.62□□□□□ -0.23
SH3D21-206ENST00000508854 INTS5Q6P9B9 1019 aaKnown RBP13.62□□□□□ -0.23
SH3D21-206ENST00000508854 AEBP1Q8IUX7 1158 aa13.62□□□□□ -0.23
SH3D21-206ENST00000508854 DNAJC5GQ8N7S2 189 aa13.62□□□□□ -0.23
SH3D21-206ENST00000508854 SRP68Q9UHB9 627 aaKnown RBP13.62□□□□□ -0.23
SH3D21-206ENST00000508854 IL13P35225 146 aa13.61□□□□□ -0.23
SH3D21-206ENST00000508854 PCGF6Q9BYE7 350 aa13.61□□□□□ -0.23
SH3D21-206ENST00000508854 SLC52A2Q9HAB3 445 aa13.61□□□□□ -0.23
SH3D21-206ENST00000508854 RNF181Q9P0P0 153 aa13.61□□□□□ -0.23
SH3D21-206ENST00000508854 ZC3H4Q9UPT8 1303 aaKnown RBP13.61□□□□□ -0.23
SH3D21-206ENST00000508854 POLRMTO00411 1230 aaKnown RBP13.6□□□□□ -0.23
SH3D21-206ENST00000508854 DDR1Q08345 913 aa13.6□□□□□ -0.23
SH3D21-206ENST00000508854 SCN11AQ9UI33 1791 aa13.6□□□□□ -0.23
SH3D21-206ENST00000508854 USPL1Q5W0Q7 1092 aa13.59□□□□□ -0.23
SH3D21-206ENST00000508854 VSIG10Q8N0Z9 540 aa13.59□□□□□ -0.23
SH3D21-206ENST00000508854 NARFQ9UHQ1 456 aa13.59□□□□□ -0.23
SH3D21-206ENST00000508854 CYP19A1P11511 503 aaPredicted RBP13.58□□□□□ -0.24
SH3D21-206ENST00000508854 CHRNA5P30532 468 aa13.58□□□□□ -0.24
SH3D21-206ENST00000508854 DNAJC10Q8IXB1 793 aa13.58□□□□□ -0.24
SH3D21-206ENST00000508854 RRAGCQ9HB90 399 aa13.58□□□□□ -0.24
SH3D21-206ENST00000508854 TJP1Q07157 1748 aa13.58□□□□□ -0.24
SH3D21-206ENST00000508854 SOS1Q07889 1333 aaPredicted RBP13.58□□□□□ -0.24
SH3D21-206ENST00000508854 RNMTO43148 476 aaKnown RBP13.57□□□□□ -0.24
SH3D21-206ENST00000508854 STARD3NLO95772 234 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms